RNA–Protein interactions for RNA: ENST00000474246.1

SMARCE1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 2,124 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-208ENST00000474246 THAP6Q8TBB0 222 aa5.12□□□□□ -1.59
SMARCE1-208ENST00000474246 THEM6Q8WUY1 208 aa5.12□□□□□ -1.59
SMARCE1-208ENST00000474246 TSACCQ96A04 125 aaPredicted RBP5.12□□□□□ -1.59
SMARCE1-208ENST00000474246 KAZALD1Q96I82 304 aa5.12□□□□□ -1.59
SMARCE1-208ENST00000474246 PSMB7Q99436 277 aa5.12□□□□□ -1.59
SMARCE1-208ENST00000474246 KCTD14Q9BQ13 255 aaPredicted RBP5.12□□□□□ -1.59
SMARCE1-208ENST00000474246 PDCD1LG2Q9BQ51 273 aa5.12□□□□□ -1.59
SMARCE1-208ENST00000474246 FBXL15Q9H469 300 aa5.12□□□□□ -1.59
SMARCE1-208ENST00000474246 VSIRQ9H7M9 311 aa5.12□□□□□ -1.59
SMARCE1-208ENST00000474246 ZNF442Q9H7R0 627 aa5.12□□□□□ -1.59
SMARCE1-208ENST00000474246 CXorf21Q9HAI6 301 aa5.12□□□□□ -1.59
SMARCE1-208ENST00000474246 PELI2Q9HAT8 420 aa5.12□□□□□ -1.59
SMARCE1-208ENST00000474246 SH2D2AQ9NP31 389 aa5.12□□□□□ -1.59
SMARCE1-208ENST00000474246 DMAC2Q9NW81 257 aa5.12□□□□□ -1.59
SMARCE1-208ENST00000474246 GAGE2DQ9UEU5 116 aa5.12□□□□□ -1.59
SMARCE1-208ENST00000474246 Q9UF83 564 aa5.12□□□□□ -1.59
SMARCE1-208ENST00000474246 BOKQ9UMX3 212 aaPredicted RBP5.12□□□□□ -1.59
SMARCE1-208ENST00000474246 PTPRBP23467 1997 aa5.12□□□□□ -1.59
SMARCE1-208ENST00000474246 ADGRG4Q8IZF6 3080 aa5.11□□□□□ -1.59
SMARCE1-208ENST00000474246 D6RAR5 112 aa5.11□□□□□ -1.59
SMARCE1-208ENST00000474246 J3QR89 54 aa5.11□□□□□ -1.59
SMARCE1-208ENST00000474246 GSC2O15499 205 aa5.11□□□□□ -1.59
SMARCE1-208ENST00000474246 KBTBD11O94819 623 aa5.11□□□□□ -1.59
SMARCE1-208ENST00000474246 CDRT1O95170 752 aa5.11□□□□□ -1.59
SMARCE1-208ENST00000474246 OR4Q2P0C623 313 aa5.11□□□□□ -1.59
SMARCE1-208ENST00000474246 ZGLP1P0C6A0 271 aa5.11□□□□□ -1.59
SMARCE1-208ENST00000474246 ATP6V0CP27449 155 aa5.11□□□□□ -1.59
SMARCE1-208ENST00000474246 MIPP30301 263 aa5.11□□□□□ -1.59
SMARCE1-208ENST00000474246 RPL3P39023 403 aaKnown RBP5.11□□□□□ -1.59
SMARCE1-208ENST00000474246 OR1D4P47884 311 aa5.11□□□□□ -1.59
SMARCE1-208ENST00000474246 REG1BP48304 166 aa5.11□□□□□ -1.59
SMARCE1-208ENST00000474246 SSR4P51571 173 aa5.11□□□□□ -1.59
SMARCE1-208ENST00000474246 PNRC1Q12796 327 aaPredicted RBP5.11□□□□□ -1.59
SMARCE1-208ENST00000474246 NECTIN1Q15223 517 aa5.11□□□□□ -1.59
SMARCE1-208ENST00000474246 SIX1Q15475 284 aaPredicted RBP5.11□□□□□ -1.59
SMARCE1-208ENST00000474246 SFRP4Q6FHJ7 346 aaPredicted RBP5.11□□□□□ -1.59
SMARCE1-208ENST00000474246 LCN10Q6JVE6 187 aa5.11□□□□□ -1.59
SMARCE1-208ENST00000474246 FBXL22Q6P050 247 aa5.11□□□□□ -1.59
SMARCE1-208ENST00000474246 TMUB2Q71RG4 321 aa5.11□□□□□ -1.59
SMARCE1-208ENST00000474246 MMGT1Q8N4V1 131 aa5.11□□□□□ -1.59
SMARCE1-208ENST00000474246 OR8D4Q8NGM9 314 aa5.11□□□□□ -1.59
SMARCE1-208ENST00000474246 OR2T4Q8NH00 348 aa5.11□□□□□ -1.59
SMARCE1-208ENST00000474246 RHOXF1Q8NHV9 184 aa5.11□□□□□ -1.59
SMARCE1-208ENST00000474246 ZNF564Q8TBZ8 553 aaPredicted RBP5.11□□□□□ -1.59
SMARCE1-208ENST00000474246 PIFOQ8TCI5 191 aa5.11□□□□□ -1.59
SMARCE1-208ENST00000474246 SLC37A2Q8TED4 501 aa5.11□□□□□ -1.59
SMARCE1-208ENST00000474246 OR5P3Q8WZ94 311 aa5.11□□□□□ -1.59
SMARCE1-208ENST00000474246 BORCS7Q96B45 105 aa5.11□□□□□ -1.59
SMARCE1-208ENST00000474246 LINC00477Q96M19 166 aa5.11□□□□□ -1.59
SMARCE1-208ENST00000474246 OR4K3Q96R72 315 aa5.11□□□□□ -1.59
SMARCE1-208ENST00000474246 S100A13Q99584 98 aa5.11□□□□□ -1.59
SMARCE1-208ENST00000474246 FOXC2Q99958 501 aa5.11□□□□□ -1.59
SMARCE1-208ENST00000474246 ANAPC13Q9BS18 74 aa5.11□□□□□ -1.59
SMARCE1-208ENST00000474246 AGMATQ9BSE5 352 aa5.11□□□□□ -1.59
SMARCE1-208ENST00000474246 GTSF1LQ9H1H1 148 aa5.11□□□□□ -1.59
SMARCE1-208ENST00000474246 OR51I2Q9H344 312 aa5.11□□□□□ -1.59
SMARCE1-208ENST00000474246 GALNT9Q9HCQ5 603 aa5.11□□□□□ -1.59
SMARCE1-208ENST00000474246 MMP26Q9NRE1 261 aa5.11□□□□□ -1.59
SMARCE1-208ENST00000474246 PKD1L1Q8TDX9 2849 aa5.11□□□□□ -1.59
SMARCE1-208ENST00000474246 ASCC3Q8N3C0 2202 aaKnown RBP5.11□□□□□ -1.59
SMARCE1-208ENST00000474246 SPENQ96T58 3664 aaKnown RBP5.11□□□□□ -1.59
SMARCE1-208ENST00000474246 EVPLQ92817 2033 aa5.11□□□□□ -1.59
SMARCE1-208ENST00000474246 A0A1B0GTH9 108 aa5.11□□□□□ -1.59
SMARCE1-208ENST00000474246 SAP18O00422 153 aaKnown RBP5.11□□□□□ -1.59
SMARCE1-208ENST00000474246 GAPDHSO14556 408 aaPredicted RBP5.11□□□□□ -1.59
SMARCE1-208ENST00000474246 HSD17B6O14756 317 aa5.11□□□□□ -1.59
SMARCE1-208ENST00000474246 OR5AC1P0C628 307 aa5.11□□□□□ -1.59
SMARCE1-208ENST00000474246 RPL7P18124 248 aaKnown RBP5.11□□□□□ -1.59
SMARCE1-208ENST00000474246 EDNRAP25101 427 aa5.11□□□□□ -1.59
SMARCE1-208ENST00000474246 RAB38P57729 211 aa5.11□□□□□ -1.59
SMARCE1-208ENST00000474246 Q6ZSR6 202 aa5.11□□□□□ -1.59
SMARCE1-208ENST00000474246 AMIGO2Q86SJ2 522 aa5.11□□□□□ -1.59
SMARCE1-208ENST00000474246 CLEC14AQ86T13 490 aa5.11□□□□□ -1.59
SMARCE1-208ENST00000474246 OR4K17Q8NGC6 315 aa5.11□□□□□ -1.59
SMARCE1-208ENST00000474246 OR5M3Q8NGP4 307 aa5.11□□□□□ -1.59
SMARCE1-208ENST00000474246 RDH11Q8TC12 318 aa5.11□□□□□ -1.59
SMARCE1-208ENST00000474246 GPR148Q8TDV2 347 aa5.11□□□□□ -1.59
SMARCE1-208ENST00000474246 TMEM174Q8WUU8 243 aa5.11□□□□□ -1.59
SMARCE1-208ENST00000474246 SCGB3A2Q96PL1 93 aa5.11□□□□□ -1.59
SMARCE1-208ENST00000474246 FAM173AQ9BQD7 235 aa5.11□□□□□ -1.59
SMARCE1-208ENST00000474246 C1QTNF4Q9BXJ3 329 aa5.11□□□□□ -1.59
SMARCE1-208ENST00000474246 OR2D2Q9H210 308 aa5.11□□□□□ -1.59
SMARCE1-208ENST00000474246 TUBA4BQ9H853 241 aa5.11□□□□□ -1.59
SMARCE1-208ENST00000474246 HEXA-AS1Q9H8Q6 139 aa5.11□□□□□ -1.59
SMARCE1-208ENST00000474246 HES4Q9HCC6 221 aa5.11□□□□□ -1.59
SMARCE1-208ENST00000474246 SMCO4Q9NRQ5 59 aa5.11□□□□□ -1.59
SMARCE1-208ENST00000474246 ACER3Q9NUN7 267 aa5.11□□□□□ -1.59
SMARCE1-208ENST00000474246 COMMD9Q9P000 198 aa5.11□□□□□ -1.59
SMARCE1-208ENST00000474246 PCYOX1Q9UHG3 505 aa5.11□□□□□ -1.59
SMARCE1-208ENST00000474246 MMP17Q9ULZ9 603 aa5.11□□□□□ -1.59
SMARCE1-208ENST00000474246 POLR1DQ9Y2S0 133 aa5.11□□□□□ -1.59
SMARCE1-208ENST00000474246 SNX11Q9Y5W9 270 aa5.11□□□□□ -1.59
SMARCE1-208ENST00000474246 SIRT4Q9Y6E7 314 aaPredicted RBP5.11□□□□□ -1.59
SMARCE1-208ENST00000474246 SCN10AQ9Y5Y9 1956 aa5.11□□□□□ -1.59
SMARCE1-208ENST00000474246 C11orf97A0A1B0GVM6 126 aaPredicted RBP5.1□□□□□ -1.59
SMARCE1-208ENST00000474246 OR5B21A6NL26 309 aa5.1□□□□□ -1.59
SMARCE1-208ENST00000474246 COLCA2A8K830 154 aa5.1□□□□□ -1.59
SMARCE1-208ENST00000474246 PATE3B3GLJ2 98 aa5.1□□□□□ -1.59
SMARCE1-208ENST00000474246 C1RP00736 705 aa5.1□□□□□ -1.59
SMARCE1-208ENST00000474246 PRTN3P24158 256 aa5.1□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 121.9 ms