RNA–Protein interactions for RNA: ENST00000409025.5

USP39-202, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 5 BASIC

Gene USP39, Length 1,946 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-202ENST00000409025 F5H0A9 414 aaPredicted RBP15.85■□□□□ 0.13
USP39-202ENST00000409025 DEDDO75618 318 aa15.85■□□□□ 0.13
USP39-202ENST00000409025 CD55P08174 381 aa15.85■□□□□ 0.13
USP39-202ENST00000409025 TNFRSF1AP19438 455 aa15.85■□□□□ 0.13
USP39-202ENST00000409025 ANGPTL6Q8NI99 470 aa15.85■□□□□ 0.13
USP39-202ENST00000409025 IL22RA2Q969J5 263 aa15.85■□□□□ 0.13
USP39-202ENST00000409025 NDRG3Q9UGV2 375 aa15.85■□□□□ 0.13
USP39-202ENST00000409025 PPP1R3CQ9UQK1 317 aa15.85■□□□□ 0.13
USP39-202ENST00000409025 PCNX1Q96RV3 2341 aa15.84■□□□□ 0.13
USP39-202ENST00000409025 PIGBOS1A0A0B4J2F0 54 aa15.84■□□□□ 0.13
USP39-202ENST00000409025 WNT2P09544 360 aa15.84■□□□□ 0.13
USP39-202ENST00000409025 KDF1Q8NAX2 398 aaPredicted RBP15.84■□□□□ 0.13
USP39-202ENST00000409025 OR52L2PQ8NGH6 319 aa15.84■□□□□ 0.13
USP39-202ENST00000409025 RBPMSQ93062 196 aaKnown RBP15.84■□□□□ 0.13
USP39-202ENST00000409025 ARL11Q969Q4 196 aa15.84■□□□□ 0.13
USP39-202ENST00000409025 PLPPR2Q96GM1 343 aa15.84■□□□□ 0.13
USP39-202ENST00000409025 SPIN2AQ99865 258 aa15.84■□□□□ 0.13
USP39-202ENST00000409025 SPIN2BQ9BPZ2 258 aa15.84■□□□□ 0.13
USP39-202ENST00000409025 TOLLIPQ9H0E2 274 aa15.84■□□□□ 0.13
USP39-202ENST00000409025 PARP12Q9H0J9 701 aaKnown RBP15.84■□□□□ 0.13
USP39-202ENST00000409025 KIAA2026Q5HYC2 2103 aa15.84■□□□□ 0.13
USP39-202ENST00000409025 SHISA9B4DS77 424 aa15.84■□□□□ 0.13
USP39-202ENST00000409025 K7N7A8 449 aa15.84■□□□□ 0.13
USP39-202ENST00000409025 SPINT2O43291 252 aa15.84■□□□□ 0.13
USP39-202ENST00000409025 CYB5R3P00387 301 aaPredicted RBP15.84■□□□□ 0.13
USP39-202ENST00000409025 IGLV2-14P01704 120 aa15.84■□□□□ 0.13
USP39-202ENST00000409025 MBPP02686 304 aaPredicted RBP15.84■□□□□ 0.13
USP39-202ENST00000409025 FAM201AQ5SY85 155 aa15.84■□□□□ 0.13
USP39-202ENST00000409025 OR51H1Q8NH63 302 aa15.84■□□□□ 0.13
USP39-202ENST00000409025 PCNPQ8WW12 178 aaKnown RBP15.84■□□□□ 0.13
USP39-202ENST00000409025 LRRC46Q96FV0 321 aa15.84■□□□□ 0.13
USP39-202ENST00000409025 ODAMA1E959 279 aa15.83■□□□□ 0.12
USP39-202ENST00000409025 NKX2-6A6NCS4 301 aa15.83■□□□□ 0.12
USP39-202ENST00000409025 MSGN1A6NI15 193 aa15.83■□□□□ 0.12
USP39-202ENST00000409025 SSTR5P35346 364 aa15.83■□□□□ 0.12
USP39-202ENST00000409025 CCL8P80075 99 aa15.83■□□□□ 0.12
USP39-202ENST00000409025 TLE1Q04724 770 aa15.83■□□□□ 0.12
USP39-202ENST00000409025 LY6DQ14210 128 aa15.83■□□□□ 0.12
USP39-202ENST00000409025 ZNF561Q8N587 486 aa15.83■□□□□ 0.12
USP39-202ENST00000409025 ZNRF1Q8ND25 227 aa15.83■□□□□ 0.12
USP39-202ENST00000409025 OR52M1Q8NGK5 317 aa15.83■□□□□ 0.12
USP39-202ENST00000409025 K7EPK0 472 aa15.82■□□□□ 0.12
USP39-202ENST00000409025 SERPINE2P07093 398 aa15.82■□□□□ 0.12
USP39-202ENST00000409025 CD3EP07766 207 aa15.82■□□□□ 0.12
USP39-202ENST00000409025 GZMHP20718 246 aa15.82■□□□□ 0.12
USP39-202ENST00000409025 VDAC1P21796 283 aa15.82■□□□□ 0.12
USP39-202ENST00000409025 FAM71E2Q8N5Q1 922 aa15.82■□□□□ 0.12
USP39-202ENST00000409025 EGLN1Q9GZT9 426 aa15.82■□□□□ 0.12
USP39-202ENST00000409025 OR2S2Q9NQN1 319 aa15.82■□□□□ 0.12
USP39-202ENST00000409025 LRRC30A6NM36 301 aa15.82■□□□□ 0.12
USP39-202ENST00000409025 ADORA2A-AS1P86434 159 aa15.82■□□□□ 0.12
USP39-202ENST00000409025 SNTB1Q13884 538 aaKnown RBP15.82■□□□□ 0.12
USP39-202ENST00000409025 STUMQ69YW2 141 aa15.82■□□□□ 0.12
USP39-202ENST00000409025 DMRTC2Q8IXT2 367 aaPredicted RBP15.82■□□□□ 0.12
USP39-202ENST00000409025 DRAM1Q8N682 238 aa15.82■□□□□ 0.12
USP39-202ENST00000409025 ZNF645Q8N7E2 425 aa15.82■□□□□ 0.12
USP39-202ENST00000409025 ZBTB34Q8NCN2 500 aa15.82■□□□□ 0.12
USP39-202ENST00000409025 GALNT11Q8NCW6 608 aa15.82■□□□□ 0.12
USP39-202ENST00000409025 OR4D5Q8NGN0 318 aa15.82■□□□□ 0.12
USP39-202ENST00000409025 SDSLQ96GA7 329 aa15.82■□□□□ 0.12
USP39-202ENST00000409025 CITED4Q96RK1 184 aa15.82■□□□□ 0.12
USP39-202ENST00000409025 DCTN5Q9BTE1 182 aa15.82■□□□□ 0.12
USP39-202ENST00000409025 ZC4H2Q9NQZ6 224 aa15.82■□□□□ 0.12
USP39-202ENST00000409025 PLCE1Q9P212 2302 aa15.81■□□□□ 0.12
USP39-202ENST00000409025 RNF212BA8MTL3 300 aa15.81■□□□□ 0.12
USP39-202ENST00000409025 E5RGE8 158 aa15.81■□□□□ 0.12
USP39-202ENST00000409025 E7EQL1 145 aa15.81■□□□□ 0.12
USP39-202ENST00000409025 C15orf65H3BRN8 121 aa15.81■□□□□ 0.12
USP39-202ENST00000409025 ST8SIA3O43173 380 aa15.81■□□□□ 0.12
USP39-202ENST00000409025 HKR1P10072 659 aa15.81■□□□□ 0.12
USP39-202ENST00000409025 MUC1P15941 1255 aaPredicted RBP15.81■□□□□ 0.12
USP39-202ENST00000409025 P2RX3P56373 397 aa15.81■□□□□ 0.12
USP39-202ENST00000409025 HTD2P86397 168 aa15.81■□□□□ 0.12
USP39-202ENST00000409025 GNMTQ14749 295 aa15.81■□□□□ 0.12
USP39-202ENST00000409025 FAM209AQ5JX71 171 aa15.81■□□□□ 0.12
USP39-202ENST00000409025 THOC7Q6I9Y2 204 aaKnown RBP15.81■□□□□ 0.12
USP39-202ENST00000409025 RFESDQ8TAC1 157 aa15.81■□□□□ 0.12
USP39-202ENST00000409025 LINC01560Q8TB33 94 aa15.81■□□□□ 0.12
USP39-202ENST00000409025 PHYHIPLQ96FC7 376 aa15.81■□□□□ 0.12
USP39-202ENST00000409025 PLEKHF2Q9H8W4 249 aa15.81■□□□□ 0.12
USP39-202ENST00000409025 PLEKHA2Q9HB19 425 aa15.81■□□□□ 0.12
USP39-202ENST00000409025 LIN7CQ9NUP9 197 aaKnown RBP15.81■□□□□ 0.12
USP39-202ENST00000409025 NSG2Q9Y328 171 aa15.81■□□□□ 0.12
USP39-202ENST00000409025 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP15.8■□□□□ 0.12
USP39-202ENST00000409025 ADAM20O43506 726 aa15.8■□□□□ 0.12
USP39-202ENST00000409025 RPL12P30050 165 aaKnown RBP15.8■□□□□ 0.12
USP39-202ENST00000409025 PPP1CCP36873 323 aaKnown RBP15.8■□□□□ 0.12
USP39-202ENST00000409025 EDDM3BP56851 147 aa15.8■□□□□ 0.12
USP39-202ENST00000409025 CR1LQ2VPA4 569 aa15.8■□□□□ 0.12
USP39-202ENST00000409025 DEFB108BQ8NET1 73 aa15.8■□□□□ 0.12
USP39-202ENST00000409025 OR2D2Q9H210 308 aa15.8■□□□□ 0.12
USP39-202ENST00000409025 NCOR1P1Q9H4R4 102 aa15.8■□□□□ 0.12
USP39-202ENST00000409025 DYSFO75923 2080 aa15.8■□□□□ 0.12
USP39-202ENST00000409025 POLEQ07864 2286 aa15.8■□□□□ 0.12
USP39-202ENST00000409025 ANKRD34BA5PLL1 514 aa15.8■□□□□ 0.12
USP39-202ENST00000409025 NMSQ5H8A3 153 aa15.8■□□□□ 0.12
USP39-202ENST00000409025 TEX36Q5VZQ5 186 aa15.8■□□□□ 0.12
USP39-202ENST00000409025 STOML3Q8TAV4 291 aa15.8■□□□□ 0.12
USP39-202ENST00000409025 ZNF665Q9H7R5 613 aa15.8■□□□□ 0.12
USP39-202ENST00000409025 SAP30LQ9HAJ7 183 aa15.8■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 84 ms