RNA–Protein interactions for RNA: ENST00000429746.1

CTSD-203, Transcript of cathepsin D, humanhuman

TSL 3

Gene CTSD, Length 690 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-203ENST00000429746 WNK1Q9H4A3 2382 aa13.95□□□□□ -0.18
CTSD-203ENST00000429746 LOC100506127A0A0U1RQW1 187 aa13.95□□□□□ -0.18
CTSD-203ENST00000429746 CD24P25063 80 aa13.95□□□□□ -0.18
CTSD-203ENST00000429746 ZNF137PP52743 207 aa13.95□□□□□ -0.18
CTSD-203ENST00000429746 PRRX1P54821 245 aa13.95□□□□□ -0.18
CTSD-203ENST00000429746 SRSF4Q08170 494 aaKnown RBP13.95□□□□□ -0.18
CTSD-203ENST00000429746 HABP2Q14520 560 aaPredicted RBP13.95□□□□□ -0.18
CTSD-203ENST00000429746 DHRS7BQ6IAN0 325 aaPredicted RBP13.95□□□□□ -0.18
CTSD-203ENST00000429746 LIAT1Q6ZQX7 453 aa13.95□□□□□ -0.18
CTSD-203ENST00000429746 Q6ZS46 218 aa13.95□□□□□ -0.18
CTSD-203ENST00000429746 SLC25A48Q6ZT89 311 aaKnown RBP13.95□□□□□ -0.18
CTSD-203ENST00000429746 PLEKHJ1Q9NW61 149 aa13.95□□□□□ -0.18
CTSD-203ENST00000429746 CLPSL1A2RUU4 121 aa13.94□□□□□ -0.18
CTSD-203ENST00000429746 BTBD17A6NE02 478 aa13.94□□□□□ -0.18
CTSD-203ENST00000429746 OOSP1A8MZH6 123 aa13.94□□□□□ -0.18
CTSD-203ENST00000429746 TOR1AO14656 332 aa13.94□□□□□ -0.18
CTSD-203ENST00000429746 SNRPBP14678 240 aaKnown RBP13.94□□□□□ -0.18
CTSD-203ENST00000429746 HTD2P86397 168 aa13.94□□□□□ -0.18
CTSD-203ENST00000429746 MORN2Q502X0 79 aa13.94□□□□□ -0.18
CTSD-203ENST00000429746 TRAT1Q6PIZ9 186 aa13.94□□□□□ -0.18
CTSD-203ENST00000429746 Q6ZTK2 550 aa13.94□□□□□ -0.18
CTSD-203ENST00000429746 ODF3L1Q8IXM7 274 aa13.94□□□□□ -0.18
CTSD-203ENST00000429746 Q8N2B8 174 aa13.94□□□□□ -0.18
CTSD-203ENST00000429746 OR52L2PQ8NGH6 319 aa13.94□□□□□ -0.18
CTSD-203ENST00000429746 OR56B1Q8NGI3 324 aa13.94□□□□□ -0.18
CTSD-203ENST00000429746 OR10V1Q8NGI7 309 aa13.94□□□□□ -0.18
CTSD-203ENST00000429746 OR13F1Q8NGS4 319 aa13.94□□□□□ -0.18
CTSD-203ENST00000429746 OCSTAMPQ9BR26 566 aa13.94□□□□□ -0.18
CTSD-203ENST00000429746 ZNF702PQ9H963 129 aa13.94□□□□□ -0.18
CTSD-203ENST00000429746 ELF5Q9UKW6 265 aaPredicted RBP13.94□□□□□ -0.18
CTSD-203ENST00000429746 SIGLEC9Q9Y336 463 aa13.94□□□□□ -0.18
CTSD-203ENST00000429746 IGKV1-6A0A0C4DH72 117 aa13.93□□□□□ -0.18
CTSD-203ENST00000429746 SPINT2O43291 252 aa13.93□□□□□ -0.18
CTSD-203ENST00000429746 AMY1AP04745 511 aa13.93□□□□□ -0.18
CTSD-203ENST00000429746 AMY2AP04746 511 aa13.93□□□□□ -0.18
CTSD-203ENST00000429746 MXD1Q05195 221 aa13.93□□□□□ -0.18
CTSD-203ENST00000429746 ZNF816Q0VGE8 651 aaPredicted RBP13.93□□□□□ -0.18
CTSD-203ENST00000429746 TMEM30BQ3MIR4 351 aa13.93□□□□□ -0.18
CTSD-203ENST00000429746 LY6G6FQ5SQ64 297 aa13.93□□□□□ -0.18
CTSD-203ENST00000429746 PRR18Q8N4B5 295 aa13.93□□□□□ -0.18
CTSD-203ENST00000429746 OR5H6Q8NGV6 325 aa13.93□□□□□ -0.18
CTSD-203ENST00000429746 OR10R2Q8NGX6 335 aa13.93□□□□□ -0.18
CTSD-203ENST00000429746 LGALS14Q8TCE9 139 aa13.93□□□□□ -0.18
CTSD-203ENST00000429746 CREB3L1Q96BA8 519 aa13.93□□□□□ -0.18
CTSD-203ENST00000429746 SLC25A38Q96DW6 304 aa13.93□□□□□ -0.18
CTSD-203ENST00000429746 RBMXL1Q96E39 390 aaKnown RBP13.93□□□□□ -0.18
CTSD-203ENST00000429746 PARP12Q9H0J9 701 aaKnown RBP13.93□□□□□ -0.18
CTSD-203ENST00000429746 Q9N2K0 584 aa13.93□□□□□ -0.18
CTSD-203ENST00000429746 DAPK2Q9UIK4 370 aa13.93□□□□□ -0.18
CTSD-203ENST00000429746 TIMM23O14925 209 aa13.92□□□□□ -0.18
CTSD-203ENST00000429746 HIST1H1DP16402 221 aaKnown RBP13.92□□□□□ -0.18
CTSD-203ENST00000429746 PPP1CCP36873 323 aaKnown RBP13.92□□□□□ -0.18
CTSD-203ENST00000429746 KIR2DS4P43632 304 aa13.92□□□□□ -0.18
CTSD-203ENST00000429746 MADCAM1Q13477 382 aa13.92□□□□□ -0.18
CTSD-203ENST00000429746 HERPUD1Q15011 391 aa13.92□□□□□ -0.18
CTSD-203ENST00000429746 WIPF2Q8TF74 440 aaPredicted RBP13.92□□□□□ -0.18
CTSD-203ENST00000429746 RANBP3Q9H6Z4 567 aaPredicted RBP13.92□□□□□ -0.18
CTSD-203ENST00000429746 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP13.92□□□□□ -0.18
CTSD-203ENST00000429746 JPT1Q9UK76 154 aa13.92□□□□□ -0.18
CTSD-203ENST00000429746 HSD17B6O14756 317 aa13.91□□□□□ -0.18
CTSD-203ENST00000429746 AIREO43918 545 aa13.91□□□□□ -0.18
CTSD-203ENST00000429746 GNB3P16520 340 aa13.91□□□□□ -0.18
CTSD-203ENST00000429746 RPS19P39019 145 aaKnown RBP13.91□□□□□ -0.18
CTSD-203ENST00000429746 CEACAM3P40198 252 aa13.91□□□□□ -0.18
CTSD-203ENST00000429746 BLCAPP62952 87 aa13.91□□□□□ -0.18
CTSD-203ENST00000429746 MOB1BQ7L9L4 216 aa13.91□□□□□ -0.18
CTSD-203ENST00000429746 TOMM40LQ969M1 308 aa13.91□□□□□ -0.18
CTSD-203ENST00000429746 RAB3CQ96E17 227 aa13.91□□□□□ -0.18
CTSD-203ENST00000429746 CITED1Q99966 193 aa13.91□□□□□ -0.18
CTSD-203ENST00000429746 FUNDC2Q9BWH2 189 aa13.91□□□□□ -0.18
CTSD-203ENST00000429746 NAA50Q9GZZ1 169 aaKnown RBP13.91□□□□□ -0.18
CTSD-203ENST00000429746 RIMS4Q9H426 269 aaPredicted RBP13.91□□□□□ -0.18
CTSD-203ENST00000429746 C12orf4Q9NQ89 552 aa13.91□□□□□ -0.18
CTSD-203ENST00000429746 OR2S2Q9NQN1 319 aa13.91□□□□□ -0.18
CTSD-203ENST00000429746 ABCB10Q9NRK6 738 aa13.91□□□□□ -0.18
CTSD-203ENST00000429746 SERTAD4Q9NUC0 356 aa13.91□□□□□ -0.18
CTSD-203ENST00000429746 AMMECR1Q9Y4X0 333 aaPredicted RBP13.91□□□□□ -0.18
CTSD-203ENST00000429746 RNF114Q9Y508 228 aa13.91□□□□□ -0.18
CTSD-203ENST00000429746 IGHV1-3A0A0C4DH29 117 aa13.9□□□□□ -0.18
CTSD-203ENST00000429746 YPEL1O60688 119 aa13.9□□□□□ -0.18
CTSD-203ENST00000429746 TFAP2AP05549 437 aa13.9□□□□□ -0.18
CTSD-203ENST00000429746 SCTP09683 121 aa13.9□□□□□ -0.18
CTSD-203ENST00000429746 ALDH3B2P48448 385 aa13.9□□□□□ -0.18
CTSD-203ENST00000429746 HLA-DRB3P79483 266 aa13.9□□□□□ -0.18
CTSD-203ENST00000429746 EBI3Q14213 229 aa13.9□□□□□ -0.18
CTSD-203ENST00000429746 STEAP3Q658P3 488 aa13.9□□□□□ -0.18
CTSD-203ENST00000429746 THNSL2Q86YJ6 484 aa13.9□□□□□ -0.18
CTSD-203ENST00000429746 DRAM1Q8N682 238 aa13.9□□□□□ -0.18
CTSD-203ENST00000429746 OR56B4Q8NH76 319 aa13.9□□□□□ -0.18
CTSD-203ENST00000429746 RTN4IP1Q8WWV3 396 aaPredicted RBP13.9□□□□□ -0.18
CTSD-203ENST00000429746 RPEQ96AT9 228 aa13.9□□□□□ -0.18
CTSD-203ENST00000429746 YPEL2Q96QA6 119 aa13.9□□□□□ -0.18
CTSD-203ENST00000429746 ZNF251Q9BRH9 671 aa13.9□□□□□ -0.18
CTSD-203ENST00000429746 IFI27L2Q9H2X8 130 aa13.9□□□□□ -0.18
CTSD-203ENST00000429746 GNG12Q9UBI6 72 aa13.9□□□□□ -0.18
CTSD-203ENST00000429746 IGKV1D-8A0A087WSZ0 117 aa13.89□□□□□ -0.19
CTSD-203ENST00000429746 FCGR3AP08637 254 aa13.89□□□□□ -0.19
CTSD-203ENST00000429746 RANBP1P43487 201 aa13.89□□□□□ -0.19
CTSD-203ENST00000429746 REG1BP48304 166 aa13.89□□□□□ -0.19
CTSD-203ENST00000429746 RAB7AP51149 207 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms