RNA–Protein interactions for RNA: ENST00000502802.1

HMGB1P3-201, Transcript of high mobility group box 1 pseudogene 3, humanhuman

BASIC

Gene HMGB1P3, Length 616 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P3-201ENST00000502802 A0A1B0GXF2 115 aa3.18□□□□□ -1.9
HMGB1P3-201ENST00000502802 LOC730098B7Z3J9 87 aa3.18□□□□□ -1.9
HMGB1P3-201ENST00000502802 PSMB9P28065 219 aa3.18□□□□□ -1.9
HMGB1P3-201ENST00000502802 TSPOP30536 169 aa3.18□□□□□ -1.9
HMGB1P3-201ENST00000502802 LGALS7P47929 136 aa3.18□□□□□ -1.9
HMGB1P3-201ENST00000502802 PLTPP55058 493 aa3.18□□□□□ -1.9
HMGB1P3-201ENST00000502802 ATP5G2Q06055 141 aa3.18□□□□□ -1.9
HMGB1P3-201ENST00000502802 BTN1A1Q13410 526 aa3.18□□□□□ -1.9
HMGB1P3-201ENST00000502802 EIF4EBP1Q13541 118 aaPredicted RBP3.18□□□□□ -1.9
HMGB1P3-201ENST00000502802 SSX1Q16384 188 aa3.18□□□□□ -1.9
HMGB1P3-201ENST00000502802 ZNF880Q6PDB4 577 aa3.18□□□□□ -1.9
HMGB1P3-201ENST00000502802 CD302Q8IX05 232 aa3.18□□□□□ -1.9
HMGB1P3-201ENST00000502802 SLC35G3Q8N808 338 aa3.18□□□□□ -1.9
HMGB1P3-201ENST00000502802 ACTL9Q8TC94 416 aa3.18□□□□□ -1.9
HMGB1P3-201ENST00000502802 FAM45AQ8TCE6 357 aa3.18□□□□□ -1.9
HMGB1P3-201ENST00000502802 RNASEH2CQ8TDP1 164 aaKnown RBP3.18□□□□□ -1.9
HMGB1P3-201ENST00000502802 RTN4IP1Q8WWV3 396 aaPredicted RBP3.18□□□□□ -1.9
HMGB1P3-201ENST00000502802 CCL17Q92583 94 aa3.18□□□□□ -1.9
HMGB1P3-201ENST00000502802 YIPF6Q96EC8 236 aa3.18□□□□□ -1.9
HMGB1P3-201ENST00000502802 DERL3Q96Q80 235 aa3.18□□□□□ -1.9
HMGB1P3-201ENST00000502802 SND1-IT1Q9HBX3 110 aa3.18□□□□□ -1.9
HMGB1P3-201ENST00000502802 SCML1Q9UN30 329 aa3.18□□□□□ -1.9
HMGB1P3-201ENST00000502802 SLC22A14Q9Y267 594 aa3.18□□□□□ -1.9
HMGB1P3-201ENST00000502802 EP300Q09472 2414 aaPredicted RBP3.18□□□□□ -1.9
HMGB1P3-201ENST00000502802 KIF26AQ9ULI4 1882 aaPredicted RBP3.18□□□□□ -1.9
HMGB1P3-201ENST00000502802 CABIN1Q9Y6J0 2220 aa3.17□□□□□ -1.9
HMGB1P3-201ENST00000502802 TCHHQ07283 1943 aa3.17□□□□□ -1.9
HMGB1P3-201ENST00000502802 PATJQ8NI35 1801 aa3.17□□□□□ -1.9
HMGB1P3-201ENST00000502802 DOCK9Q9BZ29 2069 aa3.17□□□□□ -1.9
HMGB1P3-201ENST00000502802 GVINP1Q7Z2Y8 2422 aa3.17□□□□□ -1.9
HMGB1P3-201ENST00000502802 IGKV2-28A0A075B6P5 120 aa3.17□□□□□ -1.9
HMGB1P3-201ENST00000502802 A0A1W2PRG6 482 aa3.17□□□□□ -1.9
HMGB1P3-201ENST00000502802 TMEM150BA6NC51 233 aa3.17□□□□□ -1.9
HMGB1P3-201ENST00000502802 BTNL10A8MVZ5 291 aa3.17□□□□□ -1.9
HMGB1P3-201ENST00000502802 C9JQL5 133 aa3.17□□□□□ -1.9
HMGB1P3-201ENST00000502802 GOLGA8RI6L899 631 aa3.17□□□□□ -1.9
HMGB1P3-201ENST00000502802 OR7C2O60412 319 aa3.17□□□□□ -1.9
HMGB1P3-201ENST00000502802 IGKV2D-28P01615 120 aa3.17□□□□□ -1.9
HMGB1P3-201ENST00000502802 CD28P10747 220 aa3.17□□□□□ -1.9
HMGB1P3-201ENST00000502802 M6PRP20645 277 aa3.17□□□□□ -1.9
HMGB1P3-201ENST00000502802 NTF3P20783 257 aa3.17□□□□□ -1.9
HMGB1P3-201ENST00000502802 MPIP34949 423 aa3.17□□□□□ -1.9
HMGB1P3-201ENST00000502802 MEF2CQ06413 473 aaPredicted RBP3.17□□□□□ -1.9
HMGB1P3-201ENST00000502802 COTL1Q14019 142 aa3.17□□□□□ -1.9
HMGB1P3-201ENST00000502802 ELOCQ15369 112 aa3.17□□□□□ -1.9
HMGB1P3-201ENST00000502802 LCE3EQ5T5B0 92 aa3.17□□□□□ -1.9
HMGB1P3-201ENST00000502802 LAMTOR1Q6IAA8 161 aa3.17□□□□□ -1.9
HMGB1P3-201ENST00000502802 TPGS1Q6ZTW0 290 aa3.17□□□□□ -1.9
HMGB1P3-201ENST00000502802 OR52N1Q8NH53 320 aa3.17□□□□□ -1.9
HMGB1P3-201ENST00000502802 OR5AK3PQ8NH89 298 aa3.17□□□□□ -1.9
HMGB1P3-201ENST00000502802 TNFRSF14Q92956 283 aa3.17□□□□□ -1.9
HMGB1P3-201ENST00000502802 MRAP2Q96G30 205 aa3.17□□□□□ -1.9
HMGB1P3-201ENST00000502802 ZNF514Q96K75 400 aaPredicted RBP3.17□□□□□ -1.9
HMGB1P3-201ENST00000502802 MBOAT7Q96N66 472 aa3.17□□□□□ -1.9
HMGB1P3-201ENST00000502802 APOL4Q9BPW4 351 aa3.17□□□□□ -1.9
HMGB1P3-201ENST00000502802 SUCNR1Q9BXA5 334 aa3.17□□□□□ -1.9
HMGB1P3-201ENST00000502802 MS4A8Q9BY19 250 aa3.17□□□□□ -1.9
HMGB1P3-201ENST00000502802 UPF3BQ9BZI7 483 aaKnown RBP3.17□□□□□ -1.9
HMGB1P3-201ENST00000502802 MFSD1Q9H3U5 465 aa3.17□□□□□ -1.9
HMGB1P3-201ENST00000502802 ASCL3Q9NQ33 180 aa3.17□□□□□ -1.9
HMGB1P3-201ENST00000502802 C1orf109Q9NX04 203 aa3.17□□□□□ -1.9
HMGB1P3-201ENST00000502802 TAS2R13Q9NYV9 303 aa3.17□□□□□ -1.9
HMGB1P3-201ENST00000502802 SPAG17Q6Q759 2223 aa3.17□□□□□ -1.9
HMGB1P3-201ENST00000502802 TICRRQ7Z2Z1 1910 aa3.17□□□□□ -1.9
HMGB1P3-201ENST00000502802 DNAH14Q0VDD8 3507 aa3.16□□□□□ -1.9
HMGB1P3-201ENST00000502802 PGPA6NDG6 321 aa3.16□□□□□ -1.9
HMGB1P3-201ENST00000502802 FFAR1O14842 300 aa3.16□□□□□ -1.9
HMGB1P3-201ENST00000502802 SLC37A4O43826 429 aa3.16□□□□□ -1.9
HMGB1P3-201ENST00000502802 CBR3O75828 277 aa3.16□□□□□ -1.9
HMGB1P3-201ENST00000502802 OCMP0CE72 109 aaPredicted RBP3.16□□□□□ -1.9
HMGB1P3-201ENST00000502802 LIMS3P0CW19 117 aa3.16□□□□□ -1.9
HMGB1P3-201ENST00000502802 LIMS4P0CW20 117 aa3.16□□□□□ -1.9
HMGB1P3-201ENST00000502802 ZNF35P13682 527 aa3.16□□□□□ -1.9
HMGB1P3-201ENST00000502802 HBG1P69891 147 aa3.16□□□□□ -1.9
HMGB1P3-201ENST00000502802 HBG2P69892 147 aa3.16□□□□□ -1.9
HMGB1P3-201ENST00000502802 PRDX1Q06830 199 aaKnown RBP3.16□□□□□ -1.9
HMGB1P3-201ENST00000502802 ZNF616Q08AN1 781 aa3.16□□□□□ -1.9
HMGB1P3-201ENST00000502802 UBE2NLQ5JXB2 153 aa3.16□□□□□ -1.9
HMGB1P3-201ENST00000502802 PRSS54Q6PEW0 395 aa3.16□□□□□ -1.9
HMGB1P3-201ENST00000502802 FAM183BPQ6ZVS7 135 aa3.16□□□□□ -1.9
HMGB1P3-201ENST00000502802 TRMT10CQ7L0Y3 403 aaKnown RBP3.16□□□□□ -1.9
HMGB1P3-201ENST00000502802 GALNT10Q86SR1 603 aa3.16□□□□□ -1.9
HMGB1P3-201ENST00000502802 LINC00596Q86U02 117 aa3.16□□□□□ -1.9
HMGB1P3-201ENST00000502802 BLIDQ8IZY5 108 aa3.16□□□□□ -1.9
HMGB1P3-201ENST00000502802 STK40Q8N2I9 435 aa3.16□□□□□ -1.9
HMGB1P3-201ENST00000502802 TMEM105Q8N8V8 129 aa3.16□□□□□ -1.9
HMGB1P3-201ENST00000502802 ZDHHC22Q8N966 263 aa3.16□□□□□ -1.9
HMGB1P3-201ENST00000502802 ZNF555Q8NEP9 628 aa3.16□□□□□ -1.9
HMGB1P3-201ENST00000502802 OR5H2Q8NGV7 314 aa3.16□□□□□ -1.9
HMGB1P3-201ENST00000502802 PGLYRP3Q96LB9 341 aa3.16□□□□□ -1.9
HMGB1P3-201ENST00000502802 IP6K3Q96PC2 410 aa3.16□□□□□ -1.9
HMGB1P3-201ENST00000502802 HDHD2Q9H0R4 259 aa3.16□□□□□ -1.9
HMGB1P3-201ENST00000502802 POMKQ9H5K3 350 aa3.16□□□□□ -1.9
HMGB1P3-201ENST00000502802 RBM12B-AS1Q9P1G2 102 aa3.16□□□□□ -1.9
HMGB1P3-201ENST00000502802 PUS1Q9Y606 427 aaKnown RBP eCLIP3.16□□□□□ -1.9
HMGB1P3-201ENST00000502802 CEP250Q9BV73 2442 aa3.16□□□□□ -1.9
HMGB1P3-201ENST00000502802 OTOGLQ3ZCN5 2332 aa3.16□□□□□ -1.9
HMGB1P3-201ENST00000502802 F5P12259 2224 aa3.16□□□□□ -1.9
HMGB1P3-201ENST00000502802 SCN1AP35498 2009 aa3.15□□□□□ -1.9
HMGB1P3-201ENST00000502802 PCM1Q15154 2024 aa3.15□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms