RNA–Protein interactions for RNA: ENST00000423214.1

COL18A1-205, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 5

Gene COL18A1, Length 839 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-205ENST00000423214 Q499Y3 187 aa12.67□□□□□ -0.38
COL18A1-205ENST00000423214 YIF1BQ5BJH7 314 aa12.67□□□□□ -0.38
COL18A1-205ENST00000423214 TRAT1Q6PIZ9 186 aa12.67□□□□□ -0.38
COL18A1-205ENST00000423214 SLC25A48Q6ZT89 311 aaKnown RBP12.67□□□□□ -0.38
COL18A1-205ENST00000423214 NANOGP1Q8N7R0 232 aa12.67□□□□□ -0.38
COL18A1-205ENST00000423214 OR10V1Q8NGI7 309 aa12.67□□□□□ -0.38
COL18A1-205ENST00000423214 C4orf3Q8WVX3 66 aa12.67□□□□□ -0.38
COL18A1-205ENST00000423214 ST6GALNAC6Q969X2 333 aa12.67□□□□□ -0.38
COL18A1-205ENST00000423214 OR14A2Q96R54 314 aa12.67□□□□□ -0.38
COL18A1-205ENST00000423214 SEC14L6B5MCN3 397 aa12.66□□□□□ -0.38
COL18A1-205ENST00000423214 C12orf77C9JDV5 145 aa12.66□□□□□ -0.38
COL18A1-205ENST00000423214 MT-ND4P03905 459 aa12.66□□□□□ -0.38
COL18A1-205ENST00000423214 NHLRC4P0CG21 123 aaPredicted RBP12.66□□□□□ -0.38
COL18A1-205ENST00000423214 OR5H8P0DN80 308 aa12.66□□□□□ -0.38
COL18A1-205ENST00000423214 CDX1P47902 265 aaPredicted RBP12.66□□□□□ -0.38
COL18A1-205ENST00000423214 WNT4P56705 351 aa12.66□□□□□ -0.38
COL18A1-205ENST00000423214 KIR2DS1Q14954 304 aa12.66□□□□□ -0.38
COL18A1-205ENST00000423214 SYT6Q5T7P8 510 aaPredicted RBP12.66□□□□□ -0.38
COL18A1-205ENST00000423214 FAM53AQ6NSI3 398 aaPredicted RBP12.66□□□□□ -0.38
COL18A1-205ENST00000423214 JAGN1Q8N5M9 183 aa12.66□□□□□ -0.38
COL18A1-205ENST00000423214 FAM71E2Q8N5Q1 922 aa12.66□□□□□ -0.38
COL18A1-205ENST00000423214 OR4K15Q8NH41 348 aa12.66□□□□□ -0.38
COL18A1-205ENST00000423214 PRR25Q96S07 402 aa12.66□□□□□ -0.38
COL18A1-205ENST00000423214 HSPB9Q9BQS6 159 aa12.66□□□□□ -0.38
COL18A1-205ENST00000423214 FKBP14Q9NWM8 211 aa12.66□□□□□ -0.38
COL18A1-205ENST00000423214 MRPS28Q9Y2Q9 187 aaKnown RBP12.66□□□□□ -0.38
COL18A1-205ENST00000423214 ZNF736B4DX44 427 aaPredicted RBP12.65□□□□□ -0.38
COL18A1-205ENST00000423214 IGHG4P01861 327 aa12.65□□□□□ -0.38
COL18A1-205ENST00000423214 HBZP02008 142 aa12.65□□□□□ -0.38
COL18A1-205ENST00000423214 MAS1P04201 325 aa12.65□□□□□ -0.38
COL18A1-205ENST00000423214 SLC2A2P11168 524 aaPredicted RBP12.65□□□□□ -0.38
COL18A1-205ENST00000423214 FSTP19883 344 aa12.65□□□□□ -0.38
COL18A1-205ENST00000423214 MYF6P23409 242 aa12.65□□□□□ -0.38
COL18A1-205ENST00000423214 ECI1P42126 302 aa12.65□□□□□ -0.38
COL18A1-205ENST00000423214 ZNF137PP52743 207 aa12.65□□□□□ -0.38
COL18A1-205ENST00000423214 TAS2R43P59537 309 aa12.65□□□□□ -0.38
COL18A1-205ENST00000423214 MMDQ15546 238 aa12.65□□□□□ -0.38
COL18A1-205ENST00000423214 C6orf141Q5SZD1 244 aa12.65□□□□□ -0.38
COL18A1-205ENST00000423214 AWAT2Q6E213 333 aa12.65□□□□□ -0.38
COL18A1-205ENST00000423214 RAB12Q6IQ22 244 aa12.65□□□□□ -0.38
COL18A1-205ENST00000423214 RNF152Q8N8N0 203 aa12.65□□□□□ -0.38
COL18A1-205ENST00000423214 MUL1Q969V5 352 aa12.65□□□□□ -0.38
COL18A1-205ENST00000423214 PLSCR3Q9NRY6 295 aa12.65□□□□□ -0.38
COL18A1-205ENST00000423214 RCC2Q9P258 522 aaKnown RBP12.65□□□□□ -0.38
COL18A1-205ENST00000423214 ZNF107Q9UII5 783 aaPredicted RBP12.65□□□□□ -0.38
COL18A1-205ENST00000423214 ERGIC3Q9Y282 383 aa12.65□□□□□ -0.38
COL18A1-205ENST00000423214 TRBV5-7A0A0A0MS05 114 aa12.64□□□□□ -0.39
COL18A1-205ENST00000423214 GPX5O75715 221 aa12.64□□□□□ -0.39
COL18A1-205ENST00000423214 CDK1P06493 297 aa12.64□□□□□ -0.39
COL18A1-205ENST00000423214 LSAMPQ13449 338 aa12.64□□□□□ -0.39
COL18A1-205ENST00000423214 GLIPR1L1Q6UWM5 242 aa12.64□□□□□ -0.39
COL18A1-205ENST00000423214 ZNF439Q8NDP4 499 aa12.64□□□□□ -0.39
COL18A1-205ENST00000423214 MRPS24Q96EL2 167 aaKnown RBP12.64□□□□□ -0.39
COL18A1-205ENST00000423214 PEX16Q9Y5Y5 336 aa12.64□□□□□ -0.39
COL18A1-205ENST00000423214 U3KQK5 164 aa12.64□□□□□ -0.39
COL18A1-205ENST00000423214 PSMB8P28062 276 aa12.63□□□□□ -0.39
COL18A1-205ENST00000423214 F2RL1P55085 397 aa12.63□□□□□ -0.39
COL18A1-205ENST00000423214 CFHR3Q02985 330 aa12.63□□□□□ -0.39
COL18A1-205ENST00000423214 INSL4Q14641 139 aa12.63□□□□□ -0.39
COL18A1-205ENST00000423214 CT45A1Q5HYN5 189 aa12.63□□□□□ -0.39
COL18A1-205ENST00000423214 TMEM65Q6PI78 240 aa12.63□□□□□ -0.39
COL18A1-205ENST00000423214 OR1L1Q8NH94 360 aa12.63□□□□□ -0.39
COL18A1-205ENST00000423214 CT45A3Q8NHU0 189 aa12.63□□□□□ -0.39
COL18A1-205ENST00000423214 KCTD7Q96MP8 289 aa12.63□□□□□ -0.39
COL18A1-205ENST00000423214 DERL3Q96Q80 235 aa12.63□□□□□ -0.39
COL18A1-205ENST00000423214 ABHD14AQ9BUJ0 271 aa12.63□□□□□ -0.39
COL18A1-205ENST00000423214 SCN3BQ9NY72 215 aa12.63□□□□□ -0.39
COL18A1-205ENST00000423214 KCNIP1Q9NZI2 227 aa12.63□□□□□ -0.39
COL18A1-205ENST00000423214 FAM90A10PA6NDY2 464 aa12.62□□□□□ -0.39
COL18A1-205ENST00000423214 FAM90A7PA6NKC0 464 aa12.62□□□□□ -0.39
COL18A1-205ENST00000423214 FAM90A23PA8MXZ1 464 aa12.62□□□□□ -0.39
COL18A1-205ENST00000423214 LANCL1O43813 399 aa12.62□□□□□ -0.39
COL18A1-205ENST00000423214 CA11O75493 328 aa12.62□□□□□ -0.39
COL18A1-205ENST00000423214 CRTAPO75718 401 aaPredicted RBP12.62□□□□□ -0.39
COL18A1-205ENST00000423214 LY86O95711 162 aa12.62□□□□□ -0.39
COL18A1-205ENST00000423214 IGF1P05019 195 aa12.62□□□□□ -0.39
COL18A1-205ENST00000423214 OR8U8P0C7N1 319 aa12.62□□□□□ -0.39
COL18A1-205ENST00000423214 MGMTP16455 207 aa12.62□□□□□ -0.39
COL18A1-205ENST00000423214 GABPB1Q06547 395 aaPredicted RBP12.62□□□□□ -0.39
COL18A1-205ENST00000423214 FHL3Q13643 280 aa12.62□□□□□ -0.39
COL18A1-205ENST00000423214 ZNF260Q3ZCT1 412 aa12.62□□□□□ -0.39
COL18A1-205ENST00000423214 OR11H1Q8NG94 326 aa12.62□□□□□ -0.39
COL18A1-205ENST00000423214 SELENOIQ9C0D9 397 aa12.62□□□□□ -0.39
COL18A1-205ENST00000423214 BANF2Q9H503 90 aa12.62□□□□□ -0.39
COL18A1-205ENST00000423214 PARP11Q9NR21 331 aa12.62□□□□□ -0.39
COL18A1-205ENST00000423214 ZNF580Q9UK33 172 aa12.62□□□□□ -0.39
COL18A1-205ENST00000423214 RYR3Q15413 4870 aa12.61□□□□□ -0.39
COL18A1-205ENST00000423214 STAB2Q8WWQ8 2551 aa12.61□□□□□ -0.39
COL18A1-205ENST00000423214 UBE2QL1A1L167 161 aa12.61□□□□□ -0.39
COL18A1-205ENST00000423214 CD1AP06126 327 aa12.61□□□□□ -0.39
COL18A1-205ENST00000423214 RCC1P18754 421 aaPredicted RBP12.61□□□□□ -0.39
COL18A1-205ENST00000423214 ZNF134P52741 427 aa12.61□□□□□ -0.39
COL18A1-205ENST00000423214 GNMTQ14749 295 aa12.61□□□□□ -0.39
COL18A1-205ENST00000423214 MED22Q15528 200 aa12.61□□□□□ -0.39
COL18A1-205ENST00000423214 RBMXL1Q96E39 390 aaKnown RBP12.61□□□□□ -0.39
COL18A1-205ENST00000423214 ZNF251Q9BRH9 671 aa12.61□□□□□ -0.39
COL18A1-205ENST00000423214 CHCHD6Q9BRQ6 235 aa12.61□□□□□ -0.39
COL18A1-205ENST00000423214 TMED9Q9BVK6 235 aa12.61□□□□□ -0.39
COL18A1-205ENST00000423214 MND1Q9BWT6 205 aa12.61□□□□□ -0.39
COL18A1-205ENST00000423214 TAF9BQ9HBM6 251 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 79.6 ms