RNA–Protein interactions for RNA: ENST00000493829.5

USP39-218, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2

Gene USP39, Length 1,660 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-218ENST00000493829 OVCH2Q7RTZ1 564 aa15.89■□□□□ 0.13
USP39-218ENST00000493829 C11orf42Q8N5U0 333 aa15.89■□□□□ 0.13
USP39-218ENST00000493829 Q8N7P7 452 aa15.89■□□□□ 0.13
USP39-218ENST00000493829 C1orf159Q96HA4 380 aa15.89■□□□□ 0.13
USP39-218ENST00000493829 SLC6A7Q99884 636 aa15.89■□□□□ 0.13
USP39-218ENST00000493829 RAB9BQ9NP90 201 aa15.89■□□□□ 0.13
USP39-218ENST00000493829 POLR3KQ9Y2Y1 108 aaPredicted RBP15.89■□□□□ 0.13
USP39-218ENST00000493829 INSIG2Q9Y5U4 225 aa15.89■□□□□ 0.13
USP39-218ENST00000493829 TRBV6-7A0A0A0MS04 114 aa15.88■□□□□ 0.13
USP39-218ENST00000493829 A0A1W2PPE3 182 aa15.88■□□□□ 0.13
USP39-218ENST00000493829 TGFAP01135 160 aa15.88■□□□□ 0.13
USP39-218ENST00000493829 TBPP20226 339 aa15.88■□□□□ 0.13
USP39-218ENST00000493829 ZBTB25P24278 435 aa15.88■□□□□ 0.13
USP39-218ENST00000493829 COX7A1P24310 79 aa15.88■□□□□ 0.13
USP39-218ENST00000493829 FCGR2CP31995 323 aa15.88■□□□□ 0.13
USP39-218ENST00000493829 FAUP35544 74 aaKnown RBP15.88■□□□□ 0.13
USP39-218ENST00000493829 CEACAM6P40199 344 aa15.88■□□□□ 0.13
USP39-218ENST00000493829 LOXL3P58215 753 aa15.88■□□□□ 0.13
USP39-218ENST00000493829 DYRK1AQ13627 763 aa15.88■□□□□ 0.13
USP39-218ENST00000493829 MEF2DQ14814 521 aa15.88■□□□□ 0.13
USP39-218ENST00000493829 VMO1Q7Z5L0 202 aa15.88■□□□□ 0.13
USP39-218ENST00000493829 PDZD9Q8IXQ8 264 aa15.88■□□□□ 0.13
USP39-218ENST00000493829 TMEM186Q96B77 213 aa15.88■□□□□ 0.13
USP39-218ENST00000493829 C11orf54Q9H0W9 315 aaPredicted RBP15.88■□□□□ 0.13
USP39-218ENST00000493829 MYO9AB2RTY4 2548 aa15.87■□□□□ 0.13
USP39-218ENST00000493829 M0R1W7 72 aa15.87■□□□□ 0.13
USP39-218ENST00000493829 LYRM1O43325 122 aa15.87■□□□□ 0.13
USP39-218ENST00000493829 FXYD4P59646 89 aa15.87■□□□□ 0.13
USP39-218ENST00000493829 KLRD1Q13241 179 aa15.87■□□□□ 0.13
USP39-218ENST00000493829 VAX1Q5SQQ9 334 aa15.87■□□□□ 0.13
USP39-218ENST00000493829 GLCCI1Q86VQ1 547 aa15.87■□□□□ 0.13
USP39-218ENST00000493829 KIR3DL3Q8N743 410 aa15.87■□□□□ 0.13
USP39-218ENST00000493829 OR51S1Q8NGJ8 323 aa15.87■□□□□ 0.13
USP39-218ENST00000493829 ZNF2Q9BSG1 426 aaPredicted RBP15.87■□□□□ 0.13
USP39-218ENST00000493829 LINC00574Q9H8X3 128 aa15.87■□□□□ 0.13
USP39-218ENST00000493829 GFOD1Q9NXC2 390 aa15.87■□□□□ 0.13
USP39-218ENST00000493829 RDH8Q9NYR8 311 aa15.87■□□□□ 0.13
USP39-218ENST00000493829 JPT1Q9UK76 154 aa15.87■□□□□ 0.13
USP39-218ENST00000493829 SESN1Q9Y6P5 492 aa15.87■□□□□ 0.13
USP39-218ENST00000493829 OTOGQ6ZRI0 2925 aa15.87■□□□□ 0.13
USP39-218ENST00000493829 FLNAP21333 2647 aaKnown RBP15.87■□□□□ 0.13
USP39-218ENST00000493829 TRAV20A0A0B4J274 112 aa15.86■□□□□ 0.13
USP39-218ENST00000493829 hCG_1809904A0A1W2PP81 198 aa15.86■□□□□ 0.13
USP39-218ENST00000493829 A0A1W2PPE2 198 aa15.86■□□□□ 0.13
USP39-218ENST00000493829 A0A1W2PR64 198 aa15.86■□□□□ 0.13
USP39-218ENST00000493829 A0A1W2PRV1 198 aa15.86■□□□□ 0.13
USP39-218ENST00000493829 DISC1C4P0D8 188 aa15.86■□□□□ 0.13
USP39-218ENST00000493829 TOX4O94842 621 aa15.86■□□□□ 0.13
USP39-218ENST00000493829 CTXN2P0C2S0 81 aa15.86■□□□□ 0.13
USP39-218ENST00000493829 AADACP22760 399 aa15.86■□□□□ 0.13
USP39-218ENST00000493829 GZMKP49863 264 aa15.86■□□□□ 0.13
USP39-218ENST00000493829 HTD2P86397 168 aa15.86■□□□□ 0.13
USP39-218ENST00000493829 FAHD2BQ6P2I3 314 aaPredicted RBP15.86■□□□□ 0.13
USP39-218ENST00000493829 POC5Q8NA72 575 aa15.86■□□□□ 0.13
USP39-218ENST00000493829 FAHD2AQ96GK7 314 aa15.86■□□□□ 0.13
USP39-218ENST00000493829 SIRPDQ9H106 197 aa15.86■□□□□ 0.13
USP39-218ENST00000493829 ZNRD1Q9P1U0 126 aa15.86■□□□□ 0.13
USP39-218ENST00000493829 CENPXA8MT69 81 aa15.86■□□□□ 0.13
USP39-218ENST00000493829 ZNF735P0CB33 412 aa15.86■□□□□ 0.13
USP39-218ENST00000493829 CCR6P51684 374 aa15.86■□□□□ 0.13
USP39-218ENST00000493829 ASAH1Q13510 395 aa15.86■□□□□ 0.13
USP39-218ENST00000493829 TMEM17Q86X19 198 aa15.86■□□□□ 0.13
USP39-218ENST00000493829 H1FOOQ8IZA3 346 aaPredicted RBP15.86■□□□□ 0.13
USP39-218ENST00000493829 CREB3L1Q96BA8 519 aa15.86■□□□□ 0.13
USP39-218ENST00000493829 TMEM133Q9H2Q1 129 aa15.86■□□□□ 0.13
USP39-218ENST00000493829 METTL8Q9H825 291 aaKnown RBP15.86■□□□□ 0.13
USP39-218ENST00000493829 KPTNQ9Y664 436 aa15.86■□□□□ 0.13
USP39-218ENST00000493829 CREBBPQ92793 2442 aa15.85■□□□□ 0.13
USP39-218ENST00000493829 SLC31A2O15432 143 aa15.85■□□□□ 0.13
USP39-218ENST00000493829 DEFA1P59665 94 aa15.85■□□□□ 0.13
USP39-218ENST00000493829 DEFA3P59666 94 aa15.85■□□□□ 0.13
USP39-218ENST00000493829 PALMDQ9NP74 551 aa15.85■□□□□ 0.13
USP39-218ENST00000493829 ZANQ9Y493 2812 aa15.84■□□□□ 0.13
USP39-218ENST00000493829 A0A1W2PRD5 423 aa15.84■□□□□ 0.13
USP39-218ENST00000493829 A0A1W2PRF3 423 aa15.84■□□□□ 0.13
USP39-218ENST00000493829 A0A1W2PRM7 423 aa15.84■□□□□ 0.13
USP39-218ENST00000493829 ST8SIA5O15466 376 aa15.84■□□□□ 0.13
USP39-218ENST00000493829 RBP4P02753 201 aa15.84■□□□□ 0.13
USP39-218ENST00000493829 BTCP35070 178 aa15.84■□□□□ 0.13
USP39-218ENST00000493829 HERV-K104P61576 105 aa15.84■□□□□ 0.13
USP39-218ENST00000493829 MORN2Q502X0 79 aa15.84■□□□□ 0.13
USP39-218ENST00000493829 CYB5R2Q6BCY4 276 aa15.84■□□□□ 0.13
USP39-218ENST00000493829 IDO2Q6ZQW0 420 aa15.84■□□□□ 0.13
USP39-218ENST00000493829 PNKDQ8N490 385 aa15.84■□□□□ 0.13
USP39-218ENST00000493829 ARRDC1Q8N5I2 433 aa15.84■□□□□ 0.13
USP39-218ENST00000493829 OR6F1Q8NGZ6 308 aa15.84■□□□□ 0.13
USP39-218ENST00000493829 TOMM40LQ969M1 308 aa15.84■□□□□ 0.13
USP39-218ENST00000493829 TBX15Q96SF7 602 aa15.84■□□□□ 0.13
USP39-218ENST00000493829 FXYD6Q9H0Q3 95 aa15.84■□□□□ 0.13
USP39-218ENST00000493829 C7orf69Q9H7B7 122 aa15.84■□□□□ 0.13
USP39-218ENST00000493829 DIRAS3O95661 229 aa15.83■□□□□ 0.13
USP39-218ENST00000493829 PPYP01298 95 aa15.83■□□□□ 0.13
USP39-218ENST00000493829 MMP9P14780 707 aa15.83■□□□□ 0.13
USP39-218ENST00000493829 PAX8Q06710 450 aa15.83■□□□□ 0.13
USP39-218ENST00000493829 ZNF660Q6AZW8 331 aaPredicted RBP15.83■□□□□ 0.13
USP39-218ENST00000493829 OR2AK2Q8NG84 335 aa15.83■□□□□ 0.13
USP39-218ENST00000493829 OR10A7Q8NGE5 316 aa15.83■□□□□ 0.13
USP39-218ENST00000493829 OR52M1Q8NGK5 317 aa15.83■□□□□ 0.13
USP39-218ENST00000493829 KCNS2Q9ULS6 477 aa15.83■□□□□ 0.13
USP39-218ENST00000493829 PSG11Q9UQ72 335 aa15.83■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 138.8 ms