RNA–Protein interactions for RNA: ENST00000465877.1

COL5A1-206, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 3

Gene COL5A1, Length 583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-206ENST00000465877 SRSF4Q08170 494 aaKnown RBP10.35□□□□□ -0.75
COL5A1-206ENST00000465877 DIAPH2-AS1Q14236 149 aa10.35□□□□□ -0.75
COL5A1-206ENST00000465877 GNMTQ14749 295 aa10.35□□□□□ -0.75
COL5A1-206ENST00000465877 HMGN3Q15651 99 aa10.35□□□□□ -0.75
COL5A1-206ENST00000465877 ZNF880Q6PDB4 577 aa10.35□□□□□ -0.75
COL5A1-206ENST00000465877 LINC00311Q8N616 119 aa10.35□□□□□ -0.75
COL5A1-206ENST00000465877 C8orf31Q8N9H6 132 aa10.35□□□□□ -0.75
COL5A1-206ENST00000465877 TSPAN14Q8NG11 270 aa10.35□□□□□ -0.75
COL5A1-206ENST00000465877 OR56B4Q8NH76 319 aa10.35□□□□□ -0.75
COL5A1-206ENST00000465877 OR2T6Q8NHC8 308 aa10.35□□□□□ -0.75
COL5A1-206ENST00000465877 SETD6Q8TBK2 473 aa10.35□□□□□ -0.75
COL5A1-206ENST00000465877 KCTD7Q96MP8 289 aa10.35□□□□□ -0.75
COL5A1-206ENST00000465877 HDHD3Q9BSH5 251 aaPredicted RBP10.35□□□□□ -0.75
COL5A1-206ENST00000465877 ZNF696Q9H7X3 374 aa10.35□□□□□ -0.75
COL5A1-206ENST00000465877 ZNF702PQ9H963 129 aa10.35□□□□□ -0.75
COL5A1-206ENST00000465877 C12orf4Q9NQ89 552 aa10.35□□□□□ -0.75
COL5A1-206ENST00000465877 AK3Q9UIJ7 227 aa10.35□□□□□ -0.75
COL5A1-206ENST00000465877 HSF4Q9ULV5 492 aa10.35□□□□□ -0.75
COL5A1-206ENST00000465877 VWFP04275 2813 aa10.34□□□□□ -0.75
COL5A1-206ENST00000465877 NOTOA8MTQ0 251 aa10.34□□□□□ -0.75
COL5A1-206ENST00000465877 SLC2A2P11168 524 aaPredicted RBP10.34□□□□□ -0.75
COL5A1-206ENST00000465877 RAB6AP20340 208 aa10.34□□□□□ -0.75
COL5A1-206ENST00000465877 HLA-DRB3P79483 266 aa10.34□□□□□ -0.75
COL5A1-206ENST00000465877 MXD1Q05195 221 aa10.34□□□□□ -0.75
COL5A1-206ENST00000465877 ZNF816Q0VGE8 651 aaPredicted RBP10.34□□□□□ -0.75
COL5A1-206ENST00000465877 MOGAT2Q3SYC2 334 aa10.34□□□□□ -0.75
COL5A1-206ENST00000465877 SFXN4Q6P4A7 337 aa10.34□□□□□ -0.75
COL5A1-206ENST00000465877 SLC25A48Q6ZT89 311 aaKnown RBP10.34□□□□□ -0.75
COL5A1-206ENST00000465877 C16orf82Q7Z2V1 217 aa10.34□□□□□ -0.75
COL5A1-206ENST00000465877 C5orf24Q7Z6I8 188 aa10.34□□□□□ -0.75
COL5A1-206ENST00000465877 TPRA1Q86W33 373 aa10.34□□□□□ -0.75
COL5A1-206ENST00000465877 OR8H3Q8N146 312 aa10.34□□□□□ -0.75
COL5A1-206ENST00000465877 CFHR4Q92496 578 aa10.34□□□□□ -0.75
COL5A1-206ENST00000465877 OCSTAMPQ9BR26 566 aa10.34□□□□□ -0.75
COL5A1-206ENST00000465877 SLC25A33Q9BSK2 321 aa10.34□□□□□ -0.75
COL5A1-206ENST00000465877 PECRQ9BY49 303 aa10.34□□□□□ -0.75
COL5A1-206ENST00000465877 RNF167Q9H6Y7 350 aa10.34□□□□□ -0.75
COL5A1-206ENST00000465877 OR2S2Q9NQN1 319 aa10.34□□□□□ -0.75
COL5A1-206ENST00000465877 RAB22AQ9UL26 194 aa10.34□□□□□ -0.75
COL5A1-206ENST00000465877 TRBV6-6A0A0A6YYG2 114 aa10.33□□□□□ -0.76
COL5A1-206ENST00000465877 IL3RAP26951 378 aa10.33□□□□□ -0.76
COL5A1-206ENST00000465877 SDC2P34741 201 aa10.33□□□□□ -0.76
COL5A1-206ENST00000465877 PPP1CCP36873 323 aaKnown RBP10.33□□□□□ -0.76
COL5A1-206ENST00000465877 KIR2DS4P43632 304 aa10.33□□□□□ -0.76
COL5A1-206ENST00000465877 REG1BP48304 166 aa10.33□□□□□ -0.76
COL5A1-206ENST00000465877 ZNF137PP52743 207 aa10.33□□□□□ -0.76
COL5A1-206ENST00000465877 KRTAP10-3P60369 221 aa10.33□□□□□ -0.76
COL5A1-206ENST00000465877 HTD2P86397 168 aa10.33□□□□□ -0.76
COL5A1-206ENST00000465877 HABP2Q14520 560 aaPredicted RBP10.33□□□□□ -0.76
COL5A1-206ENST00000465877 TIMM50Q3ZCQ8 353 aa10.33□□□□□ -0.76
COL5A1-206ENST00000465877 PLAC9Q5JTB6 97 aa10.33□□□□□ -0.76
COL5A1-206ENST00000465877 Q6ZTK2 550 aa10.33□□□□□ -0.76
COL5A1-206ENST00000465877 DRAM1Q8N682 238 aa10.33□□□□□ -0.76
COL5A1-206ENST00000465877 LGALS14Q8TCE9 139 aa10.33□□□□□ -0.76
COL5A1-206ENST00000465877 AKR1E2Q96JD6 320 aa10.33□□□□□ -0.76
COL5A1-206ENST00000465877 CITED1Q99966 193 aa10.33□□□□□ -0.76
COL5A1-206ENST00000465877 CENPOQ9BU64 300 aa10.33□□□□□ -0.76
COL5A1-206ENST00000465877 ABHD14AQ9BUJ0 271 aa10.33□□□□□ -0.76
COL5A1-206ENST00000465877 RIMS4Q9H426 269 aaPredicted RBP10.33□□□□□ -0.76
COL5A1-206ENST00000465877 ABRACLQ9P1F3 81 aa10.33□□□□□ -0.76
COL5A1-206ENST00000465877 DAPK2Q9UIK4 370 aa10.33□□□□□ -0.76
COL5A1-206ENST00000465877 SIGLEC9Q9Y336 463 aa10.33□□□□□ -0.76
COL5A1-206ENST00000465877 IGHV1-3A0A0C4DH29 117 aa10.32□□□□□ -0.76
COL5A1-206ENST00000465877 TRIM64CA6NLI5 447 aa10.32□□□□□ -0.76
COL5A1-206ENST00000465877 MFNGO00587 321 aa10.32□□□□□ -0.76
COL5A1-206ENST00000465877 TXNL1O43396 289 aa10.32□□□□□ -0.76
COL5A1-206ENST00000465877 OR2F2O95006 317 aa10.32□□□□□ -0.76
COL5A1-206ENST00000465877 SNRNP70P08621 437 aaKnown RBP10.32□□□□□ -0.76
COL5A1-206ENST00000465877 MORN2Q502X0 79 aa10.32□□□□□ -0.76
COL5A1-206ENST00000465877 C11orf88Q6PI97 169 aa10.32□□□□□ -0.76
COL5A1-206ENST00000465877 Q8N2B8 174 aa10.32□□□□□ -0.76
COL5A1-206ENST00000465877 OR52L2PQ8NGH6 319 aa10.32□□□□□ -0.76
COL5A1-206ENST00000465877 OR10R2Q8NGX6 335 aa10.32□□□□□ -0.76
COL5A1-206ENST00000465877 SGMS2Q8NHU3 365 aa10.32□□□□□ -0.76
COL5A1-206ENST00000465877 CAPSLQ8WWF8 208 aa10.32□□□□□ -0.76
COL5A1-206ENST00000465877 RTN4IP1Q8WWV3 396 aaPredicted RBP10.32□□□□□ -0.76
COL5A1-206ENST00000465877 IL1F10Q8WWZ1 152 aa10.32□□□□□ -0.76
COL5A1-206ENST00000465877 ST6GALNAC6Q969X2 333 aa10.32□□□□□ -0.76
COL5A1-206ENST00000465877 PTX4Q96A99 478 aa10.32□□□□□ -0.76
COL5A1-206ENST00000465877 GALMQ96C23 342 aa10.32□□□□□ -0.76
COL5A1-206ENST00000465877 RAB3CQ96E17 227 aa10.32□□□□□ -0.76
COL5A1-206ENST00000465877 CMSS1Q9BQ75 279 aaKnown RBP10.32□□□□□ -0.76
COL5A1-206ENST00000465877 MOB4Q9Y3A3 225 aa10.32□□□□□ -0.76
COL5A1-206ENST00000465877 A0A075B6Q4 140 aa10.31□□□□□ -0.76
COL5A1-206ENST00000465877 FAM90A9PA6NNJ1 464 aa10.31□□□□□ -0.76
COL5A1-206ENST00000465877 RAB27BO00194 218 aa10.31□□□□□ -0.76
COL5A1-206ENST00000465877 RGS11O94810 467 aa10.31□□□□□ -0.76
COL5A1-206ENST00000465877 IGKV1D-33P01593 117 aa10.31□□□□□ -0.76
COL5A1-206ENST00000465877 IGKV1-33P01594 117 aa10.31□□□□□ -0.76
COL5A1-206ENST00000465877 GAPDHP04406 335 aaKnown RBP10.31□□□□□ -0.76
COL5A1-206ENST00000465877 LPLP06858 475 aa10.31□□□□□ -0.76
COL5A1-206ENST00000465877 CLEC2LP0C7M8 214 aa10.31□□□□□ -0.76
COL5A1-206ENST00000465877 HIST1H1DP16402 221 aaKnown RBP10.31□□□□□ -0.76
COL5A1-206ENST00000465877 ZNF134P52741 427 aa10.31□□□□□ -0.76
COL5A1-206ENST00000465877 HES1Q14469 280 aa10.31□□□□□ -0.76
COL5A1-206ENST00000465877 TMEM95Q3KNT9 176 aa10.31□□□□□ -0.76
COL5A1-206ENST00000465877 CT45A1Q5HYN5 189 aa10.31□□□□□ -0.76
COL5A1-206ENST00000465877 STEAP3Q658P3 488 aa10.31□□□□□ -0.76
COL5A1-206ENST00000465877 IZUMO1Q8IYV9 350 aa10.31□□□□□ -0.76
COL5A1-206ENST00000465877 KLHDC1Q8N7A1 406 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms