RNA–Protein interactions for RNA: ENST00000467819.5

COL9A3-207, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 1 (best)

Gene COL9A3, Length 993 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-207ENST00000467819 RYR3Q15413 4870 aa16.48■□□□□ 0.23
COL9A3-207ENST00000467819 IGHG4P01861 327 aa16.48■□□□□ 0.23
COL9A3-207ENST00000467819 SLC2A2P11168 524 aaPredicted RBP16.48■□□□□ 0.23
COL9A3-207ENST00000467819 RCC1P18754 421 aaPredicted RBP16.48■□□□□ 0.23
COL9A3-207ENST00000467819 CFHR3Q02985 330 aa16.48■□□□□ 0.23
COL9A3-207ENST00000467819 MED21Q13503 144 aa16.48■□□□□ 0.23
COL9A3-207ENST00000467819 TMEM30BQ3MIR4 351 aa16.48■□□□□ 0.23
COL9A3-207ENST00000467819 C9orf66Q5T8R8 295 aa16.48■□□□□ 0.23
COL9A3-207ENST00000467819 CYGBQ8WWM9 190 aa16.48■□□□□ 0.23
COL9A3-207ENST00000467819 MRPS24Q96EL2 167 aaKnown RBP16.48■□□□□ 0.23
COL9A3-207ENST00000467819 TMEM80Q96HE8 168 aa16.48■□□□□ 0.23
COL9A3-207ENST00000467819 SELENOIQ9C0D9 397 aa16.48■□□□□ 0.23
COL9A3-207ENST00000467819 TRBV5-7A0A0A0MS05 114 aa16.47■□□□□ 0.23
COL9A3-207ENST00000467819 UBE2QL1A1L167 161 aa16.47■□□□□ 0.23
COL9A3-207ENST00000467819 SEC14L6B5MCN3 397 aa16.47■□□□□ 0.23
COL9A3-207ENST00000467819 MAS1P04201 325 aa16.47■□□□□ 0.23
COL9A3-207ENST00000467819 VHLP40337 213 aa16.47■□□□□ 0.23
COL9A3-207ENST00000467819 ADARB1P78563 741 aaKnown RBP16.47■□□□□ 0.23
COL9A3-207ENST00000467819 LSAMPQ13449 338 aa16.47■□□□□ 0.23
COL9A3-207ENST00000467819 TRAT1Q6PIZ9 186 aa16.47■□□□□ 0.23
COL9A3-207ENST00000467819 C4orf3Q8WVX3 66 aa16.47■□□□□ 0.23
COL9A3-207ENST00000467819 KCTD7Q96MP8 289 aa16.47■□□□□ 0.23
COL9A3-207ENST00000467819 ZNF107Q9UII5 783 aaPredicted RBP16.47■□□□□ 0.23
COL9A3-207ENST00000467819 CRTAPO75718 401 aaPredicted RBP16.46■□□□□ 0.23
COL9A3-207ENST00000467819 MGMTP16455 207 aa16.46■□□□□ 0.23
COL9A3-207ENST00000467819 ECI1P42126 302 aa16.46■□□□□ 0.23
COL9A3-207ENST00000467819 GNMTQ14749 295 aa16.46■□□□□ 0.23
COL9A3-207ENST00000467819 MMDQ15546 238 aa16.46■□□□□ 0.23
COL9A3-207ENST00000467819 C5orf24Q7Z6I8 188 aa16.46■□□□□ 0.23
COL9A3-207ENST00000467819 GAPTQ8N292 157 aa16.46■□□□□ 0.23
COL9A3-207ENST00000467819 TAF9BQ9HBM6 251 aa16.46■□□□□ 0.23
COL9A3-207ENST00000467819 OR2S2Q9NQN1 319 aa16.46■□□□□ 0.23
COL9A3-207ENST00000467819 LANCL1O43813 399 aa16.45■□□□□ 0.22
COL9A3-207ENST00000467819 IGF1P05019 195 aa16.45■□□□□ 0.22
COL9A3-207ENST00000467819 PSMB8P28062 276 aa16.45■□□□□ 0.22
COL9A3-207ENST00000467819 LRRC36Q1X8D7 754 aa16.45■□□□□ 0.22
COL9A3-207ENST00000467819 ZNF485Q8NCK3 441 aa16.45■□□□□ 0.22
COL9A3-207ENST00000467819 OR52L2PQ8NGH6 319 aa16.45■□□□□ 0.22
COL9A3-207ENST00000467819 Q96M66 194 aa16.45■□□□□ 0.22
COL9A3-207ENST00000467819 SORL1Q92673 2214 aa16.45■□□□□ 0.22
COL9A3-207ENST00000467819 FAM90A10PA6NDY2 464 aa16.44■□□□□ 0.22
COL9A3-207ENST00000467819 FAM90A7PA6NKC0 464 aa16.44■□□□□ 0.22
COL9A3-207ENST00000467819 FAM90A23PA8MXZ1 464 aa16.44■□□□□ 0.22
COL9A3-207ENST00000467819 SC5DO75845 299 aa16.44■□□□□ 0.22
COL9A3-207ENST00000467819 OR5H8P0DN80 308 aa16.44■□□□□ 0.22
COL9A3-207ENST00000467819 FUT3P21217 361 aa16.44■□□□□ 0.22
COL9A3-207ENST00000467819 PPP1CCP36873 323 aaKnown RBP16.44■□□□□ 0.22
COL9A3-207ENST00000467819 CAPGP40121 348 aa16.44■□□□□ 0.22
COL9A3-207ENST00000467819 MORN2Q502X0 79 aa16.44■□□□□ 0.22
COL9A3-207ENST00000467819 SIGIRRQ6IA17 410 aa16.44■□□□□ 0.22
COL9A3-207ENST00000467819 OR11H1Q8NG94 326 aa16.44■□□□□ 0.22
COL9A3-207ENST00000467819 GGHQ92820 318 aa16.44■□□□□ 0.22
COL9A3-207ENST00000467819 FAM46BQ96A09 425 aa16.44■□□□□ 0.22
COL9A3-207ENST00000467819 DERL3Q96Q80 235 aa16.44■□□□□ 0.22
COL9A3-207ENST00000467819 ABHD14AQ9BUJ0 271 aa16.44■□□□□ 0.22
COL9A3-207ENST00000467819 KCNIP1Q9NZI2 227 aa16.44■□□□□ 0.22
COL9A3-207ENST00000467819 LSM4Q9Y4Z0 139 aaKnown RBP16.44■□□□□ 0.22
COL9A3-207ENST00000467819 WSB1Q9Y6I7 421 aa16.44■□□□□ 0.22
COL9A3-207ENST00000467819 CA11O75493 328 aa16.43■□□□□ 0.22
COL9A3-207ENST00000467819 NHLRC4P0CG21 123 aaPredicted RBP16.43■□□□□ 0.22
COL9A3-207ENST00000467819 CNTFRP26992 372 aa16.43■□□□□ 0.22
COL9A3-207ENST00000467819 TAS2R43P59537 309 aa16.43■□□□□ 0.22
COL9A3-207ENST00000467819 ST3GAL4Q11206 333 aa16.43■□□□□ 0.22
COL9A3-207ENST00000467819 FHL3Q13643 280 aa16.43■□□□□ 0.22
COL9A3-207ENST00000467819 ZNF260Q3ZCT1 412 aa16.43■□□□□ 0.22
COL9A3-207ENST00000467819 TTC23Q5W5X9 447 aa16.43■□□□□ 0.22
COL9A3-207ENST00000467819 STEAP3Q658P3 488 aa16.43■□□□□ 0.22
COL9A3-207ENST00000467819 SETD9Q8NE22 299 aa16.43■□□□□ 0.22
COL9A3-207ENST00000467819 MRPL20Q9BYC9 149 aaKnown RBP16.43■□□□□ 0.22
COL9A3-207ENST00000467819 MBNL3Q9NUK0 354 aaKnown RBP16.43■□□□□ 0.22
COL9A3-207ENST00000467819 SCOCQ9UIL1 159 aa16.43■□□□□ 0.22
COL9A3-207ENST00000467819 U3KQK5 164 aa16.43■□□□□ 0.22
COL9A3-207ENST00000467819 STAB2Q8WWQ8 2551 aa16.43■□□□□ 0.22
COL9A3-207ENST00000467819 G3V318 75 aa16.42■□□□□ 0.22
COL9A3-207ENST00000467819 PDCD6O75340 191 aa16.42■□□□□ 0.22
COL9A3-207ENST00000467819 ACTBP60709 375 aa16.42■□□□□ 0.22
COL9A3-207ENST00000467819 DOC2BQ14184 412 aa16.42■□□□□ 0.22
COL9A3-207ENST00000467819 NKAPLQ5M9Q1 402 aa16.42■□□□□ 0.22
COL9A3-207ENST00000467819 TMEM65Q6PI78 240 aa16.42■□□□□ 0.22
COL9A3-207ENST00000467819 CDH26Q8IXH8 852 aa16.42■□□□□ 0.22
COL9A3-207ENST00000467819 ODF3L1Q8IXM7 274 aa16.42■□□□□ 0.22
COL9A3-207ENST00000467819 MRPL30Q8TCC3 161 aaKnown RBP16.42■□□□□ 0.22
COL9A3-207ENST00000467819 RITA1Q96K30 269 aa16.42■□□□□ 0.22
COL9A3-207ENST00000467819 OR5B12Q96R08 314 aa16.42■□□□□ 0.22
COL9A3-207ENST00000467819 KLK15Q9H2R5 256 aa16.42■□□□□ 0.22
COL9A3-207ENST00000467819 GNB4Q9HAV0 340 aa16.42■□□□□ 0.22
COL9A3-207ENST00000467819 PARP11Q9NR21 331 aa16.42■□□□□ 0.22
COL9A3-207ENST00000467819 ZNF580Q9UK33 172 aa16.42■□□□□ 0.22
COL9A3-207ENST00000467819 JPT1Q9UK76 154 aa16.42■□□□□ 0.22
COL9A3-207ENST00000467819 ATP6V0E1O15342 81 aa16.41■□□□□ 0.22
COL9A3-207ENST00000467819 GLAP06280 429 aa16.41■□□□□ 0.22
COL9A3-207ENST00000467819 CELP19835 753 aa16.41■□□□□ 0.22
COL9A3-207ENST00000467819 LYPD6Q86Y78 171 aa16.41■□□□□ 0.22
COL9A3-207ENST00000467819 MYOZ3Q8TDC0 251 aa16.41■□□□□ 0.22
COL9A3-207ENST00000467819 ASCL2Q99929 193 aa16.41■□□□□ 0.22
COL9A3-207ENST00000467819 NABP2Q9BQ15 211 aa16.41■□□□□ 0.22
COL9A3-207ENST00000467819 ZNF251Q9BRH9 671 aa16.41■□□□□ 0.22
COL9A3-207ENST00000467819 PPIFP30405 207 aaKnown RBP16.4■□□□□ 0.22
COL9A3-207ENST00000467819 OR3A3P47888 321 aa16.4■□□□□ 0.22
COL9A3-207ENST00000467819 DHRSXQ8N5I4 330 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms