RNA–Protein interactions for RNA: ENST00000492954.1

PTPRU-207, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 2

Gene PTPRU, Length 625 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-207ENST00000492954 EAF1Q96JC9 268 aaPredicted RBP14.28□□□□□ -0.12
PTPRU-207ENST00000492954 NOL4LQ96MY1 436 aaPredicted RBP14.28□□□□□ -0.12
PTPRU-207ENST00000492954 MBNL3Q9NUK0 354 aaKnown RBP14.28□□□□□ -0.12
PTPRU-207ENST00000492954 RGS10O43665 173 aa14.27□□□□□ -0.13
PTPRU-207ENST00000492954 PRB2P02812 416 aaPredicted RBP14.27□□□□□ -0.13
PTPRU-207ENST00000492954 PF4V1P10720 104 aa14.27□□□□□ -0.13
PTPRU-207ENST00000492954 RPS25P62851 125 aaKnown RBP14.27□□□□□ -0.13
PTPRU-207ENST00000492954 RPS27AP62979 156 aaKnown RBP14.27□□□□□ -0.13
PTPRU-207ENST00000492954 UNC119Q13432 240 aa14.27□□□□□ -0.13
PTPRU-207ENST00000492954 GNMTQ14749 295 aa14.27□□□□□ -0.13
PTPRU-207ENST00000492954 RBMXL1Q96E39 390 aaKnown RBP14.27□□□□□ -0.13
PTPRU-207ENST00000492954 NEDD4LQ96PU5 975 aa14.27□□□□□ -0.13
PTPRU-207ENST00000492954 SULT4A1Q9BR01 284 aa14.27□□□□□ -0.13
PTPRU-207ENST00000492954 TMEM59Q9BXS4 323 aa14.27□□□□□ -0.13
PTPRU-207ENST00000492954 PSMB11A5LHX3 300 aa14.26□□□□□ -0.13
PTPRU-207ENST00000492954 NCBP2LA6PVI3 153 aaKnown RBP14.26□□□□□ -0.13
PTPRU-207ENST00000492954 ZNF736B4DX44 427 aaPredicted RBP14.26□□□□□ -0.13
PTPRU-207ENST00000492954 SLC22A1O15245 554 aa14.26□□□□□ -0.13
PTPRU-207ENST00000492954 CRHBPP24387 322 aa14.26□□□□□ -0.13
PTPRU-207ENST00000492954 HTR2CP28335 458 aa14.26□□□□□ -0.13
PTPRU-207ENST00000492954 ZNF137PP52743 207 aa14.26□□□□□ -0.13
PTPRU-207ENST00000492954 TPBGQ13641 420 aa14.26□□□□□ -0.13
PTPRU-207ENST00000492954 IZUMO2Q6UXV1 221 aa14.26□□□□□ -0.13
PTPRU-207ENST00000492954 TMEM91Q6ZNR0 172 aa14.26□□□□□ -0.13
PTPRU-207ENST00000492954 C6orf201Q7Z4U5 140 aa14.26□□□□□ -0.13
PTPRU-207ENST00000492954 Q8N6K4 173 aa14.26□□□□□ -0.13
PTPRU-207ENST00000492954 OR52L2PQ8NGH6 319 aa14.26□□□□□ -0.13
PTPRU-207ENST00000492954 OR2T10Q8NGZ9 312 aa14.26□□□□□ -0.13
PTPRU-207ENST00000492954 NICN1Q9BSH3 213 aa14.26□□□□□ -0.13
PTPRU-207ENST00000492954 FAAP24Q9BTP7 215 aa14.26□□□□□ -0.13
PTPRU-207ENST00000492954 CCDC90BQ9GZT6 254 aa14.26□□□□□ -0.13
PTPRU-207ENST00000492954 OR2S2Q9NQN1 319 aa14.26□□□□□ -0.13
PTPRU-207ENST00000492954 KCNIP1Q9NZI2 227 aa14.26□□□□□ -0.13
PTPRU-207ENST00000492954 LINC00527Q9UJ94 153 aa14.26□□□□□ -0.13
PTPRU-207ENST00000492954 ERICH4A6NGS2 130 aa14.25□□□□□ -0.13
PTPRU-207ENST00000492954 SERPINE3A8MV23 424 aa14.25□□□□□ -0.13
PTPRU-207ENST00000492954 CD37P11049 281 aa14.25□□□□□ -0.13
PTPRU-207ENST00000492954 CD1BP29016 333 aa14.25□□□□□ -0.13
PTPRU-207ENST00000492954 MAP2K4P45985 399 aa14.25□□□□□ -0.13
PTPRU-207ENST00000492954 QRFPP83859 136 aa14.25□□□□□ -0.13
PTPRU-207ENST00000492954 TGIF2LXQ8IUE1 241 aa14.25□□□□□ -0.13
PTPRU-207ENST00000492954 KCNG3Q8TAE7 436 aa14.25□□□□□ -0.13
PTPRU-207ENST00000492954 GFI1Q99684 422 aa14.25□□□□□ -0.13
PTPRU-207ENST00000492954 TM2D1Q9BX74 207 aa14.25□□□□□ -0.13
PTPRU-207ENST00000492954 VCX3BQ9H321 246 aa14.25□□□□□ -0.13
PTPRU-207ENST00000492954 A0A0A6YYD4 124 aa14.24□□□□□ -0.13
PTPRU-207ENST00000492954 TMEM14DPA8MWL7 114 aa14.24□□□□□ -0.13
PTPRU-207ENST00000492954 TXNL1O43396 289 aa14.24□□□□□ -0.13
PTPRU-207ENST00000492954 IGHG2P01859 326 aa14.24□□□□□ -0.13
PTPRU-207ENST00000492954 PF4P02776 101 aa14.24□□□□□ -0.13
PTPRU-207ENST00000492954 CPEP16870 476 aa14.24□□□□□ -0.13
PTPRU-207ENST00000492954 CD33P20138 364 aa14.24□□□□□ -0.13
PTPRU-207ENST00000492954 PPP1CCP36873 323 aaKnown RBP14.24□□□□□ -0.13
PTPRU-207ENST00000492954 MLLT11Q13015 90 aaPredicted RBP14.24□□□□□ -0.13
PTPRU-207ENST00000492954 P2RY14Q15391 338 aa14.24□□□□□ -0.13
PTPRU-207ENST00000492954 MORN2Q502X0 79 aa14.24□□□□□ -0.13
PTPRU-207ENST00000492954 PRSS48Q7RTY5 328 aa14.24□□□□□ -0.13
PTPRU-207ENST00000492954 SLC35E3Q7Z769 313 aa14.24□□□□□ -0.13
PTPRU-207ENST00000492954 ZNF554Q86TJ5 538 aa14.24□□□□□ -0.13
PTPRU-207ENST00000492954 Q8N9W7 124 aa14.24□□□□□ -0.13
PTPRU-207ENST00000492954 OR6M1Q8NGM8 313 aa14.24□□□□□ -0.13
PTPRU-207ENST00000492954 CHPT1Q8WUD6 406 aa14.24□□□□□ -0.13
PTPRU-207ENST00000492954 ISYNA1Q9NPH2 558 aa14.24□□□□□ -0.13
PTPRU-207ENST00000492954 JPT1Q9UK76 154 aa14.24□□□□□ -0.13
PTPRU-207ENST00000492954 LINC01548A6NM66 108 aa14.23□□□□□ -0.13
PTPRU-207ENST00000492954 BPNT1O95861 308 aa14.23□□□□□ -0.13
PTPRU-207ENST00000492954 MOSP00540 346 aa14.23□□□□□ -0.13
PTPRU-207ENST00000492954 BLVRBP30043 206 aaPredicted RBP14.23□□□□□ -0.13
PTPRU-207ENST00000492954 STEAP3Q658P3 488 aa14.23□□□□□ -0.13
PTPRU-207ENST00000492954 WFDC9Q8NEX5 89 aa14.23□□□□□ -0.13
PTPRU-207ENST00000492954 PHF21AQ96BD5 680 aa14.23□□□□□ -0.13
PTPRU-207ENST00000492954 CNBD2Q96M20 576 aa14.23□□□□□ -0.13
PTPRU-207ENST00000492954 MGLLQ99685 303 aa14.23□□□□□ -0.13
PTPRU-207ENST00000492954 ABHD14AQ9BUJ0 271 aa14.23□□□□□ -0.13
PTPRU-207ENST00000492954 PLGRKTQ9HBL7 147 aa14.23□□□□□ -0.13
PTPRU-207ENST00000492954 PLSCR3Q9NRY6 295 aa14.23□□□□□ -0.13
PTPRU-207ENST00000492954 AK6Q9Y3D8 172 aaKnown RBP14.23□□□□□ -0.13
PTPRU-207ENST00000492954 LANCL1O43813 399 aa14.22□□□□□ -0.13
PTPRU-207ENST00000492954 IGLL1P15814 213 aa14.22□□□□□ -0.13
PTPRU-207ENST00000492954 GPR12P47775 334 aa14.22□□□□□ -0.13
PTPRU-207ENST00000492954 HSPA13P48723 471 aa14.22□□□□□ -0.13
PTPRU-207ENST00000492954 HTD2P86397 168 aa14.22□□□□□ -0.13
PTPRU-207ENST00000492954 FABP5Q01469 135 aa14.22□□□□□ -0.13
PTPRU-207ENST00000492954 TRAM1Q15629 374 aa14.22□□□□□ -0.13
PTPRU-207ENST00000492954 HMGN3Q15651 99 aa14.22□□□□□ -0.13
PTPRU-207ENST00000492954 Q6ZPA2 131 aa14.22□□□□□ -0.13
PTPRU-207ENST00000492954 FOXRED2Q8IWF2 684 aa14.22□□□□□ -0.13
PTPRU-207ENST00000492954 STPG2Q8N412 459 aa14.22□□□□□ -0.13
PTPRU-207ENST00000492954 S1PR3Q99500 378 aa14.22□□□□□ -0.13
PTPRU-207ENST00000492954 LPAR5Q9H1C0 372 aa14.22□□□□□ -0.13
PTPRU-207ENST00000492954 ABCG5Q9H222 651 aa14.22□□□□□ -0.13
PTPRU-207ENST00000492954 LIN7CQ9NUP9 197 aaKnown RBP14.22□□□□□ -0.13
PTPRU-207ENST00000492954 SLC17A2O00624 439 aa14.21□□□□□ -0.13
PTPRU-207ENST00000492954 SOCS1O15524 211 aa14.21□□□□□ -0.13
PTPRU-207ENST00000492954 ARL6IP5O75915 188 aa14.21□□□□□ -0.13
PTPRU-207ENST00000492954 PSMA1P25786 263 aaKnown RBP14.21□□□□□ -0.13
PTPRU-207ENST00000492954 CALRP27797 417 aaKnown RBP14.21□□□□□ -0.13
PTPRU-207ENST00000492954 F2RL1P55085 397 aa14.21□□□□□ -0.13
PTPRU-207ENST00000492954 RPL23AP62750 156 aaKnown RBP14.21□□□□□ -0.13
PTPRU-207ENST00000492954 LSAMPQ13449 338 aa14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms