RNA–Protein interactions for RNA: ENST00000466192.5

COL9A3-205, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 2

Gene COL9A3, Length 2,194 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-205ENST00000466192 GCSAMQ8N6F7 178 aa15.32■□□□□ 0.04
COL9A3-205ENST00000466192 CD177Q8N6Q3 437 aa15.32■□□□□ 0.04
COL9A3-205ENST00000466192 ITLN1Q8WWA0 313 aa15.32■□□□□ 0.04
COL9A3-205ENST00000466192 COQ2Q96H96 371 aa15.32■□□□□ 0.04
COL9A3-205ENST00000466192 TMEM56Q96MV1 263 aa15.32■□□□□ 0.04
COL9A3-205ENST00000466192 TAF9BQ9HBM6 251 aa15.32■□□□□ 0.04
COL9A3-205ENST00000466192 TMEM56-RWDD3S4R434 201 aa15.32■□□□□ 0.04
COL9A3-205ENST00000466192 TMEM30CPA0ZSE6 113 aa15.31■□□□□ 0.04
COL9A3-205ENST00000466192 NKX2-6A6NCS4 301 aa15.31■□□□□ 0.04
COL9A3-205ENST00000466192 CFHR2P36980 270 aa15.31■□□□□ 0.04
COL9A3-205ENST00000466192 SELENOVP59797 346 aa15.31■□□□□ 0.04
COL9A3-205ENST00000466192 SLC35E4Q6ICL7 350 aa15.31■□□□□ 0.04
COL9A3-205ENST00000466192 SELENOHQ8IZQ5 122 aaKnown RBP15.31■□□□□ 0.04
COL9A3-205ENST00000466192 TESK1Q15569 626 aa15.31■□□□□ 0.04
COL9A3-205ENST00000466192 OR10V1Q8NGI7 309 aa15.31■□□□□ 0.04
COL9A3-205ENST00000466192 LILRB1Q8NHL6 650 aaPredicted RBP15.31■□□□□ 0.04
COL9A3-205ENST00000466192 TMED6Q8WW62 240 aa15.31■□□□□ 0.04
COL9A3-205ENST00000466192 DYSFO75923 2080 aa15.3■□□□□ 0.04
COL9A3-205ENST00000466192 NBASA2RRP1 2371 aa15.3■□□□□ 0.04
COL9A3-205ENST00000466192 CDS2O95674 445 aa15.3■□□□□ 0.04
COL9A3-205ENST00000466192 PSG2P11465 335 aa15.3■□□□□ 0.04
COL9A3-205ENST00000466192 RPL7L1Q6DKI1 246 aaKnown RBP15.3■□□□□ 0.04
COL9A3-205ENST00000466192 BOLLQ8N9W6 283 aaKnown RBP15.3■□□□□ 0.04
COL9A3-205ENST00000466192 BVESQ8NE79 360 aa15.3■□□□□ 0.04
COL9A3-205ENST00000466192 OR51H1Q8NH63 302 aa15.3■□□□□ 0.04
COL9A3-205ENST00000466192 WFIKKN1Q96NZ8 548 aa15.3■□□□□ 0.04
COL9A3-205ENST00000466192 BARX1Q9HBU1 254 aaPredicted RBP15.3■□□□□ 0.04
COL9A3-205ENST00000466192 IGKV1D-17A0A075B6S4 117 aa15.29■□□□□ 0.04
COL9A3-205ENST00000466192 E5RGE8 158 aa15.29■□□□□ 0.04
COL9A3-205ENST00000466192 ST8SIA3O43173 380 aa15.29■□□□□ 0.04
COL9A3-205ENST00000466192 IGHV1-46P01743 117 aa15.29■□□□□ 0.04
COL9A3-205ENST00000466192 UCP1P25874 307 aa15.29■□□□□ 0.04
COL9A3-205ENST00000466192 PRDX2P32119 198 aa15.29■□□□□ 0.04
COL9A3-205ENST00000466192 CA7P43166 264 aa15.29■□□□□ 0.04
COL9A3-205ENST00000466192 CLEC9AQ6UXN8 241 aa15.29■□□□□ 0.04
COL9A3-205ENST00000466192 EIF4E3Q8N5X7 224 aaKnown RBP15.29■□□□□ 0.04
COL9A3-205ENST00000466192 PARP12Q9H0J9 701 aaKnown RBP15.29■□□□□ 0.04
COL9A3-205ENST00000466192 NSG2Q9Y328 171 aa15.29■□□□□ 0.04
COL9A3-205ENST00000466192 RBM7Q9Y580 266 aaKnown RBP15.29■□□□□ 0.04
COL9A3-205ENST00000466192 A0A1B0GW55 424 aa15.29■□□□□ 0.04
COL9A3-205ENST00000466192 H0Y980 276 aa15.29■□□□□ 0.04
COL9A3-205ENST00000466192 LGALS8O00214 317 aa15.29■□□□□ 0.04
COL9A3-205ENST00000466192 LHBP01229 141 aa15.29■□□□□ 0.04
COL9A3-205ENST00000466192 FGF2P09038 288 aa15.29■□□□□ 0.04
COL9A3-205ENST00000466192 DUX4L2P0CJ85 424 aa15.29■□□□□ 0.04
COL9A3-205ENST00000466192 DUX4L3P0CJ86 424 aa15.29■□□□□ 0.04
COL9A3-205ENST00000466192 DUX4L4P0CJ87 422 aa15.29■□□□□ 0.04
COL9A3-205ENST00000466192 DUX4L5P0CJ88 424 aa15.29■□□□□ 0.04
COL9A3-205ENST00000466192 DUX4L6P0CJ89 424 aa15.29■□□□□ 0.04
COL9A3-205ENST00000466192 DUX4L7P0CJ90 424 aa15.29■□□□□ 0.04
COL9A3-205ENST00000466192 F2RP25116 425 aa15.29■□□□□ 0.04
COL9A3-205ENST00000466192 S100GP29377 79 aa15.29■□□□□ 0.04
COL9A3-205ENST00000466192 CEACAM6P40199 344 aa15.29■□□□□ 0.04
COL9A3-205ENST00000466192 TMEM33P57088 247 aa15.29■□□□□ 0.04
COL9A3-205ENST00000466192 HSD17B13Q7Z5P4 300 aaPredicted RBP15.29■□□□□ 0.04
COL9A3-205ENST00000466192 LINC00518Q8N0U6 118 aa15.29■□□□□ 0.04
COL9A3-205ENST00000466192 OR4D5Q8NGN0 318 aa15.29■□□□□ 0.04
COL9A3-205ENST00000466192 MARC2Q969Z3 335 aa15.29■□□□□ 0.04
COL9A3-205ENST00000466192 SMIM3Q9BZL3 60 aa15.29■□□□□ 0.04
COL9A3-205ENST00000466192 DUX4Q9UBX2 424 aa15.29■□□□□ 0.04
COL9A3-205ENST00000466192 IGHV3OR15-7A0A075B7D8 119 aa15.28■□□□□ 0.04
COL9A3-205ENST00000466192 C12orf77C9JDV5 145 aa15.28■□□□□ 0.04
COL9A3-205ENST00000466192 TAAR5O14804 337 aa15.28■□□□□ 0.04
COL9A3-205ENST00000466192 IGLV2-14P01704 120 aa15.28■□□□□ 0.04
COL9A3-205ENST00000466192 HEXAP06865 529 aa15.28■□□□□ 0.04
COL9A3-205ENST00000466192 GATA4P43694 442 aa15.28■□□□□ 0.04
COL9A3-205ENST00000466192 CASP6P55212 293 aa15.28■□□□□ 0.04
COL9A3-205ENST00000466192 SSX8Q7RTT4 187 aa15.28■□□□□ 0.04
COL9A3-205ENST00000466192 TPRX1Q8N7U7 411 aa15.28■□□□□ 0.04
COL9A3-205ENST00000466192 PLEKHA2Q9HB19 425 aa15.28■□□□□ 0.04
COL9A3-205ENST00000466192 KCNIP1Q9NZI2 227 aa15.28■□□□□ 0.04
COL9A3-205ENST00000466192 FBXL17Q9UF56 701 aa15.28■□□□□ 0.04
COL9A3-205ENST00000466192 ITPR1Q14643 2758 aa15.28■□□□□ 0.04
COL9A3-205ENST00000466192 RAI1Q7Z5J4 1906 aaPredicted RBP15.28■□□□□ 0.04
COL9A3-205ENST00000466192 ADAM20O43506 726 aa15.28■□□□□ 0.04
COL9A3-205ENST00000466192 ZNF737O75373 536 aa15.28■□□□□ 0.04
COL9A3-205ENST00000466192 GABRA2P47869 451 aa15.28■□□□□ 0.04
COL9A3-205ENST00000466192 GLIPR1P48060 266 aa15.28■□□□□ 0.04
COL9A3-205ENST00000466192 ADIPOQQ15848 244 aa15.28■□□□□ 0.04
COL9A3-205ENST00000466192 KRBOX4Q5JUW0 171 aa15.28■□□□□ 0.04
COL9A3-205ENST00000466192 FAM90A1Q86YD7 464 aa15.28■□□□□ 0.04
COL9A3-205ENST00000466192 ST6GALNAC3Q8NDV1 305 aa15.28■□□□□ 0.04
COL9A3-205ENST00000466192 OR1L1Q8NH94 360 aa15.28■□□□□ 0.04
COL9A3-205ENST00000466192 ERGIC1Q969X5 290 aa15.28■□□□□ 0.04
COL9A3-205ENST00000466192 ZFP57Q9NU63 452 aa15.28■□□□□ 0.04
COL9A3-205ENST00000466192 IL19Q9UHD0 177 aa15.28■□□□□ 0.04
COL9A3-205ENST00000466192 PPP1R3CQ9UQK1 317 aa15.28■□□□□ 0.04
COL9A3-205ENST00000466192 RCL1Q9Y2P8 373 aaKnown RBP15.28■□□□□ 0.04
COL9A3-205ENST00000466192 OR8U9P0C7N5 309 aa15.27■□□□□ 0.04
COL9A3-205ENST00000466192 TNFAIP6P98066 277 aaPredicted RBP15.27■□□□□ 0.04
COL9A3-205ENST00000466192 ADAM5Q6NVV9 412 aa15.27■□□□□ 0.04
COL9A3-205ENST00000466192 OR5D13Q8NGL4 314 aa15.27■□□□□ 0.04
COL9A3-205ENST00000466192 OR8U1Q8NH10 309 aa15.27■□□□□ 0.04
COL9A3-205ENST00000466192 DNTTIP1Q9H147 329 aa15.27■□□□□ 0.04
COL9A3-205ENST00000466192 GCM1Q9NP62 436 aa15.27■□□□□ 0.04
COL9A3-205ENST00000466192 ZDHHC8Q9ULC8 765 aa15.27■□□□□ 0.04
COL9A3-205ENST00000466192 KCNS2Q9ULS6 477 aa15.27■□□□□ 0.04
COL9A3-205ENST00000466192 OOEPA6NGQ2 149 aa15.26■□□□□ 0.03
COL9A3-205ENST00000466192 VDAC1P21796 283 aa15.26■□□□□ 0.03
COL9A3-205ENST00000466192 ID4P47928 161 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 101 ms