RNA–Protein interactions for RNA: ENST00000503360.1

HMGB1P35-201, Transcript of high mobility group box 1 pseudogene 35, humanhuman

BASIC

Gene HMGB1P35, Length 598 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P35-201ENST00000503360 LINC01587Q99440 93 aa1.48□□□□□ -2.17
HMGB1P35-201ENST00000503360 SIGMAR1Q99720 223 aa1.48□□□□□ -2.17
HMGB1P35-201ENST00000503360 KIFC1Q9BW19 673 aa1.48□□□□□ -2.17
HMGB1P35-201ENST00000503360 GGTLC1Q9BX51 225 aa1.48□□□□□ -2.17
HMGB1P35-201ENST00000503360 OR52D1Q9H346 318 aa1.48□□□□□ -2.17
HMGB1P35-201ENST00000503360 TRABDQ9H4I3 376 aa1.48□□□□□ -2.17
HMGB1P35-201ENST00000503360 HMG20AQ9NP66 347 aa1.48□□□□□ -2.17
HMGB1P35-201ENST00000503360 C8orf4Q9NR00 106 aa1.48□□□□□ -2.17
HMGB1P35-201ENST00000503360 BATF3Q9NR55 127 aa1.48□□□□□ -2.17
HMGB1P35-201ENST00000503360 C19orf12Q9NSK7 152 aa1.48□□□□□ -2.17
HMGB1P35-201ENST00000503360 DOK5Q9P104 306 aa1.48□□□□□ -2.17
HMGB1P35-201ENST00000503360 ZNF222Q9UK12 451 aa1.48□□□□□ -2.17
HMGB1P35-201ENST00000503360 SLC22A7Q9Y694 548 aa1.48□□□□□ -2.17
HMGB1P35-201ENST00000503360 LRP4O75096 1905 aa1.48□□□□□ -2.17
HMGB1P35-201ENST00000503360 HIVEP2P31629 2446 aa1.47□□□□□ -2.17
HMGB1P35-201ENST00000503360 TRAV8-1A0A0A6YYK1 113 aa1.47□□□□□ -2.17
HMGB1P35-201ENST00000503360 IGHV3-72A0A0B4J1Y9 119 aa1.47□□□□□ -2.17
HMGB1P35-201ENST00000503360 IGHV7-4-1A0A0J9YVY3 117 aa1.47□□□□□ -2.17
HMGB1P35-201ENST00000503360 A0A1B0GVX0 72 aa1.47□□□□□ -2.17
HMGB1P35-201ENST00000503360 A0A1W2PP18 115 aa1.47□□□□□ -2.17
HMGB1P35-201ENST00000503360 C2orf74A8MZ97 194 aa1.47□□□□□ -2.17
HMGB1P35-201ENST00000503360 C15orf65H3BRN8 121 aa1.47□□□□□ -2.17
HMGB1P35-201ENST00000503360 H3BSA7 217 aa1.47□□□□□ -2.17
HMGB1P35-201ENST00000503360 BPY2O14599 106 aa1.47□□□□□ -2.17
HMGB1P35-201ENST00000503360 SOCS1O15524 211 aa1.47□□□□□ -2.17
HMGB1P35-201ENST00000503360 CHP2O43745 196 aa1.47□□□□□ -2.17
HMGB1P35-201ENST00000503360 ZNF324O75467 553 aaPredicted RBP1.47□□□□□ -2.17
HMGB1P35-201ENST00000503360 SCO1O75880 301 aa1.47□□□□□ -2.17
HMGB1P35-201ENST00000503360 OR7C1O76099 320 aaPredicted RBP1.47□□□□□ -2.17
HMGB1P35-201ENST00000503360 YIF1AO95070 293 aa1.47□□□□□ -2.17
HMGB1P35-201ENST00000503360 IGLV2-8P01709 118 aa1.47□□□□□ -2.17
HMGB1P35-201ENST00000503360 MAS1P04201 325 aa1.47□□□□□ -2.17
HMGB1P35-201ENST00000503360 CRYBA1P05813 215 aa1.47□□□□□ -2.17
HMGB1P35-201ENST00000503360 ZNF688P0C7X2 276 aa1.47□□□□□ -2.17
HMGB1P35-201ENST00000503360 FAM228BP0C875 321 aa1.47□□□□□ -2.17
HMGB1P35-201ENST00000503360 CTSEP14091 401 aa1.47□□□□□ -2.17
HMGB1P35-201ENST00000503360 CD36P16671 472 aa1.47□□□□□ -2.17
HMGB1P35-201ENST00000503360 CXCL2P19875 107 aa1.47□□□□□ -2.17
HMGB1P35-201ENST00000503360 CXCL3P19876 107 aa1.47□□□□□ -2.17
HMGB1P35-201ENST00000503360 MARCKSL1P49006 195 aa1.47□□□□□ -2.17
HMGB1P35-201ENST00000503360 CDK9P50750 372 aaKnown RBP1.47□□□□□ -2.17
HMGB1P35-201ENST00000503360 ZNF83P51522 516 aa1.47□□□□□ -2.17
HMGB1P35-201ENST00000503360 TMEM33P57088 247 aa1.47□□□□□ -2.17
HMGB1P35-201ENST00000503360 LINC00315P59091 139 aa1.47□□□□□ -2.17
HMGB1P35-201ENST00000503360 SNAP25P60880 206 aa1.47□□□□□ -2.17
HMGB1P35-201ENST00000503360 RAB2AP61019 212 aa1.47□□□□□ -2.17
HMGB1P35-201ENST00000503360 PSME3P61289 254 aa1.47□□□□□ -2.17
HMGB1P35-201ENST00000503360 FABP5Q01469 135 aa1.47□□□□□ -2.17
HMGB1P35-201ENST00000503360 ELOCQ15369 112 aa1.47□□□□□ -2.17
HMGB1P35-201ENST00000503360 UBE2SQ16763 222 aa1.47□□□□□ -2.17
HMGB1P35-201ENST00000503360 LIN52Q52LA3 116 aa1.47□□□□□ -2.17
HMGB1P35-201ENST00000503360 TRMT12Q53H54 448 aaKnown RBP1.47□□□□□ -2.17
HMGB1P35-201ENST00000503360 LINC00483Q53H64 154 aa1.47□□□□□ -2.17
HMGB1P35-201ENST00000503360 YIF1BQ5BJH7 314 aa1.47□□□□□ -2.17
HMGB1P35-201ENST00000503360 ACSBG2Q5FVE4 666 aa1.47□□□□□ -2.17
HMGB1P35-201ENST00000503360 FAM222AQ5U5X8 452 aa1.47□□□□□ -2.17
HMGB1P35-201ENST00000503360 TMEM215Q68D42 235 aa1.47□□□□□ -2.17
HMGB1P35-201ENST00000503360 ELP2Q6IA86 826 aa1.47□□□□□ -2.17
HMGB1P35-201ENST00000503360 LCN8Q6JVE9 175 aa1.47□□□□□ -2.17
HMGB1P35-201ENST00000503360 TMEM205Q6UW68 189 aa1.47□□□□□ -2.17
HMGB1P35-201ENST00000503360 CYHR1Q6ZMK1 362 aa1.47□□□□□ -2.17
HMGB1P35-201ENST00000503360 CLEC20AQ6ZU45 233 aa1.47□□□□□ -2.17
HMGB1P35-201ENST00000503360 FA2HQ7L5A8 372 aa1.47□□□□□ -2.17
HMGB1P35-201ENST00000503360 GLT6D1Q7Z4J2 308 aa1.47□□□□□ -2.17
HMGB1P35-201ENST00000503360 VN1R4Q7Z5H5 301 aa1.47□□□□□ -2.17
HMGB1P35-201ENST00000503360 CALHM3Q86XJ0 350 aa1.47□□□□□ -2.17
HMGB1P35-201ENST00000503360 PDPNQ86YL7 162 aa1.47□□□□□ -2.17
HMGB1P35-201ENST00000503360 ZBTB8OSQ8IWT0 167 aa1.47□□□□□ -2.17
HMGB1P35-201ENST00000503360 C1orf158Q8N1D5 194 aa1.47□□□□□ -2.17
HMGB1P35-201ENST00000503360 C15orf56Q8N910 161 aa1.47□□□□□ -2.17
HMGB1P35-201ENST00000503360 ZNF555Q8NEP9 628 aa1.47□□□□□ -2.17
HMGB1P35-201ENST00000503360 OR1L8Q8NGR8 309 aa1.47□□□□□ -2.17
HMGB1P35-201ENST00000503360 OR4X1Q8NH49 305 aa1.47□□□□□ -2.17
HMGB1P35-201ENST00000503360 OR2V1Q8NHB1 315 aa1.47□□□□□ -2.17
HMGB1P35-201ENST00000503360 MCFD2Q8NI22 146 aa1.47□□□□□ -2.17
HMGB1P35-201ENST00000503360 SPPL2BQ8TCT7 592 aa1.47□□□□□ -2.17
HMGB1P35-201ENST00000503360 PDXPQ96GD0 296 aa1.47□□□□□ -2.17
HMGB1P35-201ENST00000503360 OLFM3Q96PB7 478 aa1.47□□□□□ -2.17
HMGB1P35-201ENST00000503360 ZNF382Q96SR6 550 aa1.47□□□□□ -2.17
HMGB1P35-201ENST00000503360 NDFIP1Q9BT67 221 aa1.47□□□□□ -2.17
HMGB1P35-201ENST00000503360 CHCHD7Q9BUK0 85 aa1.47□□□□□ -2.17
HMGB1P35-201ENST00000503360 ULBP3Q9BZM4 244 aa1.47□□□□□ -2.17
HMGB1P35-201ENST00000503360 FGF23Q9GZV9 251 aaPredicted RBP1.47□□□□□ -2.17
HMGB1P35-201ENST00000503360 DCSTAMPQ9H295 470 aa1.47□□□□□ -2.17
HMGB1P35-201ENST00000503360 BOLA2Q9H3K6 86 aa1.47□□□□□ -2.17
HMGB1P35-201ENST00000503360 TAC3Q9UHF0 121 aa1.47□□□□□ -2.17
HMGB1P35-201ENST00000503360 LINC00527Q9UJ94 153 aa1.47□□□□□ -2.17
HMGB1P35-201ENST00000503360 HHLA2Q9UM44 414 aa1.47□□□□□ -2.17
HMGB1P35-201ENST00000503360 C14orf166Q9Y224 244 aaKnown RBP1.47□□□□□ -2.17
HMGB1P35-201ENST00000503360 HDGFL3Q9Y3E1 203 aa1.47□□□□□ -2.17
HMGB1P35-201ENST00000503360 TMEM131Q92545 1883 aa1.47□□□□□ -2.17
HMGB1P35-201ENST00000503360 PTPRKQ15262 1439 aa1.47□□□□□ -2.17
HMGB1P35-201ENST00000503360 SIGLEC1Q9BZZ2 1709 aa1.46□□□□□ -2.18
HMGB1P35-201ENST00000503360 IGKV2-28A0A075B6P5 120 aa1.46□□□□□ -2.18
HMGB1P35-201ENST00000503360 LOC102724200A0A096LPH7 203 aaPredicted RBP1.46□□□□□ -2.18
HMGB1P35-201ENST00000503360 IGHV3-49A0A0A0MS15 119 aa1.46□□□□□ -2.18
HMGB1P35-201ENST00000503360 LOC105371267A0A1B0GV96 52 aa1.46□□□□□ -2.18
HMGB1P35-201ENST00000503360 PQLC2LA1A4F0 135 aa1.46□□□□□ -2.18
HMGB1P35-201ENST00000503360 EEF1E1-BLOC1S5C9J1V9 151 aa1.46□□□□□ -2.18
HMGB1P35-201ENST00000503360 ZNF878C9JN71 531 aa1.46□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms