RNA–Protein interactions for RNA: ENST00000418882.2

HMGB1P49-201, Transcript of high mobility group box 1 pseudogene 49, humanhuman

BASIC

Gene HMGB1P49, Length 569 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P49-201ENST00000418882 KCNK2O95069 426 aa1.88□□□□□ -2.11
HMGB1P49-201ENST00000418882 ATP5G1P05496 136 aa1.88□□□□□ -2.11
HMGB1P49-201ENST00000418882 OR4Q2P0C623 313 aa1.88□□□□□ -2.11
HMGB1P49-201ENST00000418882 MIPP30301 263 aa1.88□□□□□ -2.11
HMGB1P49-201ENST00000418882 IDH3GP51553 393 aaPredicted RBP1.88□□□□□ -2.11
HMGB1P49-201ENST00000418882 POLR2GP62487 172 aaKnown RBP eCLIP1.88□□□□□ -2.11
HMGB1P49-201ENST00000418882 MRPS25P82663 173 aaKnown RBP1.88□□□□□ -2.11
HMGB1P49-201ENST00000418882 HPCAP84074 193 aa1.88□□□□□ -2.11
HMGB1P49-201ENST00000418882 DR1Q01658 176 aa1.88□□□□□ -2.11
HMGB1P49-201ENST00000418882 C1DQ13901 141 aaKnown RBP1.88□□□□□ -2.11
HMGB1P49-201ENST00000418882 IHHQ14623 411 aa1.88□□□□□ -2.11
HMGB1P49-201ENST00000418882 SSX1Q16384 188 aa1.88□□□□□ -2.11
HMGB1P49-201ENST00000418882 CLEC12BQ2HXU8 276 aa1.88□□□□□ -2.11
HMGB1P49-201ENST00000418882 CENPWQ5EE01 88 aa1.88□□□□□ -2.11
HMGB1P49-201ENST00000418882 ELP2Q6IA86 826 aa1.88□□□□□ -2.11
HMGB1P49-201ENST00000418882 MTERF4Q7Z6M4 381 aaKnown RBP1.88□□□□□ -2.11
HMGB1P49-201ENST00000418882 LINC00596Q86U02 117 aa1.88□□□□□ -2.11
HMGB1P49-201ENST00000418882 GID4Q8IVV7 300 aa1.88□□□□□ -2.11
HMGB1P49-201ENST00000418882 SLC25A45Q8N413 288 aa1.88□□□□□ -2.11
HMGB1P49-201ENST00000418882 YIPF7Q8N8F6 280 aa1.88□□□□□ -2.11
HMGB1P49-201ENST00000418882 SLC25A29Q8N8R3 303 aa1.88□□□□□ -2.11
HMGB1P49-201ENST00000418882 CCDC112Q8NEF3 446 aa1.88□□□□□ -2.11
HMGB1P49-201ENST00000418882 OR2M3Q8NG83 312 aa1.88□□□□□ -2.11
HMGB1P49-201ENST00000418882 ASB17Q8WXJ9 295 aa1.88□□□□□ -2.11
HMGB1P49-201ENST00000418882 TAMM41Q96BW9 452 aa1.88□□□□□ -2.11
HMGB1P49-201ENST00000418882 OR2A7Q96R45 310 aa1.88□□□□□ -2.11
HMGB1P49-201ENST00000418882 SHANK2-AS3Q9BTD1 123 aa1.88□□□□□ -2.11
HMGB1P49-201ENST00000418882 CTNNBIP1Q9NSA3 81 aaPredicted RBP1.88□□□□□ -2.11
HMGB1P49-201ENST00000418882 SVILO95425 2214 aa1.88□□□□□ -2.11
HMGB1P49-201ENST00000418882 WRNQ14191 1432 aaPredicted RBP eCLIP1.88□□□□□ -2.11
HMGB1P49-201ENST00000418882 C2orf16Q68DN1 1984 aa1.88□□□□□ -2.11
HMGB1P49-201ENST00000418882 RB1CC1Q8TDY2 1594 aa1.88□□□□□ -2.11
HMGB1P49-201ENST00000418882 MYO16Q9Y6X6 1858 aa1.88□□□□□ -2.11
HMGB1P49-201ENST00000418882 ADGRL1O94910 1474 aa1.88□□□□□ -2.11
HMGB1P49-201ENST00000418882 SNAPC4Q5SXM2 1469 aa1.88□□□□□ -2.11
HMGB1P49-201ENST00000418882 FLT4P35916 1363 aa1.87□□□□□ -2.11
HMGB1P49-201ENST00000418882 IGHV3-49A0A0A0MS15 119 aa1.87□□□□□ -2.11
HMGB1P49-201ENST00000418882 IGKV2-24A0A0C4DH68 120 aa1.87□□□□□ -2.11
HMGB1P49-201ENST00000418882 A0A0G2JMP0 313 aa1.87□□□□□ -2.11
HMGB1P49-201ENST00000418882 A0A0X1KG70 313 aa1.87□□□□□ -2.11
HMGB1P49-201ENST00000418882 TMEM250H0YL14 139 aa1.87□□□□□ -2.11
HMGB1P49-201ENST00000418882 SETD1AO15047 1707 aaKnown RBP1.87□□□□□ -2.11
HMGB1P49-201ENST00000418882 NPHP4O75161 1426 aaPredicted RBP1.87□□□□□ -2.11
HMGB1P49-201ENST00000418882 DCTN3O75935 186 aa1.87□□□□□ -2.11
HMGB1P49-201ENST00000418882 CYB5R3P00387 301 aaPredicted RBP1.87□□□□□ -2.11
HMGB1P49-201ENST00000418882 SERPINA1P01009 418 aa1.87□□□□□ -2.11
HMGB1P49-201ENST00000418882 LHBP01229 141 aa1.87□□□□□ -2.11
HMGB1P49-201ENST00000418882 SEC11BP0C7V7 166 aa1.87□□□□□ -2.11
HMGB1P49-201ENST00000418882 ESDP10768 282 aa1.87□□□□□ -2.11
HMGB1P49-201ENST00000418882 AKR1C4P17516 323 aa1.87□□□□□ -2.11
HMGB1P49-201ENST00000418882 LGALS3P17931 250 aaKnown RBP1.87□□□□□ -2.11
HMGB1P49-201ENST00000418882 ATF1P18846 271 aa1.87□□□□□ -2.11
HMGB1P49-201ENST00000418882 RCVRNP35243 200 aa1.87□□□□□ -2.11
HMGB1P49-201ENST00000418882 MP68P56378 58 aa1.87□□□□□ -2.11
HMGB1P49-201ENST00000418882 PPP1CAP62136 330 aa1.87□□□□□ -2.11
HMGB1P49-201ENST00000418882 ARF6P62330 175 aa1.87□□□□□ -2.11
HMGB1P49-201ENST00000418882 CASP8Q14790 479 aa1.87□□□□□ -2.11
HMGB1P49-201ENST00000418882 RSU1Q15404 277 aa1.87□□□□□ -2.11
HMGB1P49-201ENST00000418882 NXNL2Q5VZ03 156 aa1.87□□□□□ -2.11
HMGB1P49-201ENST00000418882 TMEM215Q68D42 235 aa1.87□□□□□ -2.11
HMGB1P49-201ENST00000418882 OR10K2Q6IF99 312 aa1.87□□□□□ -2.11
HMGB1P49-201ENST00000418882 ALKAL1Q6UXT8 129 aa1.87□□□□□ -2.11
HMGB1P49-201ENST00000418882 SPNS3Q6ZMD2 512 aa1.87□□□□□ -2.11
HMGB1P49-201ENST00000418882 C16orf47Q6ZP98 133 aaPredicted RBP1.87□□□□□ -2.11
HMGB1P49-201ENST00000418882 Q6ZRU5 148 aa1.87□□□□□ -2.11
HMGB1P49-201ENST00000418882 RASSF6Q6ZTQ3 369 aa1.87□□□□□ -2.11
HMGB1P49-201ENST00000418882 NAA40Q86UY6 237 aa1.87□□□□□ -2.11
HMGB1P49-201ENST00000418882 STX12Q86Y82 276 aa1.87□□□□□ -2.11
HMGB1P49-201ENST00000418882 ITPRIPQ8IWB1 547 aa1.87□□□□□ -2.11
HMGB1P49-201ENST00000418882 STK40Q8N2I9 435 aa1.87□□□□□ -2.11
HMGB1P49-201ENST00000418882 OR51D1Q8NGF3 324 aa1.87□□□□□ -2.11
HMGB1P49-201ENST00000418882 DTD1Q8TEA8 209 aa1.87□□□□□ -2.11
HMGB1P49-201ENST00000418882 C16orf78Q8WTQ4 265 aa1.87□□□□□ -2.11
HMGB1P49-201ENST00000418882 TNFAIP8L1Q8WVP5 186 aa1.87□□□□□ -2.11
HMGB1P49-201ENST00000418882 TVP23CQ96ET8 276 aa1.87□□□□□ -2.11
HMGB1P49-201ENST00000418882 MRPL48Q96GC5 212 aaKnown RBP1.87□□□□□ -2.11
HMGB1P49-201ENST00000418882 TIPINQ9BVW5 301 aa1.87□□□□□ -2.11
HMGB1P49-201ENST00000418882 PECRQ9BY49 303 aa1.87□□□□□ -2.11
HMGB1P49-201ENST00000418882 GNB1LQ9BYB4 327 aa1.87□□□□□ -2.11
HMGB1P49-201ENST00000418882 SLC2A9Q9NRM0 540 aa1.87□□□□□ -2.11
HMGB1P49-201ENST00000418882 DKKL1Q9UK85 242 aa1.87□□□□□ -2.11
HMGB1P49-201ENST00000418882 POMPQ9Y244 141 aa1.87□□□□□ -2.11
HMGB1P49-201ENST00000418882 BAZ2AQ9UIF9 1905 aaKnown RBP1.87□□□□□ -2.11
HMGB1P49-201ENST00000418882 A0A087WUJ7 227 aa1.86□□□□□ -2.11
HMGB1P49-201ENST00000418882 GOLGA6L4A6NEF3 574 aa1.86□□□□□ -2.11
HMGB1P49-201ENST00000418882 CLDN24A6NM45 220 aa1.86□□□□□ -2.11
HMGB1P49-201ENST00000418882 OR5K4A6NMS3 321 aa1.86□□□□□ -2.11
HMGB1P49-201ENST00000418882 CHP2O43745 196 aa1.86□□□□□ -2.11
HMGB1P49-201ENST00000418882 STX10O60499 249 aa1.86□□□□□ -2.11
HMGB1P49-201ENST00000418882 CNIH1O95406 144 aa1.86□□□□□ -2.11
HMGB1P49-201ENST00000418882 IL6P05231 212 aa1.86□□□□□ -2.11
HMGB1P49-201ENST00000418882 FABP1P07148 127 aa1.86□□□□□ -2.11
HMGB1P49-201ENST00000418882 SOD3P08294 240 aa1.86□□□□□ -2.11
HMGB1P49-201ENST00000418882 ALOX5APP20292 161 aa1.86□□□□□ -2.11
HMGB1P49-201ENST00000418882 IMPA1P29218 277 aa1.86□□□□□ -2.11
HMGB1P49-201ENST00000418882 AGTR1P30556 359 aa1.86□□□□□ -2.11
HMGB1P49-201ENST00000418882 CCR7P32248 378 aa1.86□□□□□ -2.11
HMGB1P49-201ENST00000418882 SULT1A2P50226 295 aa1.86□□□□□ -2.11
HMGB1P49-201ENST00000418882 RAB25P57735 213 aa1.86□□□□□ -2.11
HMGB1P49-201ENST00000418882 OR4D2P58180 307 aa1.86□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms