RNA–Protein interactions for RNA: ENST00000475298.5

CCNL1-216, Transcript of cyclin L1, humanhuman

TSL 1 (best)

Gene CCNL1, Length 2,362 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-216ENST00000475298 PITX3O75364 302 aa11.13□□□□□ -0.63
CCNL1-216ENST00000475298 TNFSF13O75888 250 aa11.13□□□□□ -0.63
CCNL1-216ENST00000475298 NXPH2O95156 264 aa11.13□□□□□ -0.63
CCNL1-216ENST00000475298 IGHV3-9P01782 118 aa11.13□□□□□ -0.63
CCNL1-216ENST00000475298 SRD5A2P31213 254 aa11.13□□□□□ -0.63
CCNL1-216ENST00000475298 CHRFAM7AQ494W8 412 aa11.13□□□□□ -0.63
CCNL1-216ENST00000475298 RTL6Q6ICC9 239 aa11.13□□□□□ -0.63
CCNL1-216ENST00000475298 BRICD5Q6PL45 260 aa11.13□□□□□ -0.63
CCNL1-216ENST00000475298 OR10D3Q8NH80 312 aa11.13□□□□□ -0.63
CCNL1-216ENST00000475298 DYRK2Q92630 601 aa11.13□□□□□ -0.63
CCNL1-216ENST00000475298 EXTL1Q92935 676 aa11.13□□□□□ -0.63
CCNL1-216ENST00000475298 SDSLQ96GA7 329 aa11.13□□□□□ -0.63
CCNL1-216ENST00000475298 YPEL2Q96QA6 119 aa11.13□□□□□ -0.63
CCNL1-216ENST00000475298 TM2D1Q9BX74 207 aa11.13□□□□□ -0.63
CCNL1-216ENST00000475298 TMEM38BQ9NVV0 291 aa11.13□□□□□ -0.63
CCNL1-216ENST00000475298 A8MXE2 369 aa11.13□□□□□ -0.63
CCNL1-216ENST00000475298 TUBG1P23258 451 aa11.13□□□□□ -0.63
CCNL1-216ENST00000475298 CHRNB4P30926 498 aa11.13□□□□□ -0.63
CCNL1-216ENST00000475298 PLA2G5P39877 138 aa11.13□□□□□ -0.63
CCNL1-216ENST00000475298 RRADP55042 308 aa11.13□□□□□ -0.63
CCNL1-216ENST00000475298 PIGPP57054 158 aa11.13□□□□□ -0.63
CCNL1-216ENST00000475298 COL5A1-AS1Q5SY13 56 aa11.13□□□□□ -0.63
CCNL1-216ENST00000475298 LEMD1Q68G75 181 aa11.13□□□□□ -0.63
CCNL1-216ENST00000475298 SSX7Q7RTT5 188 aa11.13□□□□□ -0.63
CCNL1-216ENST00000475298 AAED1Q7RTV5 226 aa11.13□□□□□ -0.63
CCNL1-216ENST00000475298 OR2C3Q8N628 320 aa11.13□□□□□ -0.63
CCNL1-216ENST00000475298 OR1F12Q8NHA8 337 aa11.13□□□□□ -0.63
CCNL1-216ENST00000475298 ABHD3Q8WU67 409 aa11.13□□□□□ -0.63
CCNL1-216ENST00000475298 CT55Q8WUE5 264 aa11.13□□□□□ -0.63
CCNL1-216ENST00000475298 SGCZQ96LD1 299 aa11.13□□□□□ -0.63
CCNL1-216ENST00000475298 PCGF1Q9BSM1 259 aa11.13□□□□□ -0.63
CCNL1-216ENST00000475298 PLEKHJ1Q9NW61 149 aa11.13□□□□□ -0.63
CCNL1-216ENST00000475298 CISD1Q9NZ45 108 aaKnown RBP11.13□□□□□ -0.63
CCNL1-216ENST00000475298 NKX6-3A6NJ46 265 aa11.12□□□□□ -0.63
CCNL1-216ENST00000475298 C19orf67A6NJJ6 358 aa11.12□□□□□ -0.63
CCNL1-216ENST00000475298 GJE1A6NN92 205 aa11.12□□□□□ -0.63
CCNL1-216ENST00000475298 ZNF705FA8MVS1 300 aaPredicted RBP11.12□□□□□ -0.63
CCNL1-216ENST00000475298 NUPR1O60356 82 aa11.12□□□□□ -0.63
CCNL1-216ENST00000475298 NDUFB8O95169 186 aa11.12□□□□□ -0.63
CCNL1-216ENST00000475298 ZNF705DP0CH99 300 aaPredicted RBP11.12□□□□□ -0.63
CCNL1-216ENST00000475298 ZNF705BP0CI00 300 aaPredicted RBP11.12□□□□□ -0.63
CCNL1-216ENST00000475298 OMGP23515 440 aa11.12□□□□□ -0.63
CCNL1-216ENST00000475298 DUSP1P28562 367 aa11.12□□□□□ -0.63
CCNL1-216ENST00000475298 IDH3GP51553 393 aaPredicted RBP11.12□□□□□ -0.63
CCNL1-216ENST00000475298 UCP3P55916 312 aa11.12□□□□□ -0.63
CCNL1-216ENST00000475298 FAM3BP58499 235 aaPredicted RBP11.12□□□□□ -0.63
CCNL1-216ENST00000475298 FAM189A2Q15884 450 aa11.12□□□□□ -0.63
CCNL1-216ENST00000475298 CEACAM16Q2WEN9 425 aa11.12□□□□□ -0.63
CCNL1-216ENST00000475298 TSPO2Q5TGU0 170 aa11.12□□□□□ -0.63
CCNL1-216ENST00000475298 Q6ZSR3 168 aa11.12□□□□□ -0.63
CCNL1-216ENST00000475298 BATF2Q8N1L9 274 aa11.12□□□□□ -0.63
CCNL1-216ENST00000475298 LRTM2Q8N967 370 aa11.12□□□□□ -0.63
CCNL1-216ENST00000475298 OR4D5Q8NGN0 318 aa11.12□□□□□ -0.63
CCNL1-216ENST00000475298 Q96M66 194 aa11.12□□□□□ -0.63
CCNL1-216ENST00000475298 GLRX2Q9NS18 164 aa11.12□□□□□ -0.63
CCNL1-216ENST00000475298 FREM1Q5H8C1 2179 aa11.12□□□□□ -0.63
CCNL1-216ENST00000475298 KIAA2026Q5HYC2 2103 aa11.12□□□□□ -0.63
CCNL1-216ENST00000475298 SERPINE3A8MV23 424 aa11.12□□□□□ -0.63
CCNL1-216ENST00000475298 K7EP13 123 aa11.12□□□□□ -0.63
CCNL1-216ENST00000475298 CNOT4O95628 575 aaKnown RBP11.12□□□□□ -0.63
CCNL1-216ENST00000475298 HBE1P02100 147 aa11.12□□□□□ -0.63
CCNL1-216ENST00000475298 GLI4P10075 376 aa11.12□□□□□ -0.63
CCNL1-216ENST00000475298 OPRM1P35372 400 aa11.12□□□□□ -0.63
CCNL1-216ENST00000475298 ECI1P42126 302 aa11.12□□□□□ -0.63
CCNL1-216ENST00000475298 PTTG1IPP53801 180 aa11.12□□□□□ -0.63
CCNL1-216ENST00000475298 PSG4Q00888 419 aa11.12□□□□□ -0.63
CCNL1-216ENST00000475298 PDCD1Q15116 288 aa11.12□□□□□ -0.63
CCNL1-216ENST00000475298 MPV17LQ2QL34 196 aa11.12□□□□□ -0.63
CCNL1-216ENST00000475298 DCAF12Q5T6F0 453 aa11.12□□□□□ -0.63
CCNL1-216ENST00000475298 CENPVQ7Z7K6 275 aaPredicted RBP11.12□□□□□ -0.63
CCNL1-216ENST00000475298 ODF3L1Q8IXM7 274 aa11.12□□□□□ -0.63
CCNL1-216ENST00000475298 CMTM1Q8IZ96 169 aa11.12□□□□□ -0.63
CCNL1-216ENST00000475298 IL22RA1Q8N6P7 574 aa11.12□□□□□ -0.63
CCNL1-216ENST00000475298 ZCCHC14Q8WYQ9 949 aaKnown RBP11.12□□□□□ -0.63
CCNL1-216ENST00000475298 SF3B5Q9BWJ5 86 aaKnown RBP11.12□□□□□ -0.63
CCNL1-216ENST00000475298 NAA60Q9H7X0 242 aa11.12□□□□□ -0.63
CCNL1-216ENST00000475298 LOXL2Q9Y4K0 774 aa11.12□□□□□ -0.63
CCNL1-216ENST00000475298 RNF115Q9Y4L5 304 aa11.12□□□□□ -0.63
CCNL1-216ENST00000475298 TRAV1-1A0A0B4J248 108 aa11.11□□□□□ -0.63
CCNL1-216ENST00000475298 A0A1B0GUS0 222 aa11.11□□□□□ -0.63
CCNL1-216ENST00000475298 PROB1E7EW31 1015 aa11.11□□□□□ -0.63
CCNL1-216ENST00000475298 BCL2P10415 239 aa11.11□□□□□ -0.63
CCNL1-216ENST00000475298 CD33P20138 364 aa11.11□□□□□ -0.63
CCNL1-216ENST00000475298 GDF1P27539 372 aa11.11□□□□□ -0.63
CCNL1-216ENST00000475298 TMEM241Q24JQ0 296 aa11.11□□□□□ -0.63
CCNL1-216ENST00000475298 CLEC12BQ2HXU8 276 aa11.11□□□□□ -0.63
CCNL1-216ENST00000475298 SPINK14Q6IE38 97 aa11.11□□□□□ -0.63
CCNL1-216ENST00000475298 SLC23A3Q6PIS1 610 aa11.11□□□□□ -0.63
CCNL1-216ENST00000475298 TEX43Q6ZNM6 134 aa11.11□□□□□ -0.63
CCNL1-216ENST00000475298 C1orf210Q8IVY1 113 aa11.11□□□□□ -0.63
CCNL1-216ENST00000475298 TMEM256Q8N2U0 113 aa11.11□□□□□ -0.63
CCNL1-216ENST00000475298 FOXB1Q99853 325 aa11.11□□□□□ -0.63
CCNL1-216ENST00000475298 TECTAO75443 2155 aa11.11□□□□□ -0.63
CCNL1-216ENST00000475298 COL27A1Q8IZC6 1860 aaPredicted RBP11.11□□□□□ -0.63
CCNL1-216ENST00000475298 C20orf202A1L168 122 aa11.11□□□□□ -0.63
CCNL1-216ENST00000475298 ZFP92A6NM28 416 aa11.11□□□□□ -0.63
CCNL1-216ENST00000475298 RRP8O43159 456 aaKnown RBP11.11□□□□□ -0.63
CCNL1-216ENST00000475298 HNF1AP20823 631 aa11.11□□□□□ -0.63
CCNL1-216ENST00000475298 PIGYQ3MUY2 71 aa11.11□□□□□ -0.63
CCNL1-216ENST00000475298 MSI2Q96DH6 328 aaKnown RBP11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms