RNA–Protein interactions for RNA: ENST00000445265.6

TCOF1-206, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 4,825 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-206ENST00000445265 SLC25A40Q8TBP6 338 aa14.35□□□□□ -0.11
TCOF1-206ENST00000445265 RTTNQ86VV8 2226 aa14.35□□□□□ -0.11
TCOF1-206ENST00000445265 ST8SIA5O15466 376 aa14.35□□□□□ -0.11
TCOF1-206ENST00000445265 FGF16O43320 207 aa14.35□□□□□ -0.11
TCOF1-206ENST00000445265 SP1P08047 785 aa14.35□□□□□ -0.11
TCOF1-206ENST00000445265 ERVFC1-1P60608 527 aa14.35□□□□□ -0.11
TCOF1-206ENST00000445265 BTNL3Q6UXE8 466 aa14.35□□□□□ -0.11
TCOF1-206ENST00000445265 GINS3Q9BRX5 216 aa14.35□□□□□ -0.11
TCOF1-206ENST00000445265 PKIBQ9C010 78 aa14.35□□□□□ -0.11
TCOF1-206ENST00000445265 CTSSP25774 331 aa14.35□□□□□ -0.11
TCOF1-206ENST00000445265 TPPP2P59282 170 aa14.35□□□□□ -0.11
TCOF1-206ENST00000445265 SPINK9Q5DT21 86 aa14.35□□□□□ -0.11
TCOF1-206ENST00000445265 TXN2Q99757 166 aa14.35□□□□□ -0.11
TCOF1-206ENST00000445265 MEX3AA1L020 520 aaKnown RBP14.34□□□□□ -0.11
TCOF1-206ENST00000445265 C11orf94C9JXX5 98 aa14.34□□□□□ -0.11
TCOF1-206ENST00000445265 PTBP3O95758 552 aaKnown RBP14.34□□□□□ -0.11
TCOF1-206ENST00000445265 OR5G3P0C626 314 aa14.34□□□□□ -0.11
TCOF1-206ENST00000445265 S100A7P31151 101 aa14.34□□□□□ -0.11
TCOF1-206ENST00000445265 ALKBH6Q3KRA9 238 aa14.34□□□□□ -0.11
TCOF1-206ENST00000445265 OR4S2Q8NH73 311 aa14.34□□□□□ -0.11
TCOF1-206ENST00000445265 HIST1H2BAQ96A08 127 aa14.34□□□□□ -0.11
TCOF1-206ENST00000445265 CHRDL1Q9BU40 450 aa14.34□□□□□ -0.11
TCOF1-206ENST00000445265 FZR1Q9UM11 496 aa14.34□□□□□ -0.11
TCOF1-206ENST00000445265 SLC45A2Q9UMX9 530 aa14.34□□□□□ -0.11
TCOF1-206ENST00000445265 IGKV1-9A0A0C4DH69 117 aa14.34□□□□□ -0.11
TCOF1-206ENST00000445265 C17orf82Q86X59 251 aaPredicted RBP14.34□□□□□ -0.11
TCOF1-206ENST00000445265 MRPL30Q8TCC3 161 aaKnown RBP14.34□□□□□ -0.11
TCOF1-206ENST00000445265 SH3BGRL3Q9H299 93 aa14.34□□□□□ -0.11
TCOF1-206ENST00000445265 SLC35D1Q9NTN3 355 aa14.34□□□□□ -0.11
TCOF1-206ENST00000445265 SYNGR3O43761 229 aa14.34□□□□□ -0.11
TCOF1-206ENST00000445265 LYG1Q8N1E2 194 aa14.34□□□□□ -0.11
TCOF1-206ENST00000445265 ADTRPQ96IZ2 230 aa14.34□□□□□ -0.11
TCOF1-206ENST00000445265 OR2J1Q9GZK6 312 aa14.34□□□□□ -0.11
TCOF1-206ENST00000445265 SYNGR1O43759 233 aa14.34□□□□□ -0.11
TCOF1-206ENST00000445265 NPBWR2P48146 333 aa14.34□□□□□ -0.11
TCOF1-206ENST00000445265 ERVS71-1P61550 626 aa14.34□□□□□ -0.11
TCOF1-206ENST00000445265 TMEM251Q8N6I4 163 aa14.34□□□□□ -0.11
TCOF1-206ENST00000445265 TMEM230Q96A57 120 aa14.34□□□□□ -0.11
TCOF1-206ENST00000445265 GMPPAQ96IJ6 420 aaPredicted RBP14.34□□□□□ -0.11
TCOF1-206ENST00000445265 KLHDC3Q9BQ90 382 aa14.34□□□□□ -0.11
TCOF1-206ENST00000445265 hCG_38984A0A1B0GV85 526 aa14.33□□□□□ -0.11
TCOF1-206ENST00000445265 H0YIZ8 118 aa14.33□□□□□ -0.11
TCOF1-206ENST00000445265 ADH4P08319 380 aa14.33□□□□□ -0.11
TCOF1-206ENST00000445265 TNFRSF1AP19438 455 aa14.33□□□□□ -0.11
TCOF1-206ENST00000445265 RAB4AP20338 218 aa14.33□□□□□ -0.11
TCOF1-206ENST00000445265 G6PCP35575 357 aa14.33□□□□□ -0.11
TCOF1-206ENST00000445265 OR1K1Q8NGR3 316 aa14.33□□□□□ -0.11
TCOF1-206ENST00000445265 SNX22Q96L94 193 aa14.33□□□□□ -0.11
TCOF1-206ENST00000445265 USB1Q9BQ65 265 aaKnown RBP14.33□□□□□ -0.11
TCOF1-206ENST00000445265 REG4Q9BYZ8 158 aa14.33□□□□□ -0.11
TCOF1-206ENST00000445265 IL36GQ9NZH8 169 aa14.33□□□□□ -0.11
TCOF1-206ENST00000445265 PITPNC1Q9UKF7 332 aa14.33□□□□□ -0.11
TCOF1-206ENST00000445265 FHITP49789 147 aa14.33□□□□□ -0.12
TCOF1-206ENST00000445265 ZNF83P51522 516 aa14.33□□□□□ -0.12
TCOF1-206ENST00000445265 CD81P60033 236 aa14.33□□□□□ -0.12
TCOF1-206ENST00000445265 RND3P61587 244 aa14.33□□□□□ -0.12
TCOF1-206ENST00000445265 TLE1Q04724 770 aa14.33□□□□□ -0.12
TCOF1-206ENST00000445265 HES3Q5TGS1 186 aa14.33□□□□□ -0.12
TCOF1-206ENST00000445265 GPR146Q96CH1 333 aa14.33□□□□□ -0.12
TCOF1-206ENST00000445265 TP53RKQ96S44 253 aa14.33□□□□□ -0.12
TCOF1-206ENST00000445265 RSG1Q9BU20 258 aa14.33□□□□□ -0.12
TCOF1-206ENST00000445265 PQLC2LA1A4F0 135 aa14.33□□□□□ -0.12
TCOF1-206ENST00000445265 ZIC3O60481 467 aa14.33□□□□□ -0.12
TCOF1-206ENST00000445265 FAM78BQ5VT40 261 aa14.33□□□□□ -0.12
TCOF1-206ENST00000445265 DLL3Q9NYJ7 618 aa14.33□□□□□ -0.12
TCOF1-206ENST00000445265 SH2D2AQ9NP31 389 aa14.32□□□□□ -0.12
TCOF1-206ENST00000445265 CYB5R3P00387 301 aaPredicted RBP14.32□□□□□ -0.12
TCOF1-206ENST00000445265 OR10J4P0C629 311 aa14.32□□□□□ -0.12
TCOF1-206ENST00000445265 PACRGQ96M98 296 aaPredicted RBP14.32□□□□□ -0.12
TCOF1-206ENST00000445265 TRIOBPQ9H2D6 2365 aa14.32□□□□□ -0.12
TCOF1-206ENST00000445265 CXorf65A6NEN9 183 aa14.32□□□□□ -0.12
TCOF1-206ENST00000445265 MRPL14Q6P1L8 145 aaKnown RBP14.32□□□□□ -0.12
TCOF1-206ENST00000445265 ZNF818PQ6ZRF7 136 aa14.32□□□□□ -0.12
TCOF1-206ENST00000445265 ZNF319Q9P2F9 582 aa14.32□□□□□ -0.12
TCOF1-206ENST00000445265 OR5H1A6NKK0 313 aa14.32□□□□□ -0.12
TCOF1-206ENST00000445265 K7EQM0 130 aa14.32□□□□□ -0.12
TCOF1-206ENST00000445265 CFPP27918 469 aa14.32□□□□□ -0.12
TCOF1-206ENST00000445265 CNN1P51911 297 aaKnown RBP14.32□□□□□ -0.12
TCOF1-206ENST00000445265 SOX8P57073 446 aa14.32□□□□□ -0.12
TCOF1-206ENST00000445265 KLF3P57682 345 aaPredicted RBP14.32□□□□□ -0.12
TCOF1-206ENST00000445265 TCTEX1D1Q8N7M0 179 aa14.32□□□□□ -0.12
TCOF1-206ENST00000445265 LRFN3Q9BTN0 628 aa14.32□□□□□ -0.12
TCOF1-206ENST00000445265 COX7A2P2O60397 106 aa14.31□□□□□ -0.12
TCOF1-206ENST00000445265 GLRX5Q86SX6 157 aa14.31□□□□□ -0.12
TCOF1-206ENST00000445265 PLSCR2Q9NRY7 297 aa14.31□□□□□ -0.12
TCOF1-206ENST00000445265 ZDBF2Q9HCK1 2354 aa14.31□□□□□ -0.12
TCOF1-206ENST00000445265 TPRP12270 2363 aaKnown RBP14.31□□□□□ -0.12
TCOF1-206ENST00000445265 FAM90A26D6RGX4 464 aa14.31□□□□□ -0.12
TCOF1-206ENST00000445265 PAGE4O60829 102 aa14.31□□□□□ -0.12
TCOF1-206ENST00000445265 PMS2P11Q13670 270 aa14.31□□□□□ -0.12
TCOF1-206ENST00000445265 IMMP1LQ96LU5 166 aa14.31□□□□□ -0.12
TCOF1-206ENST00000445265 FKBP11Q9NYL4 201 aa14.31□□□□□ -0.12
TCOF1-206ENST00000445265 AUP1Q9Y679 476 aa14.31□□□□□ -0.12
TCOF1-206ENST00000445265 PDE6DO43924 150 aa14.31□□□□□ -0.12
TCOF1-206ENST00000445265 RANP62826 216 aaKnown RBP14.31□□□□□ -0.12
TCOF1-206ENST00000445265 BIVMQ86UB2 503 aa14.31□□□□□ -0.12
TCOF1-206ENST00000445265 WFDC8Q8IUA0 241 aa14.31□□□□□ -0.12
TCOF1-206ENST00000445265 OR8G5Q8NG78 346 aa14.31□□□□□ -0.12
TCOF1-206ENST00000445265 OR5B3Q8NH48 314 aa14.31□□□□□ -0.12
TCOF1-206ENST00000445265 P2RX4Q99571 388 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 149.2 ms