RNA–Protein interactions for RNA: ENST00000452448.6

EPHA3-202, Transcript of EPH receptor A3, humanhuman

TSL 1 (best) BASIC

Gene EPHA3, Length 2,546 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA3-202ENST00000452448 FEVQ99581 238 aa4.24□□□□□ -1.73
EPHA3-202ENST00000452448 HSD17B10Q99714 261 aaKnown RBP4.24□□□□□ -1.73
EPHA3-202ENST00000452448 LRRC61Q9BV99 259 aa4.24□□□□□ -1.73
EPHA3-202ENST00000452448 GATA5Q9BWX5 397 aaPredicted RBP4.24□□□□□ -1.73
EPHA3-202ENST00000452448 WDR13Q9H1Z4 485 aa4.24□□□□□ -1.73
EPHA3-202ENST00000452448 ASIC5Q9NY37 505 aa4.24□□□□□ -1.73
EPHA3-202ENST00000452448 CLCF1Q9UBD9 225 aa4.24□□□□□ -1.73
EPHA3-202ENST00000452448 POLDIP2Q9Y2S7 368 aa4.24□□□□□ -1.73
EPHA3-202ENST00000452448 COL11A2P13942 1736 aaPredicted RBP4.24□□□□□ -1.73
EPHA3-202ENST00000452448 ZNF106Q9H2Y7 1883 aaKnown RBP4.23□□□□□ -1.73
EPHA3-202ENST00000452448 DOCK3Q8IZD9 2030 aa4.23□□□□□ -1.73
EPHA3-202ENST00000452448 IGHV2-26A0A0B4J1V2 119 aa4.23□□□□□ -1.73
EPHA3-202ENST00000452448 ZNF816-ZNF321PA0A0X1KG74 233 aa4.23□□□□□ -1.73
EPHA3-202ENST00000452448 TMEM8BA6NDV4 472 aa4.23□□□□□ -1.73
EPHA3-202ENST00000452448 OTOL1A6NHN0 477 aaPredicted RBP4.23□□□□□ -1.73
EPHA3-202ENST00000452448 TNFRSF11BO00300 401 aa4.23□□□□□ -1.73
EPHA3-202ENST00000452448 NUDT3O95989 172 aa4.23□□□□□ -1.73
EPHA3-202ENST00000452448 HRASP01112 189 aa4.23□□□□□ -1.73
EPHA3-202ENST00000452448 KRASP01116 189 aa4.23□□□□□ -1.73
EPHA3-202ENST00000452448 ADMP35318 185 aa4.23□□□□□ -1.73
EPHA3-202ENST00000452448 SRP14P37108 136 aaKnown RBP4.23□□□□□ -1.73
EPHA3-202ENST00000452448 MAGEA5P43359 124 aa4.23□□□□□ -1.73
EPHA3-202ENST00000452448 HLA-DRB5Q30154 266 aa4.23□□□□□ -1.73
EPHA3-202ENST00000452448 SPATA45Q537H7 98 aa4.23□□□□□ -1.73
EPHA3-202ENST00000452448 SLC25A47Q6Q0C1 308 aa4.23□□□□□ -1.73
EPHA3-202ENST00000452448 C19orf48Q6RUI8 117 aa4.23□□□□□ -1.73
EPHA3-202ENST00000452448 TMEM184AQ6ZMB5 413 aa4.23□□□□□ -1.73
EPHA3-202ENST00000452448 GDPGP1Q6ZNW5 385 aa4.23□□□□□ -1.73
EPHA3-202ENST00000452448 Q6ZSR6 202 aa4.23□□□□□ -1.73
EPHA3-202ENST00000452448 APRG1Q8IVJ8 170 aa4.23□□□□□ -1.73
EPHA3-202ENST00000452448 DEFB123Q8N688 67 aa4.23□□□□□ -1.73
EPHA3-202ENST00000452448 KIR3DL3Q8N743 410 aa4.23□□□□□ -1.73
EPHA3-202ENST00000452448 ZNRF2Q8NHG8 242 aa4.23□□□□□ -1.73
EPHA3-202ENST00000452448 OVCA2Q8WZ82 227 aa4.23□□□□□ -1.73
EPHA3-202ENST00000452448 OR5P3Q8WZ94 311 aa4.23□□□□□ -1.73
EPHA3-202ENST00000452448 SDF2Q99470 211 aa4.23□□□□□ -1.73
EPHA3-202ENST00000452448 ATP5SQ99766 215 aa4.23□□□□□ -1.73
EPHA3-202ENST00000452448 TMEM204Q9BSN7 226 aa4.23□□□□□ -1.73
EPHA3-202ENST00000452448 NDC1Q9BTX1 674 aa4.23□□□□□ -1.73
EPHA3-202ENST00000452448 AK3Q9UIJ7 227 aa4.23□□□□□ -1.73
EPHA3-202ENST00000452448 BTRCQ9Y297 605 aa4.23□□□□□ -1.73
EPHA3-202ENST00000452448 TRAV24A0A0B4J272 114 aa4.23□□□□□ -1.73
EPHA3-202ENST00000452448 A0A0B4J2A0 478 aa4.23□□□□□ -1.73
EPHA3-202ENST00000452448 MEGF11A6BM72 1044 aa4.23□□□□□ -1.73
EPHA3-202ENST00000452448 CXorf49A8MYA2 514 aaPredicted RBP4.23□□□□□ -1.73
EPHA3-202ENST00000452448 UMAD1C9J7I0 102 aa4.23□□□□□ -1.73
EPHA3-202ENST00000452448 PRSS46E5RG02 174 aa4.23□□□□□ -1.73
EPHA3-202ENST00000452448 TNFSF12O43508 249 aa4.23□□□□□ -1.73
EPHA3-202ENST00000452448 YPEL1O60688 119 aa4.23□□□□□ -1.73
EPHA3-202ENST00000452448 AGFG2O95081 481 aa4.23□□□□□ -1.73
EPHA3-202ENST00000452448 HLA-DQB2P05538 268 aa4.23□□□□□ -1.73
EPHA3-202ENST00000452448 FGF3P11487 239 aaPredicted RBP4.23□□□□□ -1.73
EPHA3-202ENST00000452448 CD99P14209 185 aa4.23□□□□□ -1.73
EPHA3-202ENST00000452448 FABP6P51161 128 aa4.23□□□□□ -1.73
EPHA3-202ENST00000452448 FMODQ06828 376 aa4.23□□□□□ -1.73
EPHA3-202ENST00000452448 MYBPHQ13203 477 aa4.23□□□□□ -1.73
EPHA3-202ENST00000452448 ANXA2RQ3ZCQ2 193 aa4.23□□□□□ -1.73
EPHA3-202ENST00000452448 BHLHA9Q7RTU4 235 aa4.23□□□□□ -1.73
EPHA3-202ENST00000452448 FAM19A1Q7Z5A9 133 aa4.23□□□□□ -1.73
EPHA3-202ENST00000452448 DEFB125Q8N687 156 aa4.23□□□□□ -1.73
EPHA3-202ENST00000452448 YPEL2Q96QA6 119 aa4.23□□□□□ -1.73
EPHA3-202ENST00000452448 GPER1Q99527 375 aa4.23□□□□□ -1.73
EPHA3-202ENST00000452448 SLC25A33Q9BSK2 321 aa4.23□□□□□ -1.73
EPHA3-202ENST00000452448 DPY30Q9C005 99 aa4.23□□□□□ -1.73
EPHA3-202ENST00000452448 WDR61Q9GZS3 305 aaKnown RBP4.23□□□□□ -1.73
EPHA3-202ENST00000452448 EDA2RQ9HAV5 297 aa4.23□□□□□ -1.73
EPHA3-202ENST00000452448 MRPL17Q9NRX2 175 aaKnown RBP4.23□□□□□ -1.73
EPHA3-202ENST00000452448 HRASLS2Q9NWW9 162 aa4.23□□□□□ -1.73
EPHA3-202ENST00000452448 KCNIP1Q9NZI2 227 aa4.23□□□□□ -1.73
EPHA3-202ENST00000452448 GNG12Q9UBI6 72 aa4.23□□□□□ -1.73
EPHA3-202ENST00000452448 SHPKQ9UHJ6 478 aa4.23□□□□□ -1.73
EPHA3-202ENST00000452448 PRNDQ9UKY0 176 aa4.23□□□□□ -1.73
EPHA3-202ENST00000452448 SOX21Q9Y651 276 aaPredicted RBP4.23□□□□□ -1.73
EPHA3-202ENST00000452448 SIP14410 1827 aa4.23□□□□□ -1.73
EPHA3-202ENST00000452448 CCDC88CQ9P219 2028 aa4.22□□□□□ -1.73
EPHA3-202ENST00000452448 A0A087WWC5 75 aa4.22□□□□□ -1.73
EPHA3-202ENST00000452448 BORCS7-ASMTA0A0B4J1R7 106 aa4.22□□□□□ -1.73
EPHA3-202ENST00000452448 ARPC2O15144 300 aa4.22□□□□□ -1.73
EPHA3-202ENST00000452448 PRKNO60260 465 aaPredicted RBP4.22□□□□□ -1.73
EPHA3-202ENST00000452448 GCM2O75603 506 aaPredicted RBP4.22□□□□□ -1.73
EPHA3-202ENST00000452448 OXTP01178 125 aa4.22□□□□□ -1.73
EPHA3-202ENST00000452448 TTRP02766 147 aa4.22□□□□□ -1.73
EPHA3-202ENST00000452448 PRNPP04156 253 aa4.22□□□□□ -1.73
EPHA3-202ENST00000452448 PFN1P07737 140 aaKnown RBP4.22□□□□□ -1.73
EPHA3-202ENST00000452448 FAM106CPP0CH98 169 aa4.22□□□□□ -1.73
EPHA3-202ENST00000452448 ORM2P19652 201 aa4.22□□□□□ -1.73
EPHA3-202ENST00000452448 BLVRBP30043 206 aaPredicted RBP4.22□□□□□ -1.73
EPHA3-202ENST00000452448 CTRLP40313 264 aa4.22□□□□□ -1.73
EPHA3-202ENST00000452448 CXCL12P48061 93 aa4.22□□□□□ -1.73
EPHA3-202ENST00000452448 GZMMP51124 257 aa4.22□□□□□ -1.73
EPHA3-202ENST00000452448 MTCP1P56278 107 aa4.22□□□□□ -1.73
EPHA3-202ENST00000452448 SLC35B1P78383 322 aa4.22□□□□□ -1.73
EPHA3-202ENST00000452448 ZNF345Q14585 488 aa4.22□□□□□ -1.73
EPHA3-202ENST00000452448 RTP5Q14D33 572 aa4.22□□□□□ -1.73
EPHA3-202ENST00000452448 KIAA0040Q15053 153 aa4.22□□□□□ -1.73
EPHA3-202ENST00000452448 FAM106AQ4KMX7 169 aa4.22□□□□□ -1.73
EPHA3-202ENST00000452448 DMRTC1Q5HYR2 192 aa4.22□□□□□ -1.73
EPHA3-202ENST00000452448 MEIG1Q5JSS6 88 aa4.22□□□□□ -1.73
EPHA3-202ENST00000452448 FAM90A2PQ658T7 463 aa4.22□□□□□ -1.73
EPHA3-202ENST00000452448 OR2T5Q6IEZ7 315 aa4.22□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms