RNA–Protein interactions for RNA: ENST00000422489.1

NUP50-206, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 543 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-206ENST00000422489 SETD6Q8TBK2 473 aa7.35□□□□□ -1.23
NUP50-206ENST00000422489 RTN4IP1Q8WWV3 396 aaPredicted RBP7.35□□□□□ -1.23
NUP50-206ENST00000422489 ST6GALNAC6Q969X2 333 aa7.35□□□□□ -1.23
NUP50-206ENST00000422489 Q96M66 194 aa7.35□□□□□ -1.23
NUP50-206ENST00000422489 CCDC90BQ9GZT6 254 aa7.35□□□□□ -1.23
NUP50-206ENST00000422489 CHMP1AQ9HD42 196 aaPredicted RBP7.35□□□□□ -1.23
NUP50-206ENST00000422489 GHRLQ9UBU3 117 aa7.35□□□□□ -1.23
NUP50-206ENST00000422489 TPRKBQ9Y3C4 175 aa7.35□□□□□ -1.23
NUP50-206ENST00000422489 PDCD6O75340 191 aa7.34□□□□□ -1.23
NUP50-206ENST00000422489 CA11O75493 328 aa7.34□□□□□ -1.23
NUP50-206ENST00000422489 IGHG2P01859 326 aa7.34□□□□□ -1.23
NUP50-206ENST00000422489 UBBP0CG47 229 aa7.34□□□□□ -1.23
NUP50-206ENST00000422489 PPP1CCP36873 323 aaKnown RBP7.34□□□□□ -1.23
NUP50-206ENST00000422489 GPR12P47775 334 aa7.34□□□□□ -1.23
NUP50-206ENST00000422489 AQP4P55087 323 aa7.34□□□□□ -1.23
NUP50-206ENST00000422489 SLC35A2P78381 396 aa7.34□□□□□ -1.23
NUP50-206ENST00000422489 MORN2Q502X0 79 aa7.34□□□□□ -1.23
NUP50-206ENST00000422489 C1orf100Q5SVJ3 147 aa7.34□□□□□ -1.23
NUP50-206ENST00000422489 LIPKQ5VXJ0 399 aa7.34□□□□□ -1.23
NUP50-206ENST00000422489 RNLSQ5VYX0 342 aa7.34□□□□□ -1.23
NUP50-206ENST00000422489 SIGIRRQ6IA17 410 aa7.34□□□□□ -1.23
NUP50-206ENST00000422489 SLC25A48Q6ZT89 311 aaKnown RBP7.34□□□□□ -1.23
NUP50-206ENST00000422489 C18orf65Q6ZTR6 163 aa7.34□□□□□ -1.23
NUP50-206ENST00000422489 LRRTM1Q86UE6 522 aa7.34□□□□□ -1.23
NUP50-206ENST00000422489 MRPL30Q8TCC3 161 aaKnown RBP7.34□□□□□ -1.23
NUP50-206ENST00000422489 UFD1Q92890 307 aa7.34□□□□□ -1.23
NUP50-206ENST00000422489 ZFP57Q9NU63 452 aa7.34□□□□□ -1.23
NUP50-206ENST00000422489 AURKAIP1Q9NWT8 199 aaPredicted RBP7.34□□□□□ -1.23
NUP50-206ENST00000422489 AP4M1O00189 453 aa7.33□□□□□ -1.24
NUP50-206ENST00000422489 RGS10O43665 173 aa7.33□□□□□ -1.24
NUP50-206ENST00000422489 VSIG8P0DPA2 414 aa7.33□□□□□ -1.24
NUP50-206ENST00000422489 HTR2CP28335 458 aa7.33□□□□□ -1.24
NUP50-206ENST00000422489 BLVRBP30043 206 aaPredicted RBP7.33□□□□□ -1.24
NUP50-206ENST00000422489 F2RL1P55085 397 aa7.33□□□□□ -1.24
NUP50-206ENST00000422489 RAB25P57735 213 aa7.33□□□□□ -1.24
NUP50-206ENST00000422489 RPL23AP62750 156 aaKnown RBP7.33□□□□□ -1.24
NUP50-206ENST00000422489 RPS27AP62979 156 aaKnown RBP7.33□□□□□ -1.24
NUP50-206ENST00000422489 GNMTQ14749 295 aa7.33□□□□□ -1.24
NUP50-206ENST00000422489 P2RY14Q15391 338 aa7.33□□□□□ -1.24
NUP50-206ENST00000422489 PNLIPRP3Q17RR3 467 aa7.33□□□□□ -1.24
NUP50-206ENST00000422489 TMEM30BQ3MIR4 351 aa7.33□□□□□ -1.24
NUP50-206ENST00000422489 Q3ZCU0 254 aa7.33□□□□□ -1.24
NUP50-206ENST00000422489 TEX38Q6PEX7 206 aa7.33□□□□□ -1.24
NUP50-206ENST00000422489 C8orf86Q6ZUL3 223 aa7.33□□□□□ -1.24
NUP50-206ENST00000422489 OR2W3Q7Z3T1 314 aa7.33□□□□□ -1.24
NUP50-206ENST00000422489 C6orf201Q7Z4U5 140 aa7.33□□□□□ -1.24
NUP50-206ENST00000422489 IZUMO1Q8IYV9 350 aa7.33□□□□□ -1.24
NUP50-206ENST00000422489 GAPTQ8N292 157 aa7.33□□□□□ -1.24
NUP50-206ENST00000422489 STPG2Q8N412 459 aa7.33□□□□□ -1.24
NUP50-206ENST00000422489 Q8N6K4 173 aa7.33□□□□□ -1.24
NUP50-206ENST00000422489 Q8N9W7 124 aa7.33□□□□□ -1.24
NUP50-206ENST00000422489 ZNF439Q8NDP4 499 aa7.33□□□□□ -1.24
NUP50-206ENST00000422489 KLHL30-AS1Q8NEE0 82 aa7.33□□□□□ -1.24
NUP50-206ENST00000422489 OR51D1Q8NGF3 324 aa7.33□□□□□ -1.24
NUP50-206ENST00000422489 KCNG3Q8TAE7 436 aa7.33□□□□□ -1.24
NUP50-206ENST00000422489 NRG4Q8WWG1 115 aa7.33□□□□□ -1.24
NUP50-206ENST00000422489 IL1F10Q8WWZ1 152 aa7.33□□□□□ -1.24
NUP50-206ENST00000422489 PHYHIPQ92561 330 aa7.33□□□□□ -1.24
NUP50-206ENST00000422489 GALMQ96C23 342 aa7.33□□□□□ -1.24
NUP50-206ENST00000422489 RCC1LQ96I51 464 aaKnown RBP7.33□□□□□ -1.24
NUP50-206ENST00000422489 S1PR3Q99500 378 aa7.33□□□□□ -1.24
NUP50-206ENST00000422489 SULT4A1Q9BR01 284 aa7.33□□□□□ -1.24
NUP50-206ENST00000422489 TMEM59Q9BXS4 323 aa7.33□□□□□ -1.24
NUP50-206ENST00000422489 ABCG5Q9H222 651 aa7.33□□□□□ -1.24
NUP50-206ENST00000422489 KCNK15Q9H427 330 aa7.33□□□□□ -1.24
NUP50-206ENST00000422489 PLGRKTQ9HBL7 147 aa7.33□□□□□ -1.24
NUP50-206ENST00000422489 LIN7CQ9NUP9 197 aaKnown RBP7.33□□□□□ -1.24
NUP50-206ENST00000422489 ABRACLQ9P1F3 81 aa7.33□□□□□ -1.24
NUP50-206ENST00000422489 AK6Q9Y3D8 172 aaKnown RBP7.33□□□□□ -1.24
NUP50-206ENST00000422489 LRRC42Q9Y546 428 aa7.33□□□□□ -1.24
NUP50-206ENST00000422489 NOTCH1P46531 2555 aa7.33□□□□□ -1.24
NUP50-206ENST00000422489 TXNL1O43396 289 aa7.32□□□□□ -1.24
NUP50-206ENST00000422489 LANCL1O43813 399 aa7.32□□□□□ -1.24
NUP50-206ENST00000422489 YPEL1O60688 119 aa7.32□□□□□ -1.24
NUP50-206ENST00000422489 SC5DO75845 299 aa7.32□□□□□ -1.24
NUP50-206ENST00000422489 RGS11O94810 467 aa7.32□□□□□ -1.24
NUP50-206ENST00000422489 CHATP28329 748 aa7.32□□□□□ -1.24
NUP50-206ENST00000422489 HOXD3P31249 432 aaPredicted RBP7.32□□□□□ -1.24
NUP50-206ENST00000422489 SOX6P35712 828 aa7.32□□□□□ -1.24
NUP50-206ENST00000422489 MYCNOSP40205 109 aa7.32□□□□□ -1.24
NUP50-206ENST00000422489 HTD2P86397 168 aa7.32□□□□□ -1.24
NUP50-206ENST00000422489 STEAP3Q658P3 488 aa7.32□□□□□ -1.24
NUP50-206ENST00000422489 LCNL1Q6ZST4 164 aa7.32□□□□□ -1.24
NUP50-206ENST00000422489 ZNF695Q8IW36 515 aa7.32□□□□□ -1.24
NUP50-206ENST00000422489 MRPL41Q8IXM3 137 aaKnown RBP7.32□□□□□ -1.24
NUP50-206ENST00000422489 COMMD1Q8N668 190 aa7.32□□□□□ -1.24
NUP50-206ENST00000422489 OR8H1Q8NGG4 311 aa7.32□□□□□ -1.24
NUP50-206ENST00000422489 DUX3Q96PT4 197 aa7.32□□□□□ -1.24
NUP50-206ENST00000422489 YPEL2Q96QA6 119 aa7.32□□□□□ -1.24
NUP50-206ENST00000422489 NICN1Q9BSH3 213 aa7.32□□□□□ -1.24
NUP50-206ENST00000422489 ABHD14AQ9BUJ0 271 aa7.32□□□□□ -1.24
NUP50-206ENST00000422489 GON7Q9BXV9 100 aa7.32□□□□□ -1.24
NUP50-206ENST00000422489 PLSCR3Q9NRY6 295 aa7.32□□□□□ -1.24
NUP50-206ENST00000422489 MBNL3Q9NUK0 354 aaKnown RBP7.32□□□□□ -1.24
NUP50-206ENST00000422489 PLEKHJ1Q9NW61 149 aa7.32□□□□□ -1.24
NUP50-206ENST00000422489 STEAP1Q9UHE8 339 aa7.32□□□□□ -1.24
NUP50-206ENST00000422489 LSM2Q9Y333 95 aaKnown RBP7.32□□□□□ -1.24
NUP50-206ENST00000422489 SLC22A1O15245 554 aa7.31□□□□□ -1.24
NUP50-206ENST00000422489 SOCS1O15524 211 aa7.31□□□□□ -1.24
NUP50-206ENST00000422489 RRP9O43818 475 aaKnown RBP7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms