RNA–Protein interactions for RNA: ENST00000411517.2

RAB28P1-201, Transcript of RAB28, member RAS oncogene family pseudogene 1, humanhuman

BASIC

Gene RAB28P1, Length 641 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB28P1-201ENST00000411517 HOXB9P17482 250 aaPredicted RBP3.14□□□□□ -1.91
RAB28P1-201ENST00000411517 RBM34P42696 430 aaKnown RBP3.14□□□□□ -1.91
RAB28P1-201ENST00000411517 PRKXP51817 358 aa3.14□□□□□ -1.91
RAB28P1-201ENST00000411517 CX3CL1P78423 397 aa3.14□□□□□ -1.91
RAB28P1-201ENST00000411517 AESQ08117 197 aa3.14□□□□□ -1.91
RAB28P1-201ENST00000411517 MAD2L1Q13257 205 aaPredicted RBP3.14□□□□□ -1.91
RAB28P1-201ENST00000411517 SLC36A3Q495N2 470 aa3.14□□□□□ -1.91
RAB28P1-201ENST00000411517 LCN1P1Q5VSP4 162 aa3.14□□□□□ -1.91
RAB28P1-201ENST00000411517 DNM1P34Q6PK57 102 aa3.14□□□□□ -1.91
RAB28P1-201ENST00000411517 FAM131AQ6UXB0 335 aa3.14□□□□□ -1.91
RAB28P1-201ENST00000411517 CLEC19AQ6UXS0 136 aa3.14□□□□□ -1.91
RAB28P1-201ENST00000411517 SLC16A12Q6ZSM3 486 aa3.14□□□□□ -1.91
RAB28P1-201ENST00000411517 ZNF621Q6ZSS3 439 aa3.14□□□□□ -1.91
RAB28P1-201ENST00000411517 ARL6IP6Q8N6S5 226 aa3.14□□□□□ -1.91
RAB28P1-201ENST00000411517 RNF148Q8N7C7 305 aa3.14□□□□□ -1.91
RAB28P1-201ENST00000411517 LFNGQ8NES3 379 aa3.14□□□□□ -1.91
RAB28P1-201ENST00000411517 TWIST2Q8WVJ9 160 aa3.14□□□□□ -1.91
RAB28P1-201ENST00000411517 LEAP2Q969E1 77 aa3.14□□□□□ -1.91
RAB28P1-201ENST00000411517 TESCQ96BS2 214 aa3.14□□□□□ -1.91
RAB28P1-201ENST00000411517 ZNF570Q96NI8 536 aa3.14□□□□□ -1.91
RAB28P1-201ENST00000411517 OR52E6Q96RD3 313 aa3.14□□□□□ -1.91
RAB28P1-201ENST00000411517 ZNF251Q9BRH9 671 aa3.14□□□□□ -1.91
RAB28P1-201ENST00000411517 COPS4Q9BT78 406 aa3.14□□□□□ -1.91
RAB28P1-201ENST00000411517 TXLNGYQ9BZA5 131 aa3.14□□□□□ -1.91
RAB28P1-201ENST00000411517 CENPMQ9NSP4 180 aa3.14□□□□□ -1.91
RAB28P1-201ENST00000411517 ZNF586Q9NXT0 402 aa3.14□□□□□ -1.91
RAB28P1-201ENST00000411517 U3KQV3 271 aa3.14□□□□□ -1.91
RAB28P1-201ENST00000411517 KBTBD11-OT1A0A1B0GTJ5 212 aa3.13□□□□□ -1.91
RAB28P1-201ENST00000411517 TEX48A0A1B0GUV7 120 aa3.13□□□□□ -1.91
RAB28P1-201ENST00000411517 ODAMA1E959 279 aa3.13□□□□□ -1.91
RAB28P1-201ENST00000411517 TMEM213A2RRL7 107 aa3.13□□□□□ -1.91
RAB28P1-201ENST00000411517 OR4C46A6NHA9 309 aa3.13□□□□□ -1.91
RAB28P1-201ENST00000411517 TSPAN4O14817 238 aa3.13□□□□□ -1.91
RAB28P1-201ENST00000411517 NDUFA3O95167 84 aa3.13□□□□□ -1.91
RAB28P1-201ENST00000411517 TNFRSF6BO95407 300 aa3.13□□□□□ -1.91
RAB28P1-201ENST00000411517 SPART-AS1P0CW21 52 aa3.13□□□□□ -1.91
RAB28P1-201ENST00000411517 FCGR1AP12314 374 aa3.13□□□□□ -1.91
RAB28P1-201ENST00000411517 ATP6V1B1P15313 513 aa3.13□□□□□ -1.91
RAB28P1-201ENST00000411517 HTN3P15516 51 aa3.13□□□□□ -1.91
RAB28P1-201ENST00000411517 IL3RAP26951 378 aa3.13□□□□□ -1.91
RAB28P1-201ENST00000411517 CRABP1P29762 137 aa3.13□□□□□ -1.91
RAB28P1-201ENST00000411517 CDKN2CP42773 168 aa3.13□□□□□ -1.91
RAB28P1-201ENST00000411517 HAAOP46952 286 aa3.13□□□□□ -1.91
RAB28P1-201ENST00000411517 OR3A1P47881 315 aa3.13□□□□□ -1.91
RAB28P1-201ENST00000411517 ERVK11-1P61568 191 aa3.13□□□□□ -1.91
RAB28P1-201ENST00000411517 SF3A3Q12874 501 aaKnown RBP eCLIP3.13□□□□□ -1.91
RAB28P1-201ENST00000411517 BNIP1Q12981 228 aa3.13□□□□□ -1.91
RAB28P1-201ENST00000411517 KRR1Q13601 381 aaKnown RBP3.13□□□□□ -1.91
RAB28P1-201ENST00000411517 SCARB2Q14108 478 aa3.13□□□□□ -1.91
RAB28P1-201ENST00000411517 PTGES3Q15185 160 aaKnown RBP3.13□□□□□ -1.91
RAB28P1-201ENST00000411517 C17orf58Q2M2W7 97 aa3.13□□□□□ -1.91
RAB28P1-201ENST00000411517 ANKDD1AQ495B1 522 aa3.13□□□□□ -1.91
RAB28P1-201ENST00000411517 SPANXN4Q5MJ08 99 aa3.13□□□□□ -1.91
RAB28P1-201ENST00000411517 TMEM69Q5SWH9 247 aa3.13□□□□□ -1.91
RAB28P1-201ENST00000411517 KRTAP5-2Q701N4 177 aa3.13□□□□□ -1.91
RAB28P1-201ENST00000411517 SSX7Q7RTT5 188 aa3.13□□□□□ -1.91
RAB28P1-201ENST00000411517 ADCK1Q86TW2 530 aa3.13□□□□□ -1.91
RAB28P1-201ENST00000411517 LCA5Q86VQ0 697 aa3.13□□□□□ -1.91
RAB28P1-201ENST00000411517 ZNF573Q86YE8 665 aa3.13□□□□□ -1.91
RAB28P1-201ENST00000411517 APRG1Q8IVJ8 170 aa3.13□□□□□ -1.91
RAB28P1-201ENST00000411517 BATF2Q8N1L9 274 aa3.13□□□□□ -1.91
RAB28P1-201ENST00000411517 LINC00471Q8N535 108 aa3.13□□□□□ -1.91
RAB28P1-201ENST00000411517 DNAAF1Q8NEP3 725 aa3.13□□□□□ -1.91
RAB28P1-201ENST00000411517 BBS1Q8NFJ9 593 aa3.13□□□□□ -1.91
RAB28P1-201ENST00000411517 NPBQ8NG41 125 aa3.13□□□□□ -1.91
RAB28P1-201ENST00000411517 OR5A2Q8NGI9 324 aa3.13□□□□□ -1.91
RAB28P1-201ENST00000411517 MAL2Q969L2 176 aa3.13□□□□□ -1.91
RAB28P1-201ENST00000411517 Q96M85 177 aa3.13□□□□□ -1.91
RAB28P1-201ENST00000411517 FAM103A1Q9BTL3 118 aaKnown RBP3.13□□□□□ -1.91
RAB28P1-201ENST00000411517 C1QTNF4Q9BXJ3 329 aa3.13□□□□□ -1.91
RAB28P1-201ENST00000411517 PARP12Q9H0J9 701 aaKnown RBP3.13□□□□□ -1.91
RAB28P1-201ENST00000411517 C5orf66Q9H5L9 145 aa3.13□□□□□ -1.91
RAB28P1-201ENST00000411517 NIPAL2Q9H841 368 aa3.13□□□□□ -1.91
RAB28P1-201ENST00000411517 NMNAT1Q9HAN9 279 aaPredicted RBP3.13□□□□□ -1.91
RAB28P1-201ENST00000411517 TMEM216Q9P0N5 145 aa3.13□□□□□ -1.91
RAB28P1-201ENST00000411517 CACNG5Q9UF02 275 aa3.13□□□□□ -1.91
RAB28P1-201ENST00000411517 TBC1D24Q9ULP9 559 aa3.13□□□□□ -1.91
RAB28P1-201ENST00000411517 TRAV27A0A087WT01 109 aa3.12□□□□□ -1.91
RAB28P1-201ENST00000411517 A0A1W2PPE3 182 aa3.12□□□□□ -1.91
RAB28P1-201ENST00000411517 PGRMC1O00264 195 aaKnown RBP3.12□□□□□ -1.91
RAB28P1-201ENST00000411517 DYNC1I1O14576 645 aa3.12□□□□□ -1.91
RAB28P1-201ENST00000411517 MRPS14O60783 128 aaKnown RBP3.12□□□□□ -1.91
RAB28P1-201ENST00000411517 CD14P08571 375 aa3.12□□□□□ -1.91
RAB28P1-201ENST00000411517 IGFBP3P17936 291 aaPredicted RBP3.12□□□□□ -1.91
RAB28P1-201ENST00000411517 MPZP25189 248 aa3.12□□□□□ -1.91
RAB28P1-201ENST00000411517 S100A3P33764 101 aa3.12□□□□□ -1.91
RAB28P1-201ENST00000411517 CDKN1BP46527 198 aa3.12□□□□□ -1.91
RAB28P1-201ENST00000411517 CX3CR1P49238 355 aa3.12□□□□□ -1.91
RAB28P1-201ENST00000411517 ATP1B3P54709 279 aa3.12□□□□□ -1.91
RAB28P1-201ENST00000411517 KRTAP10-12P60413 245 aa3.12□□□□□ -1.91
RAB28P1-201ENST00000411517 CDC42P60953 191 aa3.12□□□□□ -1.91
RAB28P1-201ENST00000411517 RPL37AP61513 92 aaKnown RBP3.12□□□□□ -1.91
RAB28P1-201ENST00000411517 DEFA5Q01523 94 aa3.12□□□□□ -1.91
RAB28P1-201ENST00000411517 OXA1LQ15070 435 aa3.12□□□□□ -1.91
RAB28P1-201ENST00000411517 ATAD3CQ5T2N8 411 aa3.12□□□□□ -1.91
RAB28P1-201ENST00000411517 OR4A47Q6IF82 309 aa3.12□□□□□ -1.91
RAB28P1-201ENST00000411517 SCXQ7RTU7 201 aa3.12□□□□□ -1.91
RAB28P1-201ENST00000411517 FAM122BQ7Z309 247 aa3.12□□□□□ -1.91
RAB28P1-201ENST00000411517 ADAD2Q8NCV1 583 aaKnown RBP3.12□□□□□ -1.91
RAB28P1-201ENST00000411517 OR6T1Q8NGN1 323 aa3.12□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 75.6 ms