RNA–Protein interactions for RNA: ENST00000454428.5

UBE2D4-209, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

TSL 3

Gene UBE2D4, Length 288 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-209ENST00000454428 OR5D14Q8NGL3 314 aa13.07□□□□□ -0.32
UBE2D4-209ENST00000454428 OR1L1Q8NH94 360 aa13.07□□□□□ -0.32
UBE2D4-209ENST00000454428 MS4A10Q96PG2 267 aa13.07□□□□□ -0.32
UBE2D4-209ENST00000454428 ZNF251Q9BRH9 671 aa13.07□□□□□ -0.32
UBE2D4-209ENST00000454428 CST11Q9H112 138 aa13.07□□□□□ -0.32
UBE2D4-209ENST00000454428 CEPT1Q9Y6K0 416 aa13.07□□□□□ -0.32
UBE2D4-209ENST00000454428 A3GALT2U3KPV4 340 aa13.07□□□□□ -0.32
UBE2D4-209ENST00000454428 DNAH2Q9P225 4427 aa13.07□□□□□ -0.32
UBE2D4-209ENST00000454428 ABCA13Q86UQ4 5058 aa13.06□□□□□ -0.32
UBE2D4-209ENST00000454428 IZUMO1RA6ND01 250 aa13.06□□□□□ -0.32
UBE2D4-209ENST00000454428 FCN1O00602 326 aa13.06□□□□□ -0.32
UBE2D4-209ENST00000454428 DCTN3O75935 186 aa13.06□□□□□ -0.32
UBE2D4-209ENST00000454428 CDRT1O95170 752 aa13.06□□□□□ -0.32
UBE2D4-209ENST00000454428 BRI3O95415 125 aa13.06□□□□□ -0.32
UBE2D4-209ENST00000454428 T-ENOLP0DO92 83 aa13.06□□□□□ -0.32
UBE2D4-209ENST00000454428 SNRPBP14678 240 aaKnown RBP13.06□□□□□ -0.32
UBE2D4-209ENST00000454428 POLR2IP36954 125 aaKnown RBP13.06□□□□□ -0.32
UBE2D4-209ENST00000454428 ADARB1P78563 741 aaKnown RBP13.06□□□□□ -0.32
UBE2D4-209ENST00000454428 TMED1Q13445 227 aa13.06□□□□□ -0.32
UBE2D4-209ENST00000454428 ALKBH1Q13686 389 aaKnown RBP13.06□□□□□ -0.32
UBE2D4-209ENST00000454428 STEAP3Q658P3 488 aa13.06□□□□□ -0.32
UBE2D4-209ENST00000454428 ZNF660Q6AZW8 331 aaPredicted RBP13.06□□□□□ -0.32
UBE2D4-209ENST00000454428 CD200R1LQ6Q8B3 271 aa13.06□□□□□ -0.32
UBE2D4-209ENST00000454428 KCTD20Q7Z5Y7 419 aa13.06□□□□□ -0.32
UBE2D4-209ENST00000454428 TCTEX1D1Q8N7M0 179 aa13.06□□□□□ -0.32
UBE2D4-209ENST00000454428 NSL1Q96IY1 281 aa13.06□□□□□ -0.32
UBE2D4-209ENST00000454428 CYYR1Q96J86 154 aa13.06□□□□□ -0.32
UBE2D4-209ENST00000454428 GNG12Q9UBI6 72 aa13.06□□□□□ -0.32
UBE2D4-209ENST00000454428 GAB2Q9UQC2 676 aa13.06□□□□□ -0.32
UBE2D4-209ENST00000454428 PKHD1P08F94 4074 aa13.06□□□□□ -0.32
UBE2D4-209ENST00000454428 DYNC1H1Q14204 4646 aaKnown RBP13.05□□□□□ -0.32
UBE2D4-209ENST00000454428 TCRBV3S1A0A5B6 114 aa13.05□□□□□ -0.32
UBE2D4-209ENST00000454428 AIPO00170 330 aa13.05□□□□□ -0.32
UBE2D4-209ENST00000454428 ARPC1BO15143 372 aaKnown RBP13.05□□□□□ -0.32
UBE2D4-209ENST00000454428 HBZP02008 142 aa13.05□□□□□ -0.32
UBE2D4-209ENST00000454428 KLF5Q13887 457 aaPredicted RBP13.05□□□□□ -0.32
UBE2D4-209ENST00000454428 C5orf24Q7Z6I8 188 aa13.05□□□□□ -0.32
UBE2D4-209ENST00000454428 SATL1Q86VE3 508 aa13.05□□□□□ -0.32
UBE2D4-209ENST00000454428 OR52N1Q8NH53 320 aa13.05□□□□□ -0.32
UBE2D4-209ENST00000454428 DDB2Q92466 427 aa13.05□□□□□ -0.32
UBE2D4-209ENST00000454428 FAM192AQ9GZU8 254 aa13.05□□□□□ -0.32
UBE2D4-209ENST00000454428 CNOT2Q9NZN8 540 aaKnown RBP13.05□□□□□ -0.32
UBE2D4-209ENST00000454428 H0Y980 276 aa13.04□□□□□ -0.32
UBE2D4-209ENST00000454428 SLC25A17O43808 307 aa13.04□□□□□ -0.32
UBE2D4-209ENST00000454428 TPPP2P59282 170 aa13.04□□□□□ -0.32
UBE2D4-209ENST00000454428 GNMTQ14749 295 aa13.04□□□□□ -0.32
UBE2D4-209ENST00000454428 MORN2Q502X0 79 aa13.04□□□□□ -0.32
UBE2D4-209ENST00000454428 SYT6Q5T7P8 510 aaPredicted RBP13.04□□□□□ -0.32
UBE2D4-209ENST00000454428 PYHIN1Q6K0P9 492 aa13.04□□□□□ -0.32
UBE2D4-209ENST00000454428 GTSCR1Q86UQ5 136 aa13.04□□□□□ -0.32
UBE2D4-209ENST00000454428 OR9G4Q8NGQ1 327 aa13.04□□□□□ -0.32
UBE2D4-209ENST00000454428 TMEM106AQ96A25 262 aa13.04□□□□□ -0.32
UBE2D4-209ENST00000454428 GPER1Q99527 375 aa13.04□□□□□ -0.32
UBE2D4-209ENST00000454428 FAM103A1Q9BTL3 118 aaKnown RBP13.04□□□□□ -0.32
UBE2D4-209ENST00000454428 FBXL15Q9H469 300 aa13.04□□□□□ -0.32
UBE2D4-209ENST00000454428 PLEKHA3Q9HB20 300 aa13.04□□□□□ -0.32
UBE2D4-209ENST00000454428 IL36GQ9NZH8 169 aa13.04□□□□□ -0.32
UBE2D4-209ENST00000454428 ERGIC3Q9Y282 383 aa13.04□□□□□ -0.32
UBE2D4-209ENST00000454428 A0A1W2PP11 408 aa13.03□□□□□ -0.32
UBE2D4-209ENST00000454428 J3QLW9 94 aa13.03□□□□□ -0.32
UBE2D4-209ENST00000454428 SPINT2O43291 252 aa13.03□□□□□ -0.32
UBE2D4-209ENST00000454428 ZNF19P17023 458 aa13.03□□□□□ -0.32
UBE2D4-209ENST00000454428 RAB3AP20336 220 aa13.03□□□□□ -0.32
UBE2D4-209ENST00000454428 OR3A3P47888 321 aa13.03□□□□□ -0.32
UBE2D4-209ENST00000454428 TMEM30BQ3MIR4 351 aa13.03□□□□□ -0.32
UBE2D4-209ENST00000454428 AKIRIN2Q53H80 203 aa13.03□□□□□ -0.32
UBE2D4-209ENST00000454428 ACTBL2Q562R1 376 aa13.03□□□□□ -0.32
UBE2D4-209ENST00000454428 ATAD3CQ5T2N8 411 aa13.03□□□□□ -0.32
UBE2D4-209ENST00000454428 ZNF833PQ6ZTB9 187 aa13.03□□□□□ -0.32
UBE2D4-209ENST00000454428 SPATA24Q86W54 205 aa13.03□□□□□ -0.32
UBE2D4-209ENST00000454428 GAPTQ8N292 157 aa13.03□□□□□ -0.32
UBE2D4-209ENST00000454428 PRR18Q8N4B5 295 aa13.03□□□□□ -0.32
UBE2D4-209ENST00000454428 RPP25LQ8N5L8 163 aaKnown RBP13.03□□□□□ -0.32
UBE2D4-209ENST00000454428 OR8J1Q8NGP2 316 aa13.03□□□□□ -0.32
UBE2D4-209ENST00000454428 OR4K15Q8NH41 348 aa13.03□□□□□ -0.32
UBE2D4-209ENST00000454428 C4orf36Q96KX1 117 aa13.03□□□□□ -0.32
UBE2D4-209ENST00000454428 ADAM30Q9UKF2 790 aa13.03□□□□□ -0.32
UBE2D4-209ENST00000454428 DAPL1A0PJW8 107 aa13.02□□□□□ -0.33
UBE2D4-209ENST00000454428 SHISA3A0PJX4 238 aa13.02□□□□□ -0.33
UBE2D4-209ENST00000454428 CSN3P07498 182 aa13.02□□□□□ -0.33
UBE2D4-209ENST00000454428 RCC1P18754 421 aaPredicted RBP13.02□□□□□ -0.33
UBE2D4-209ENST00000454428 FSTP19883 344 aa13.02□□□□□ -0.33
UBE2D4-209ENST00000454428 MECP2P51608 486 aaKnown RBP13.02□□□□□ -0.33
UBE2D4-209ENST00000454428 MPV17LQ2QL34 196 aa13.02□□□□□ -0.33
UBE2D4-209ENST00000454428 HSP90B2PQ58FF3 399 aa13.02□□□□□ -0.33
UBE2D4-209ENST00000454428 UNQ5815/PRO19632Q6UWF5 114 aa13.02□□□□□ -0.33
UBE2D4-209ENST00000454428 LINC00596Q86U02 117 aa13.02□□□□□ -0.33
UBE2D4-209ENST00000454428 PPP1R27Q86WC6 154 aa13.02□□□□□ -0.33
UBE2D4-209ENST00000454428 RFKQ969G6 155 aa13.02□□□□□ -0.33
UBE2D4-209ENST00000454428 CIB1Q99828 191 aa13.02□□□□□ -0.33
UBE2D4-209ENST00000454428 PDCD1LG2Q9BQ51 273 aa13.02□□□□□ -0.33
UBE2D4-209ENST00000454428 THTPAQ9BU02 230 aa13.02□□□□□ -0.33
UBE2D4-209ENST00000454428 ABHD14AQ9BUJ0 271 aa13.02□□□□□ -0.33
UBE2D4-209ENST00000454428 GABARAPL1Q9H0R8 117 aa13.02□□□□□ -0.33
UBE2D4-209ENST00000454428 RIBC2Q9H4K1 309 aa13.02□□□□□ -0.33
UBE2D4-209ENST00000454428 RANGRFQ9HD47 186 aaPredicted RBP13.02□□□□□ -0.33
UBE2D4-209ENST00000454428 MED4Q9NPJ6 270 aa13.02□□□□□ -0.33
UBE2D4-209ENST00000454428 RCC2Q9P258 522 aaKnown RBP13.02□□□□□ -0.33
UBE2D4-209ENST00000454428 ING4Q9UNL4 249 aa13.02□□□□□ -0.33
UBE2D4-209ENST00000454428 DHDHQ9UQ10 334 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms