RNA–Protein interactions for RNA: ENST00000492386.5

SEMA4D-220, Transcript of semaphorin 4D, humanhuman

TSL 2

Gene SEMA4D, Length 2,396 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-220ENST00000492386 WDFY4Q6ZS81 3184 aa13.66□□□□□ -0.22
SEMA4D-220ENST00000492386 A0A1W2PR80 420 aa13.66□□□□□ -0.22
SEMA4D-220ENST00000492386 C21orf140B9A014 251 aa13.66□□□□□ -0.22
SEMA4D-220ENST00000492386 CNOT4O95628 575 aaKnown RBP13.66□□□□□ -0.22
SEMA4D-220ENST00000492386 IFNA5P01569 189 aa13.66□□□□□ -0.22
SEMA4D-220ENST00000492386 S100A9P06702 114 aaKnown RBP13.66□□□□□ -0.22
SEMA4D-220ENST00000492386 ZNF806P0C7X5 589 aa13.66□□□□□ -0.22
SEMA4D-220ENST00000492386 ZNF883P0CG24 379 aa13.66□□□□□ -0.22
SEMA4D-220ENST00000492386 MEOX1P50221 254 aa13.66□□□□□ -0.22
SEMA4D-220ENST00000492386 DLK1P80370 383 aa13.66□□□□□ -0.22
SEMA4D-220ENST00000492386 FAM186AA6NE01 2351 aa13.66□□□□□ -0.22
SEMA4D-220ENST00000492386 LOC102723971A0A1B0GUV8 181 aa13.66□□□□□ -0.22
SEMA4D-220ENST00000492386 LRP5LA4QPB2 252 aa13.66□□□□□ -0.22
SEMA4D-220ENST00000492386 IFNA17P01571 189 aa13.66□□□□□ -0.22
SEMA4D-220ENST00000492386 MDH2P40926 338 aaKnown RBP13.66□□□□□ -0.22
SEMA4D-220ENST00000492386 KHDC3LQ587J8 217 aa13.66□□□□□ -0.22
SEMA4D-220ENST00000492386 ZNF497Q6ZNH5 498 aa13.66□□□□□ -0.22
SEMA4D-220ENST00000492386 P4HA3Q7Z4N8 544 aa13.66□□□□□ -0.22
SEMA4D-220ENST00000492386 RNASE11Q8TAA1 199 aaKnown RBP13.66□□□□□ -0.22
SEMA4D-220ENST00000492386 ZNF251Q9BRH9 671 aa13.66□□□□□ -0.22
SEMA4D-220ENST00000492386 TREM2Q9NZC2 230 aa13.66□□□□□ -0.22
SEMA4D-220ENST00000492386 PPP1R3CQ9UQK1 317 aa13.66□□□□□ -0.22
SEMA4D-220ENST00000492386 SIRPB1O00241 398 aa13.65□□□□□ -0.22
SEMA4D-220ENST00000492386 SYNGR2O43760 224 aa13.65□□□□□ -0.22
SEMA4D-220ENST00000492386 SP1P08047 785 aa13.65□□□□□ -0.22
SEMA4D-220ENST00000492386 RAB2AP61019 212 aa13.65□□□□□ -0.22
SEMA4D-220ENST00000492386 ARL16Q0P5N6 197 aa13.65□□□□□ -0.22
SEMA4D-220ENST00000492386 ZNF585BQ52M93 769 aa13.65□□□□□ -0.22
SEMA4D-220ENST00000492386 MOB1BQ7L9L4 216 aa13.65□□□□□ -0.22
SEMA4D-220ENST00000492386 HAPLN4Q86UW8 402 aa13.65□□□□□ -0.22
SEMA4D-220ENST00000492386 TVP23CQ96ET8 276 aa13.65□□□□□ -0.22
SEMA4D-220ENST00000492386 TCEAL7Q9BRU2 100 aa13.65□□□□□ -0.22
SEMA4D-220ENST00000492386 RSG1Q9BU20 258 aa13.65□□□□□ -0.22
SEMA4D-220ENST00000492386 MMP24Q9Y5R2 645 aa13.65□□□□□ -0.22
SEMA4D-220ENST00000492386 CLN5O75503 358 aa13.65□□□□□ -0.22
SEMA4D-220ENST00000492386 OR2H2O95918 312 aa13.65□□□□□ -0.22
SEMA4D-220ENST00000492386 ERVK11-1P61568 191 aa13.65□□□□□ -0.22
SEMA4D-220ENST00000492386 FBXW9Q5XUX1 488 aa13.65□□□□□ -0.22
SEMA4D-220ENST00000492386 PRR18Q8N4B5 295 aa13.65□□□□□ -0.22
SEMA4D-220ENST00000492386 SCCPDHQ8NBX0 429 aa13.65□□□□□ -0.22
SEMA4D-220ENST00000492386 MDS2Q8NDY4 140 aa13.65□□□□□ -0.22
SEMA4D-220ENST00000492386 OR10G4Q8NGN3 311 aa13.65□□□□□ -0.22
SEMA4D-220ENST00000492386 RPRMQ9NS64 109 aa13.65□□□□□ -0.22
SEMA4D-220ENST00000492386 COL6A3P12111 3177 aa13.64□□□□□ -0.23
SEMA4D-220ENST00000492386 ATXN7O15265 892 aaPredicted RBP13.64□□□□□ -0.23
SEMA4D-220ENST00000492386 PPIHO43447 177 aaKnown RBP13.64□□□□□ -0.23
SEMA4D-220ENST00000492386 IAPPP10997 89 aa13.64□□□□□ -0.23
SEMA4D-220ENST00000492386 ELOBQ15370 118 aa13.64□□□□□ -0.23
SEMA4D-220ENST00000492386 SLC25A24Q6NUK1 477 aa13.64□□□□□ -0.23
SEMA4D-220ENST00000492386 ZNF343Q6P1L6 599 aa13.64□□□□□ -0.23
SEMA4D-220ENST00000492386 VASH2Q86V25 355 aa13.64□□□□□ -0.23
SEMA4D-220ENST00000492386 MYPOPQ86VE0 399 aaPredicted RBP13.64□□□□□ -0.23
SEMA4D-220ENST00000492386 ZNF525Q8N782 197 aa13.64□□□□□ -0.23
SEMA4D-220ENST00000492386 UBALD1Q8TB05 177 aa13.64□□□□□ -0.23
SEMA4D-220ENST00000492386 Q8WTZ3 238 aa13.64□□□□□ -0.23
SEMA4D-220ENST00000492386 NIPSNAP3BQ9BS92 247 aa13.64□□□□□ -0.23
SEMA4D-220ENST00000492386 RTL8AQ9BWD3 113 aa13.64□□□□□ -0.23
SEMA4D-220ENST00000492386 VSIRQ9H7M9 311 aa13.64□□□□□ -0.23
SEMA4D-220ENST00000492386 MUC3AQ02505 3323 aa13.64□□□□□ -0.23
SEMA4D-220ENST00000492386 METTL15P1P0C7V9 234 aa13.64□□□□□ -0.23
SEMA4D-220ENST00000492386 RPS10P46783 165 aaKnown RBP13.64□□□□□ -0.23
SEMA4D-220ENST00000492386 SLC35E3Q7Z769 313 aa13.64□□□□□ -0.23
SEMA4D-220ENST00000492386 GUCD1Q96NT3 240 aa13.64□□□□□ -0.23
SEMA4D-220ENST00000492386 PSENENQ9NZ42 101 aa13.64□□□□□ -0.23
SEMA4D-220ENST00000492386 IL17BQ9UHF5 180 aa13.64□□□□□ -0.23
SEMA4D-220ENST00000492386 CXCL1P09341 107 aa13.63□□□□□ -0.23
SEMA4D-220ENST00000492386 MPLP40238 635 aa13.63□□□□□ -0.23
SEMA4D-220ENST00000492386 EIF2S3P41091 472 aaKnown RBP13.63□□□□□ -0.23
SEMA4D-220ENST00000492386 ZNF726P1Q15940 193 aa13.63□□□□□ -0.23
SEMA4D-220ENST00000492386 TCTEX1D2Q8WW35 142 aa13.63□□□□□ -0.23
SEMA4D-220ENST00000492386 NANOS1Q8WY41 292 aaKnown RBP13.63□□□□□ -0.23
SEMA4D-220ENST00000492386 ARRDC1-AS1Q9H2J1 176 aa13.63□□□□□ -0.23
SEMA4D-220ENST00000492386 NIT2Q9NQR4 276 aa13.63□□□□□ -0.23
SEMA4D-220ENST00000492386 GSN-AS1Q9NRJ2 163 aa13.63□□□□□ -0.23
SEMA4D-220ENST00000492386 GNG13Q9P2W3 67 aa13.63□□□□□ -0.23
SEMA4D-220ENST00000492386 TRAPPC2LQ9UL33 140 aa13.63□□□□□ -0.23
SEMA4D-220ENST00000492386 KLF13Q9Y2Y9 288 aaPredicted RBP13.63□□□□□ -0.23
SEMA4D-220ENST00000492386 CELSR3Q9NYQ7 3312 aa13.63□□□□□ -0.23
SEMA4D-220ENST00000492386 TECTAO75443 2155 aa13.63□□□□□ -0.23
SEMA4D-220ENST00000492386 CELA3BP08861 270 aa13.63□□□□□ -0.23
SEMA4D-220ENST00000492386 ERVFRD-1P60508 538 aa13.63□□□□□ -0.23
SEMA4D-220ENST00000492386 SLC10A1Q14973 349 aa13.63□□□□□ -0.23
SEMA4D-220ENST00000492386 SCGB1C1Q8TD33 95 aa13.63□□□□□ -0.23
SEMA4D-220ENST00000492386 PSMG3Q9BT73 122 aaPredicted RBP13.63□□□□□ -0.23
SEMA4D-220ENST00000492386 MBNL3Q9NUK0 354 aaKnown RBP13.63□□□□□ -0.23
SEMA4D-220ENST00000492386 LIN7CQ9NUP9 197 aaKnown RBP13.63□□□□□ -0.23
SEMA4D-220ENST00000492386 KCNS2Q9ULS6 477 aa13.63□□□□□ -0.23
SEMA4D-220ENST00000492386 CXorf65A6NEN9 183 aa13.62□□□□□ -0.23
SEMA4D-220ENST00000492386 KLRC4-KLRK1H3BQV0 150 aa13.62□□□□□ -0.23
SEMA4D-220ENST00000492386 FABP1P07148 127 aa13.62□□□□□ -0.23
SEMA4D-220ENST00000492386 ZNF16P17020 682 aaPredicted RBP13.62□□□□□ -0.23
SEMA4D-220ENST00000492386 GLIPR1P48060 266 aa13.62□□□□□ -0.23
SEMA4D-220ENST00000492386 NCMAPQ5T1S8 102 aa13.62□□□□□ -0.23
SEMA4D-220ENST00000492386 TMEM164Q5U3C3 297 aa13.62□□□□□ -0.23
SEMA4D-220ENST00000492386 FAM90A2PQ658T7 463 aa13.62□□□□□ -0.23
SEMA4D-220ENST00000492386 SSX7Q7RTT5 188 aa13.62□□□□□ -0.23
SEMA4D-220ENST00000492386 Q8IYB0 196 aa13.62□□□□□ -0.23
SEMA4D-220ENST00000492386 MBD3L1Q8WWY6 194 aa13.62□□□□□ -0.23
SEMA4D-220ENST00000492386 WDYHV1Q96HA8 205 aa13.62□□□□□ -0.23
SEMA4D-220ENST00000492386 DEFB127Q9H1M4 99 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms