RNA–Protein interactions for RNA: ENST00000413442.5

USP54-202, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 4

Gene USP54, Length 543 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-202ENST00000413442 BANF2Q9H503 90 aa5.13□□□□□ -1.59
USP54-202ENST00000413442 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP5.13□□□□□ -1.59
USP54-202ENST00000413442 ZFP57Q9NU63 452 aa5.13□□□□□ -1.59
USP54-202ENST00000413442 GNG12Q9UBI6 72 aa5.13□□□□□ -1.59
USP54-202ENST00000413442 STUB1Q9UNE7 303 aa5.13□□□□□ -1.59
USP54-202ENST00000413442 RRP15Q9Y3B9 282 aaKnown RBP5.13□□□□□ -1.59
USP54-202ENST00000413442 STAB1Q9NY15 2570 aa5.12□□□□□ -1.59
USP54-202ENST00000413442 IGHV1-3A0A0C4DH29 117 aa5.12□□□□□ -1.59
USP54-202ENST00000413442 MAGEA13PA6NCF6 341 aa5.12□□□□□ -1.59
USP54-202ENST00000413442 NOTOA8MTQ0 251 aa5.12□□□□□ -1.59
USP54-202ENST00000413442 C12orf77C9JDV5 145 aa5.12□□□□□ -1.59
USP54-202ENST00000413442 HSPB6O14558 160 aa5.12□□□□□ -1.59
USP54-202ENST00000413442 HSD17B6O14756 317 aa5.12□□□□□ -1.59
USP54-202ENST00000413442 LDLRAD4O15165 306 aa5.12□□□□□ -1.59
USP54-202ENST00000413442 SLC22A5O76082 557 aa5.12□□□□□ -1.59
USP54-202ENST00000413442 TNFAIP8O95379 198 aa5.12□□□□□ -1.59
USP54-202ENST00000413442 MOSP00540 346 aa5.12□□□□□ -1.59
USP54-202ENST00000413442 JUNBP17275 347 aaPredicted RBP5.12□□□□□ -1.59
USP54-202ENST00000413442 RCC1P18754 421 aaPredicted RBP5.12□□□□□ -1.59
USP54-202ENST00000413442 SSTR5P35346 364 aa5.12□□□□□ -1.59
USP54-202ENST00000413442 RAB13P51153 203 aa5.12□□□□□ -1.59
USP54-202ENST00000413442 DLX1P56177 255 aa5.12□□□□□ -1.59
USP54-202ENST00000413442 RPS25P62851 125 aaKnown RBP5.12□□□□□ -1.59
USP54-202ENST00000413442 SLC35B1P78383 322 aa5.12□□□□□ -1.59
USP54-202ENST00000413442 HMGN3Q15651 99 aa5.12□□□□□ -1.59
USP54-202ENST00000413442 LY6EQ16553 131 aa5.12□□□□□ -1.59
USP54-202ENST00000413442 ARSJQ5FYB0 599 aaPredicted RBP5.12□□□□□ -1.59
USP54-202ENST00000413442 LDLRAD2Q5SZI1 272 aa5.12□□□□□ -1.59
USP54-202ENST00000413442 CCBE1Q6UXH8 406 aaPredicted RBP5.12□□□□□ -1.59
USP54-202ENST00000413442 Q6ZS49 121 aa5.12□□□□□ -1.59
USP54-202ENST00000413442 CENPVQ7Z7K6 275 aaPredicted RBP5.12□□□□□ -1.59
USP54-202ENST00000413442 NDUFA11Q86Y39 141 aa5.12□□□□□ -1.59
USP54-202ENST00000413442 TGIF2LXQ8IUE1 241 aa5.12□□□□□ -1.59
USP54-202ENST00000413442 FOXRED2Q8IWF2 684 aa5.12□□□□□ -1.59
USP54-202ENST00000413442 ZNF436-AS1Q8NC38 126 aaPredicted RBP5.12□□□□□ -1.59
USP54-202ENST00000413442 ZNF439Q8NDP4 499 aa5.12□□□□□ -1.59
USP54-202ENST00000413442 OR4F17Q8NGA8 305 aa5.12□□□□□ -1.59
USP54-202ENST00000413442 OR51D1Q8NGF3 324 aa5.12□□□□□ -1.59
USP54-202ENST00000413442 OR4K15Q8NH41 348 aa5.12□□□□□ -1.59
USP54-202ENST00000413442 RFESDQ8TAC1 157 aa5.12□□□□□ -1.59
USP54-202ENST00000413442 MRPL30Q8TCC3 161 aaKnown RBP5.12□□□□□ -1.59
USP54-202ENST00000413442 C17orf50Q8WW18 174 aa5.12□□□□□ -1.59
USP54-202ENST00000413442 RTN4IP1Q8WWV3 396 aaPredicted RBP5.12□□□□□ -1.59
USP54-202ENST00000413442 PHF21AQ96BD5 680 aa5.12□□□□□ -1.59
USP54-202ENST00000413442 ORAI1Q96D31 301 aa5.12□□□□□ -1.59
USP54-202ENST00000413442 RAB3CQ96E17 227 aa5.12□□□□□ -1.59
USP54-202ENST00000413442 KCTD7Q96MP8 289 aa5.12□□□□□ -1.59
USP54-202ENST00000413442 OR4F4Q96R69 305 aa5.12□□□□□ -1.59
USP54-202ENST00000413442 S1PR3Q99500 378 aa5.12□□□□□ -1.59
USP54-202ENST00000413442 SLC25A33Q9BSK2 321 aa5.12□□□□□ -1.59
USP54-202ENST00000413442 FAAP24Q9BTP7 215 aa5.12□□□□□ -1.59
USP54-202ENST00000413442 DCSTAMPQ9H295 470 aa5.12□□□□□ -1.59
USP54-202ENST00000413442 C12orf4Q9NQ89 552 aa5.12□□□□□ -1.59
USP54-202ENST00000413442 SERTAD4Q9NUC0 356 aa5.12□□□□□ -1.59
USP54-202ENST00000413442 LIN7CQ9NUP9 197 aaKnown RBP5.12□□□□□ -1.59
USP54-202ENST00000413442 ZMAT5Q9UDW3 170 aaKnown RBP5.12□□□□□ -1.59
USP54-202ENST00000413442 MOB4Q9Y3A3 225 aa5.12□□□□□ -1.59
USP54-202ENST00000413442 AK6Q9Y3D8 172 aaKnown RBP5.12□□□□□ -1.59
USP54-202ENST00000413442 TET2Q6N021 2002 aaPredicted RBP5.12□□□□□ -1.59
USP54-202ENST00000413442 A0A1W2PP11 408 aa5.11□□□□□ -1.59
USP54-202ENST00000413442 A0A1W2PPI3 338 aa5.11□□□□□ -1.59
USP54-202ENST00000413442 UBE2QL1A1L167 161 aa5.11□□□□□ -1.59
USP54-202ENST00000413442 FOXI3A8MTJ6 420 aaPredicted RBP5.11□□□□□ -1.59
USP54-202ENST00000413442 TRDCB7Z8K6 153 aa5.11□□□□□ -1.59
USP54-202ENST00000413442 FBXO24O75426 580 aa5.11□□□□□ -1.59
USP54-202ENST00000413442 RBBP9O75884 186 aa5.11□□□□□ -1.59
USP54-202ENST00000413442 DUS4LO95620 317 aaKnown RBP5.11□□□□□ -1.59
USP54-202ENST00000413442 IGHG2P01859 326 aa5.11□□□□□ -1.59
USP54-202ENST00000413442 GSTP1P09211 210 aaKnown RBP5.11□□□□□ -1.59
USP54-202ENST00000413442 CSF1P09603 554 aa5.11□□□□□ -1.59
USP54-202ENST00000413442 CD3GP09693 182 aa5.11□□□□□ -1.59
USP54-202ENST00000413442 OR5H8P0DN80 308 aa5.11□□□□□ -1.59
USP54-202ENST00000413442 TMEM11P17152 192 aa5.11□□□□□ -1.59
USP54-202ENST00000413442 GDNFP39905 211 aa5.11□□□□□ -1.59
USP54-202ENST00000413442 VDAC2P45880 294 aaPredicted RBP5.11□□□□□ -1.59
USP54-202ENST00000413442 MAP2K4P45985 399 aa5.11□□□□□ -1.59
USP54-202ENST00000413442 VEGFCP49767 419 aa5.11□□□□□ -1.59
USP54-202ENST00000413442 TMEM50BP56557 158 aa5.11□□□□□ -1.59
USP54-202ENST00000413442 CD83Q01151 205 aa5.11□□□□□ -1.59
USP54-202ENST00000413442 UNC119Q13432 240 aa5.11□□□□□ -1.59
USP54-202ENST00000413442 PNLIPRP3Q17RR3 467 aa5.11□□□□□ -1.59
USP54-202ENST00000413442 CT45A1Q5HYN5 189 aa5.11□□□□□ -1.59
USP54-202ENST00000413442 FAM27D1Q5T7N8 215 aa5.11□□□□□ -1.59
USP54-202ENST00000413442 MOB3BQ86TA1 216 aa5.11□□□□□ -1.59
USP54-202ENST00000413442 OR2AK2Q8NG84 335 aa5.11□□□□□ -1.59
USP54-202ENST00000413442 OR4X2Q8NGF9 303 aa5.11□□□□□ -1.59
USP54-202ENST00000413442 OR4A4PQ8NGN8 299 aa5.11□□□□□ -1.59
USP54-202ENST00000413442 OR10R2Q8NGX6 335 aa5.11□□□□□ -1.59
USP54-202ENST00000413442 CT45A3Q8NHU0 189 aa5.11□□□□□ -1.59
USP54-202ENST00000413442 WIPF2Q8TF74 440 aaPredicted RBP5.11□□□□□ -1.59
USP54-202ENST00000413442 CCDC107Q8WV48 283 aa5.11□□□□□ -1.59
USP54-202ENST00000413442 FAM46BQ96A09 425 aa5.11□□□□□ -1.59
USP54-202ENST00000413442 CMTM3Q96MX0 182 aa5.11□□□□□ -1.59
USP54-202ENST00000413442 NKX3-1Q99801 234 aaPredicted RBP5.11□□□□□ -1.59
USP54-202ENST00000413442 CMSS1Q9BQ75 279 aaKnown RBP5.11□□□□□ -1.59
USP54-202ENST00000413442 SULT4A1Q9BR01 284 aa5.11□□□□□ -1.59
USP54-202ENST00000413442 ZNF702PQ9H963 129 aa5.11□□□□□ -1.59
USP54-202ENST00000413442 CHMP1AQ9HD42 196 aaPredicted RBP5.11□□□□□ -1.59
USP54-202ENST00000413442 Q9N2K0 584 aa5.11□□□□□ -1.59
USP54-202ENST00000413442 TXNL4BQ9NX01 149 aaKnown RBP5.11□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms