RNA–Protein interactions for RNA: ENST00000447267.4

SDCBP-205, Transcript of syndecan binding protein, humanhuman

TSL 3 BASIC

Gene SDCBP, Length 772 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-205ENST00000447267 SNX12Q9UMY4 172 aa3.54□□□□□ -1.84
SDCBP-205ENST00000447267 BAIAP2Q9UQB8 552 aa3.54□□□□□ -1.84
SDCBP-205ENST00000447267 TIMM10BQ9Y5J6 103 aa3.54□□□□□ -1.84
SDCBP-205ENST00000447267 SELENOKQ9Y6D0 94 aa3.54□□□□□ -1.84
SDCBP-205ENST00000447267 A0A087X0M5 115 aa3.53□□□□□ -1.84
SDCBP-205ENST00000447267 A0A1B0GWA3 101 aa3.53□□□□□ -1.84
SDCBP-205ENST00000447267 A0A1B0GX30 115 aa3.53□□□□□ -1.84
SDCBP-205ENST00000447267 METTL21EPA6NDL7 271 aa3.53□□□□□ -1.84
SDCBP-205ENST00000447267 OR6C6A6NF89 314 aa3.53□□□□□ -1.84
SDCBP-205ENST00000447267 C11orf94C9JXX5 98 aa3.53□□□□□ -1.84
SDCBP-205ENST00000447267 G3V2T6 193 aa3.53□□□□□ -1.84
SDCBP-205ENST00000447267 H7C2Y5 167 aa3.53□□□□□ -1.84
SDCBP-205ENST00000447267 HMGN4O00479 90 aa3.53□□□□□ -1.84
SDCBP-205ENST00000447267 UBE2CO00762 179 aa3.53□□□□□ -1.84
SDCBP-205ENST00000447267 GYG2O15488 501 aa3.53□□□□□ -1.84
SDCBP-205ENST00000447267 ARPC5O15511 151 aa3.53□□□□□ -1.84
SDCBP-205ENST00000447267 PTTG1O95997 202 aa3.53□□□□□ -1.84
SDCBP-205ENST00000447267 IGHV3-11P01762 117 aa3.53□□□□□ -1.84
SDCBP-205ENST00000447267 CD74P04233 296 aa3.53□□□□□ -1.84
SDCBP-205ENST00000447267 DBIP07108 87 aaKnown RBP3.53□□□□□ -1.84
SDCBP-205ENST00000447267 CRYGCP07315 174 aa3.53□□□□□ -1.84
SDCBP-205ENST00000447267 P0C879 139 aa3.53□□□□□ -1.84
SDCBP-205ENST00000447267 PIPP12273 146 aaPredicted RBP3.53□□□□□ -1.84
SDCBP-205ENST00000447267 SPI1P17947 270 aa3.53□□□□□ -1.84
SDCBP-205ENST00000447267 HLA-DMBP28068 263 aa3.53□□□□□ -1.84
SDCBP-205ENST00000447267 HTR2AP28223 471 aa3.53□□□□□ -1.84
SDCBP-205ENST00000447267 GCAP28676 217 aa3.53□□□□□ -1.84
SDCBP-205ENST00000447267 CD40LGP29965 261 aa3.53□□□□□ -1.84
SDCBP-205ENST00000447267 CHI3L1P36222 383 aaPredicted RBP3.53□□□□□ -1.84
SDCBP-205ENST00000447267 OPRL1P41146 370 aa3.53□□□□□ -1.84
SDCBP-205ENST00000447267 GABRA2P47869 451 aa3.53□□□□□ -1.84
SDCBP-205ENST00000447267 NPBWR2P48146 333 aa3.53□□□□□ -1.84
SDCBP-205ENST00000447267 RFX2P48378 723 aa3.53□□□□□ -1.84
SDCBP-205ENST00000447267 ARL4CP56559 192 aa3.53□□□□□ -1.84
SDCBP-205ENST00000447267 NUTF2P61970 127 aaKnown RBP3.53□□□□□ -1.84
SDCBP-205ENST00000447267 RBX1P62877 108 aa3.53□□□□□ -1.84
SDCBP-205ENST00000447267 RPL31P62899 125 aaKnown RBP3.53□□□□□ -1.84
SDCBP-205ENST00000447267 IFITM3Q01628 133 aa3.53□□□□□ -1.84
SDCBP-205ENST00000447267 GPR176Q14439 515 aa3.53□□□□□ -1.84
SDCBP-205ENST00000447267 GUCA2BQ16661 112 aa3.53□□□□□ -1.84
SDCBP-205ENST00000447267 RNF212Q495C1 297 aa3.53□□□□□ -1.84
SDCBP-205ENST00000447267 RFTN2Q52LD8 501 aaPredicted RBP3.53□□□□□ -1.84
SDCBP-205ENST00000447267 MINOS1Q5TGZ0 78 aa3.53□□□□□ -1.84
SDCBP-205ENST00000447267 SLC25A47Q6Q0C1 308 aa3.53□□□□□ -1.84
SDCBP-205ENST00000447267 ZCCHC23Q6ZST2 131 aa3.53□□□□□ -1.84
SDCBP-205ENST00000447267 CYS1Q717R9 158 aa3.53□□□□□ -1.84
SDCBP-205ENST00000447267 SELENOHQ8IZQ5 122 aaKnown RBP3.53□□□□□ -1.84
SDCBP-205ENST00000447267 CLECL1Q8IZS7 167 aa3.53□□□□□ -1.84
SDCBP-205ENST00000447267 Q8N402 240 aa3.53□□□□□ -1.84
SDCBP-205ENST00000447267 ARRDC1Q8N5I2 433 aa3.53□□□□□ -1.84
SDCBP-205ENST00000447267 IQCF1Q8N6M8 205 aa3.53□□□□□ -1.84
SDCBP-205ENST00000447267 PRR26Q8N8Z3 221 aa3.53□□□□□ -1.84
SDCBP-205ENST00000447267 OR1M1Q8NGA1 313 aa3.53□□□□□ -1.84
SDCBP-205ENST00000447267 OR10A7Q8NGE5 316 aa3.53□□□□□ -1.84
SDCBP-205ENST00000447267 OR13C2Q8NGS9 318 aa3.53□□□□□ -1.84
SDCBP-205ENST00000447267 OR2T11Q8NH01 316 aa3.53□□□□□ -1.84
SDCBP-205ENST00000447267 OR2T27Q8NH04 317 aa3.53□□□□□ -1.84
SDCBP-205ENST00000447267 OR5J2Q8NH18 312 aa3.53□□□□□ -1.84
SDCBP-205ENST00000447267 TMEM163Q8TC26 289 aa3.53□□□□□ -1.84
SDCBP-205ENST00000447267 CASTOR1Q8WTX7 329 aa3.53□□□□□ -1.84
SDCBP-205ENST00000447267 MS4A14Q96JA4 679 aa3.53□□□□□ -1.84
SDCBP-205ENST00000447267 ST6GAL2Q96JF0 529 aa3.53□□□□□ -1.84
SDCBP-205ENST00000447267 ABHD14AQ9BUJ0 271 aa3.53□□□□□ -1.84
SDCBP-205ENST00000447267 DNTTIP1Q9H147 329 aa3.53□□□□□ -1.84
SDCBP-205ENST00000447267 TXNIPQ9H3M7 391 aa3.53□□□□□ -1.84
SDCBP-205ENST00000447267 PLEKHA1Q9HB21 404 aa3.53□□□□□ -1.84
SDCBP-205ENST00000447267 IL1RAPQ9NPH3 570 aa3.53□□□□□ -1.84
SDCBP-205ENST00000447267 C1orf109Q9NX04 203 aa3.53□□□□□ -1.84
SDCBP-205ENST00000447267 HAO2Q9NYQ3 351 aa3.53□□□□□ -1.84
SDCBP-205ENST00000447267 USE1Q9NZ43 259 aa3.53□□□□□ -1.84
SDCBP-205ENST00000447267 NDUFAF4Q9P032 175 aa3.53□□□□□ -1.84
SDCBP-205ENST00000447267 VAPAQ9P0L0 249 aa3.53□□□□□ -1.84
SDCBP-205ENST00000447267 COPZ2Q9P299 210 aa3.53□□□□□ -1.84
SDCBP-205ENST00000447267 SLC13A4Q9UKG4 626 aa3.53□□□□□ -1.84
SDCBP-205ENST00000447267 ZNF443Q9Y2A4 671 aaPredicted RBP3.53□□□□□ -1.84
SDCBP-205ENST00000447267 GOLT1BQ9Y3E0 138 aa3.53□□□□□ -1.84
SDCBP-205ENST00000447267 MINOS1-NBL1R4GNA1 71 aa3.53□□□□□ -1.84
SDCBP-205ENST00000447267 TRAV10A0A0B4J240 114 aa3.52□□□□□ -1.85
SDCBP-205ENST00000447267 hCG_1809904A0A1W2PP81 198 aa3.52□□□□□ -1.85
SDCBP-205ENST00000447267 A0A1W2PPE2 198 aa3.52□□□□□ -1.85
SDCBP-205ENST00000447267 A0A1W2PPQ1 181 aa3.52□□□□□ -1.85
SDCBP-205ENST00000447267 A0A1W2PR64 198 aa3.52□□□□□ -1.85
SDCBP-205ENST00000447267 A0A1W2PRV1 198 aa3.52□□□□□ -1.85
SDCBP-205ENST00000447267 CCDC182A6NF36 153 aa3.52□□□□□ -1.85
SDCBP-205ENST00000447267 C17orf98A8MV24 154 aa3.52□□□□□ -1.85
SDCBP-205ENST00000447267 DNASE2O00115 360 aaPredicted RBP3.52□□□□□ -1.85
SDCBP-205ENST00000447267 SLC28A1O00337 649 aa3.52□□□□□ -1.85
SDCBP-205ENST00000447267 PRKYO43930 277 aa3.52□□□□□ -1.85
SDCBP-205ENST00000447267 RLN2P04090 185 aa3.52□□□□□ -1.85
SDCBP-205ENST00000447267 LCATP04180 440 aa3.52□□□□□ -1.85
SDCBP-205ENST00000447267 CSN3P07498 182 aa3.52□□□□□ -1.85
SDCBP-205ENST00000447267 CTXN2P0C2S0 81 aa3.52□□□□□ -1.85
SDCBP-205ENST00000447267 ACSM4P0C7M7 580 aa3.52□□□□□ -1.85
SDCBP-205ENST00000447267 HTR1DP28221 377 aa3.52□□□□□ -1.85
SDCBP-205ENST00000447267 HSD11B1P28845 292 aa3.52□□□□□ -1.85
SDCBP-205ENST00000447267 CD34P28906 385 aa3.52□□□□□ -1.85
SDCBP-205ENST00000447267 ERP29P30040 261 aaKnown RBP3.52□□□□□ -1.85
SDCBP-205ENST00000447267 BDKRB2P30411 391 aa3.52□□□□□ -1.85
SDCBP-205ENST00000447267 FCGR2BP31994 310 aaPredicted RBP3.52□□□□□ -1.85
SDCBP-205ENST00000447267 MAGEA12P43365 314 aa3.52□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 80.6 ms