RNA–Protein interactions for RNA: ENST00000476391.5

HDAC1-206, Transcript of histone deacetylase 1, humanhuman

TSL 1 (best)

Gene HDAC1, Length 2,409 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-206ENST00000476391 WISP1O95388 367 aa11.85□□□□□ -0.51
HDAC1-206ENST00000476391 IGLV3-1P01715 115 aa11.85□□□□□ -0.51
HDAC1-206ENST00000476391 PSG1P11464 419 aa11.85□□□□□ -0.51
HDAC1-206ENST00000476391 ADH5P11766 374 aa11.85□□□□□ -0.51
HDAC1-206ENST00000476391 HYAL1Q12794 435 aa11.85□□□□□ -0.51
HDAC1-206ENST00000476391 ASCL4Q6XD76 172 aa11.85□□□□□ -0.51
HDAC1-206ENST00000476391 PNPLA5Q7Z6Z6 429 aaPredicted RBP11.85□□□□□ -0.51
HDAC1-206ENST00000476391 NIT1Q86X76 327 aa11.85□□□□□ -0.51
HDAC1-206ENST00000476391 MUC15Q8N387 334 aa11.85□□□□□ -0.51
HDAC1-206ENST00000476391 SPSB1Q96BD6 273 aa11.85□□□□□ -0.51
HDAC1-206ENST00000476391 CACNA1IQ9P0X4 2223 aa11.84□□□□□ -0.51
HDAC1-206ENST00000476391 EML2O95834 649 aa11.84□□□□□ -0.51
HDAC1-206ENST00000476391 PRRX1P54821 245 aa11.84□□□□□ -0.51
HDAC1-206ENST00000476391 OR10G6Q8NH81 332 aa11.84□□□□□ -0.51
HDAC1-206ENST00000476391 NAT6Q93015 286 aa11.84□□□□□ -0.51
HDAC1-206ENST00000476391 SFRP2Q96HF1 295 aa11.84□□□□□ -0.51
HDAC1-206ENST00000476391 UHRF2Q96PU4 802 aa11.84□□□□□ -0.51
HDAC1-206ENST00000476391 DOCK11Q5JSL3 2073 aa11.84□□□□□ -0.51
HDAC1-206ENST00000476391 LOC102725191A0A1B0GVB3 256 aa11.84□□□□□ -0.51
HDAC1-206ENST00000476391 A0A1W2PQD3 144 aa11.84□□□□□ -0.51
HDAC1-206ENST00000476391 C17orf105B2RV13 164 aa11.84□□□□□ -0.51
HDAC1-206ENST00000476391 IGKV1D-33P01593 117 aa11.84□□□□□ -0.51
HDAC1-206ENST00000476391 IGKV1-33P01594 117 aa11.84□□□□□ -0.51
HDAC1-206ENST00000476391 CBLN1P23435 193 aa11.84□□□□□ -0.51
HDAC1-206ENST00000476391 DRD3P35462 400 aa11.84□□□□□ -0.51
HDAC1-206ENST00000476391 POU3F1Q03052 451 aaPredicted RBP11.84□□□□□ -0.51
HDAC1-206ENST00000476391 GPM6BQ13491 265 aa11.84□□□□□ -0.51
HDAC1-206ENST00000476391 PMCHL1Q16048 86 aa11.84□□□□□ -0.51
HDAC1-206ENST00000476391 RAET1LQ5VY80 246 aa11.84□□□□□ -0.51
HDAC1-206ENST00000476391 CADM4Q8NFZ8 388 aa11.84□□□□□ -0.51
HDAC1-206ENST00000476391 OR5D13Q8NGL4 314 aa11.84□□□□□ -0.51
HDAC1-206ENST00000476391 TAF15Q92804 592 aaKnown RBP eCLIP11.84□□□□□ -0.51
HDAC1-206ENST00000476391 FAM103A1Q9BTL3 118 aaKnown RBP11.84□□□□□ -0.51
HDAC1-206ENST00000476391 NXF5Q9H1B4 397 aaKnown RBP11.84□□□□□ -0.51
HDAC1-206ENST00000476391 STARD5Q9NSY2 213 aa11.84□□□□□ -0.51
HDAC1-206ENST00000476391 MED29Q9NX70 200 aa11.84□□□□□ -0.51
HDAC1-206ENST00000476391 AQP7P3A6NL99 342 aa11.83□□□□□ -0.52
HDAC1-206ENST00000476391 ZNF891A8MT65 544 aaPredicted RBP11.83□□□□□ -0.52
HDAC1-206ENST00000476391 HCRTR1O43613 425 aa11.83□□□□□ -0.52
HDAC1-206ENST00000476391 PVRP15151 417 aa11.83□□□□□ -0.52
HDAC1-206ENST00000476391 ANOS1P23352 680 aa11.83□□□□□ -0.52
HDAC1-206ENST00000476391 ARR3P36575 388 aa11.83□□□□□ -0.52
HDAC1-206ENST00000476391 GRB2P62993 217 aaKnown RBP11.83□□□□□ -0.52
HDAC1-206ENST00000476391 TLE3Q04726 772 aa11.83□□□□□ -0.52
HDAC1-206ENST00000476391 C17orf99Q6UX52 265 aa11.83□□□□□ -0.52
HDAC1-206ENST00000476391 H1FNTQ75WM6 255 aaPredicted RBP11.83□□□□□ -0.52
HDAC1-206ENST00000476391 OR4F17Q8NGA8 305 aa11.83□□□□□ -0.52
HDAC1-206ENST00000476391 THAP3Q8WTV1 239 aaPredicted RBP11.83□□□□□ -0.52
HDAC1-206ENST00000476391 C10orf35Q96D05 121 aa11.83□□□□□ -0.52
HDAC1-206ENST00000476391 LIN37Q96GY3 246 aaPredicted RBP11.83□□□□□ -0.52
HDAC1-206ENST00000476391 HCFC1R1Q9NWW0 138 aa11.83□□□□□ -0.52
HDAC1-206ENST00000476391 PDE4DIPQ5VU43 2346 aa11.83□□□□□ -0.52
HDAC1-206ENST00000476391 TRBV9A0A0B4J1U6 114 aa11.82□□□□□ -0.52
HDAC1-206ENST00000476391 MDFIC2A0A1B0GVS7 189 aa11.82□□□□□ -0.52
HDAC1-206ENST00000476391 KIAA1324LA8MWY0 1029 aaPredicted RBP11.82□□□□□ -0.52
HDAC1-206ENST00000476391 C1QTNF9BB2RNN3 333 aa11.82□□□□□ -0.52
HDAC1-206ENST00000476391 PDE6DO43924 150 aa11.82□□□□□ -0.52
HDAC1-206ENST00000476391 DHRS3O75911 302 aa11.82□□□□□ -0.52
HDAC1-206ENST00000476391 POU2F2P09086 479 aa11.82□□□□□ -0.52
HDAC1-206ENST00000476391 CTXN2P0C2S0 81 aa11.82□□□□□ -0.52
HDAC1-206ENST00000476391 IL11P20809 199 aa11.82□□□□□ -0.52
HDAC1-206ENST00000476391 AMTP48728 403 aa11.82□□□□□ -0.52
HDAC1-206ENST00000476391 ZNF596Q8TC21 504 aa11.82□□□□□ -0.52
HDAC1-206ENST00000476391 LRFN3Q9BTN0 628 aa11.82□□□□□ -0.52
HDAC1-206ENST00000476391 PNRC2Q9NPJ4 139 aaKnown RBP11.82□□□□□ -0.52
HDAC1-206ENST00000476391 FRG2CA6NGY1 282 aa11.82□□□□□ -0.52
HDAC1-206ENST00000476391 ALG1L2C9J202 215 aa11.82□□□□□ -0.52
HDAC1-206ENST00000476391 C17orf112F2Z3M2 114 aa11.82□□□□□ -0.52
HDAC1-206ENST00000476391 CORTO00230 105 aa11.82□□□□□ -0.52
HDAC1-206ENST00000476391 TRAF3IP2O43734 574 aaPredicted RBP11.82□□□□□ -0.52
HDAC1-206ENST00000476391 PAGE4O60829 102 aa11.82□□□□□ -0.52
HDAC1-206ENST00000476391 CD46P15529 392 aa11.82□□□□□ -0.52
HDAC1-206ENST00000476391 GLB1P16278 677 aa11.82□□□□□ -0.52
HDAC1-206ENST00000476391 KITLGP21583 273 aa11.82□□□□□ -0.52
HDAC1-206ENST00000476391 MSR1P21757 451 aa11.82□□□□□ -0.52
HDAC1-206ENST00000476391 NPPCP23582 126 aa11.82□□□□□ -0.52
HDAC1-206ENST00000476391 TLE1Q04724 770 aa11.82□□□□□ -0.52
HDAC1-206ENST00000476391 DLX2Q07687 328 aaPredicted RBP11.82□□□□□ -0.52
HDAC1-206ENST00000476391 ARL16Q0P5N6 197 aa11.82□□□□□ -0.52
HDAC1-206ENST00000476391 PRTGQ2VWP7 1150 aa11.82□□□□□ -0.52
HDAC1-206ENST00000476391 OR10J3Q5JRS4 329 aa11.82□□□□□ -0.52
HDAC1-206ENST00000476391 OR4A47Q6IF82 309 aa11.82□□□□□ -0.52
HDAC1-206ENST00000476391 C19orf35Q6ZS72 473 aa11.82□□□□□ -0.52
HDAC1-206ENST00000476391 ABHD3Q8WU67 409 aa11.82□□□□□ -0.52
HDAC1-206ENST00000476391 PIGTQ969N2 578 aa11.82□□□□□ -0.52
HDAC1-206ENST00000476391 C11orf94C9JXX5 98 aa11.81□□□□□ -0.52
HDAC1-206ENST00000476391 F2Z2F3 143 aa11.81□□□□□ -0.52
HDAC1-206ENST00000476391 CCL16O15467 120 aa11.81□□□□□ -0.52
HDAC1-206ENST00000476391 ARG2P78540 354 aa11.81□□□□□ -0.52
HDAC1-206ENST00000476391 SMIM21Q3B7S5 101 aa11.81□□□□□ -0.52
HDAC1-206ENST00000476391 TMEM211Q6ICI0 200 aa11.81□□□□□ -0.52
HDAC1-206ENST00000476391 GATAD1Q8WUU5 269 aa11.81□□□□□ -0.52
HDAC1-206ENST00000476391 KLHDC7BQ96G42 594 aa11.81□□□□□ -0.52
HDAC1-206ENST00000476391 KCNS1Q96KK3 526 aa11.81□□□□□ -0.52
HDAC1-206ENST00000476391 LYZL4Q96KX0 146 aa11.81□□□□□ -0.52
HDAC1-206ENST00000476391 MEGF9Q9H1U4 602 aa11.81□□□□□ -0.52
HDAC1-206ENST00000476391 SLC25A22Q9H936 323 aa11.81□□□□□ -0.52
HDAC1-206ENST00000476391 H0Y980 276 aa11.81□□□□□ -0.52
HDAC1-206ENST00000476391 RAMP3O60896 148 aa11.81□□□□□ -0.52
HDAC1-206ENST00000476391 S1PR2O95136 353 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms