RNA–Protein interactions for RNA: ENST00000403971.2

HMGB3P19-201, Transcript of high mobility group box 3 pseudogene 19, humanhuman

BASIC

Gene HMGB3P19, Length 560 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P19-201ENST00000403971 SLC16A14Q7RTX9 510 aa3.52□□□□□ -1.85
HMGB3P19-201ENST00000403971 FAM220AQ7Z4H9 259 aa3.52□□□□□ -1.85
HMGB3P19-201ENST00000403971 DCXRQ7Z4W1 244 aa3.52□□□□□ -1.85
HMGB3P19-201ENST00000403971 LHFPL3Q86UP9 236 aa3.52□□□□□ -1.85
HMGB3P19-201ENST00000403971 SKA3Q8IX90 412 aa3.52□□□□□ -1.85
HMGB3P19-201ENST00000403971 RPRMLQ8N4K4 120 aa3.52□□□□□ -1.85
HMGB3P19-201ENST00000403971 ZNF433Q8N7K0 673 aaPredicted RBP3.52□□□□□ -1.85
HMGB3P19-201ENST00000403971 THEM6Q8WUY1 208 aa3.52□□□□□ -1.85
HMGB3P19-201ENST00000403971 PELI1Q96FA3 418 aa3.52□□□□□ -1.85
HMGB3P19-201ENST00000403971 OR8B4Q96RC9 309 aa3.52□□□□□ -1.85
HMGB3P19-201ENST00000403971 MGLLQ99685 303 aa3.52□□□□□ -1.85
HMGB3P19-201ENST00000403971 BCL7BQ9BQE9 202 aa3.52□□□□□ -1.85
HMGB3P19-201ENST00000403971 MROQ9BYG7 248 aa3.52□□□□□ -1.85
HMGB3P19-201ENST00000403971 Q9H3A6 140 aa3.52□□□□□ -1.85
HMGB3P19-201ENST00000403971 BABAM2Q9NXR7 383 aa3.52□□□□□ -1.85
HMGB3P19-201ENST00000403971 B3GNT2Q9NY97 397 aa3.52□□□□□ -1.85
HMGB3P19-201ENST00000403971 CLEC2DQ9UHP7 191 aa3.52□□□□□ -1.85
HMGB3P19-201ENST00000403971 MRM2Q9UI43 246 aaKnown RBP3.52□□□□□ -1.85
HMGB3P19-201ENST00000403971 COPS3Q9UNS2 423 aa3.52□□□□□ -1.85
HMGB3P19-201ENST00000403971 GSTK1Q9Y2Q3 226 aa3.52□□□□□ -1.85
HMGB3P19-201ENST00000403971 POLR1DQ9Y2S0 133 aa3.52□□□□□ -1.85
HMGB3P19-201ENST00000403971 TIMM10BQ9Y5J6 103 aa3.52□□□□□ -1.85
HMGB3P19-201ENST00000403971 CFAP46Q8IYW2 2715 aa3.52□□□□□ -1.85
HMGB3P19-201ENST00000403971 RELNP78509 3460 aa3.51□□□□□ -1.85
HMGB3P19-201ENST00000403971 SMIM31A0A1B0GVY4 71 aa3.51□□□□□ -1.85
HMGB3P19-201ENST00000403971 CIB4A0PJX0 185 aa3.51□□□□□ -1.85
HMGB3P19-201ENST00000403971 OR6C6A6NF89 314 aa3.51□□□□□ -1.85
HMGB3P19-201ENST00000403971 OR5H1A6NKK0 313 aa3.51□□□□□ -1.85
HMGB3P19-201ENST00000403971 DHRS7CA6NNS2 312 aa3.51□□□□□ -1.85
HMGB3P19-201ENST00000403971 J3QLW9 94 aa3.51□□□□□ -1.85
HMGB3P19-201ENST00000403971 ZNF701M0R085 212 aaPredicted RBP3.51□□□□□ -1.85
HMGB3P19-201ENST00000403971 CCRL2O00421 344 aa3.51□□□□□ -1.85
HMGB3P19-201ENST00000403971 RER1O15258 196 aa3.51□□□□□ -1.85
HMGB3P19-201ENST00000403971 SGCEO43556 437 aa3.51□□□□□ -1.85
HMGB3P19-201ENST00000403971 SERF1AO75920 110 aa3.51□□□□□ -1.85
HMGB3P19-201ENST00000403971 LALBAP00709 142 aa3.51□□□□□ -1.85
HMGB3P19-201ENST00000403971 HSPB1P04792 205 aaKnown RBP3.51□□□□□ -1.85
HMGB3P19-201ENST00000403971 H2BFMP0C1H6 154 aa3.51□□□□□ -1.85
HMGB3P19-201ENST00000403971 PSKH1P11801 424 aa3.51□□□□□ -1.85
HMGB3P19-201ENST00000403971 CBR1P16152 277 aa3.51□□□□□ -1.85
HMGB3P19-201ENST00000403971 ZNF32P17041 273 aa3.51□□□□□ -1.85
HMGB3P19-201ENST00000403971 CRYGSP22914 178 aa3.51□□□□□ -1.85
HMGB3P19-201ENST00000403971 PSMA1P25786 263 aaKnown RBP3.51□□□□□ -1.85
HMGB3P19-201ENST00000403971 CD79BP40259 229 aa3.51□□□□□ -1.85
HMGB3P19-201ENST00000403971 MAP2K4P45985 399 aa3.51□□□□□ -1.85
HMGB3P19-201ENST00000403971 HCCSP53701 268 aa3.51□□□□□ -1.85
HMGB3P19-201ENST00000403971 OR12D2P58182 307 aa3.51□□□□□ -1.85
HMGB3P19-201ENST00000403971 UBE2NP61088 152 aaKnown RBP3.51□□□□□ -1.85
HMGB3P19-201ENST00000403971 PSG4Q00888 419 aa3.51□□□□□ -1.85
HMGB3P19-201ENST00000403971 PJVKQ0ZLH3 352 aa3.51□□□□□ -1.85
HMGB3P19-201ENST00000403971 CDK5R1Q15078 307 aa3.51□□□□□ -1.85
HMGB3P19-201ENST00000403971 TRAM1Q15629 374 aa3.51□□□□□ -1.85
HMGB3P19-201ENST00000403971 NEDD8Q15843 81 aa3.51□□□□□ -1.85
HMGB3P19-201ENST00000403971 ZNF829Q3KNS6 432 aaPredicted RBP3.51□□□□□ -1.85
HMGB3P19-201ENST00000403971 TP53I3Q53FA7 332 aa3.51□□□□□ -1.85
HMGB3P19-201ENST00000403971 TIMM23BQ5SRD1 257 aa3.51□□□□□ -1.85
HMGB3P19-201ENST00000403971 OR2G6Q5TZ20 316 aa3.51□□□□□ -1.85
HMGB3P19-201ENST00000403971 LIPNQ5VXI9 398 aa3.51□□□□□ -1.85
HMGB3P19-201ENST00000403971 TMEM53Q6P2H8 277 aa3.51□□□□□ -1.85
HMGB3P19-201ENST00000403971 RPL22L1Q6P5R6 122 aaKnown RBP3.51□□□□□ -1.85
HMGB3P19-201ENST00000403971 XKRXQ6PP77 449 aa3.51□□□□□ -1.85
HMGB3P19-201ENST00000403971 DRAM2Q6UX65 266 aa3.51□□□□□ -1.85
HMGB3P19-201ENST00000403971 LRRN1Q6UXK5 716 aa3.51□□□□□ -1.85
HMGB3P19-201ENST00000403971 BHLHA15Q7RTS1 189 aaPredicted RBP3.51□□□□□ -1.85
HMGB3P19-201ENST00000403971 C1orf174Q8IYL3 243 aa3.51□□□□□ -1.85
HMGB3P19-201ENST00000403971 LRRC18Q8N456 261 aa3.51□□□□□ -1.85
HMGB3P19-201ENST00000403971 YIPF7Q8N8F6 280 aa3.51□□□□□ -1.85
HMGB3P19-201ENST00000403971 CCDC54Q8NEL0 328 aa3.51□□□□□ -1.85
HMGB3P19-201ENST00000403971 STEAP2Q8NFT2 490 aa3.51□□□□□ -1.85
HMGB3P19-201ENST00000403971 OR2G2Q8NGZ5 317 aa3.51□□□□□ -1.85
HMGB3P19-201ENST00000403971 OR1F12Q8NHA8 337 aa3.51□□□□□ -1.85
HMGB3P19-201ENST00000403971 LILRB4Q8NHJ6 448 aa3.51□□□□□ -1.85
HMGB3P19-201ENST00000403971 SPRYD4Q8WW59 207 aaPredicted RBP3.51□□□□□ -1.85
HMGB3P19-201ENST00000403971 IL1F10Q8WWZ1 152 aa3.51□□□□□ -1.85
HMGB3P19-201ENST00000403971 THRSPQ92748 146 aa3.51□□□□□ -1.85
HMGB3P19-201ENST00000403971 SPTSSAQ969W0 71 aa3.51□□□□□ -1.85
HMGB3P19-201ENST00000403971 SLAMF6Q96DU3 332 aa3.51□□□□□ -1.85
HMGB3P19-201ENST00000403971 SMIM19Q96E16 107 aa3.51□□□□□ -1.85
HMGB3P19-201ENST00000403971 ZNF75AQ96N20 296 aa3.51□□□□□ -1.85
HMGB3P19-201ENST00000403971 OPALINQ96PE5 141 aa3.51□□□□□ -1.85
HMGB3P19-201ENST00000403971 AMELYQ99218 206 aa3.51□□□□□ -1.85
HMGB3P19-201ENST00000403971 TBX5Q99593 518 aa3.51□□□□□ -1.85
HMGB3P19-201ENST00000403971 OR2H1Q9GZK4 316 aa3.51□□□□□ -1.85
HMGB3P19-201ENST00000403971 PPDPFQ9H3Y8 114 aa3.51□□□□□ -1.85
HMGB3P19-201ENST00000403971 ELOVL3Q9HB03 270 aa3.51□□□□□ -1.85
HMGB3P19-201ENST00000403971 SLC17A5Q9NRA2 495 aa3.51□□□□□ -1.85
HMGB3P19-201ENST00000403971 OR1A1Q9P1Q5 309 aa3.51□□□□□ -1.85
HMGB3P19-201ENST00000403971 ZNF391Q9UJN7 358 aa3.51□□□□□ -1.85
HMGB3P19-201ENST00000403971 IKZF2Q9UKS7 526 aa3.51□□□□□ -1.85
HMGB3P19-201ENST00000403971 R4GMQ9 66 aa3.51□□□□□ -1.85
HMGB3P19-201ENST00000403971 DOCK11Q5JSL3 2073 aa3.51□□□□□ -1.85
HMGB3P19-201ENST00000403971 SPTAN1Q13813 2472 aaKnown RBP3.51□□□□□ -1.85
HMGB3P19-201ENST00000403971 DOPEY1Q5JWR5 2465 aa3.51□□□□□ -1.85
HMGB3P19-201ENST00000403971 DSCAMO60469 2012 aa3.51□□□□□ -1.85
HMGB3P19-201ENST00000403971 MYO18BQ8IUG5 2567 aa3.51□□□□□ -1.85
HMGB3P19-201ENST00000403971 CHD6Q8TD26 2715 aa3.5□□□□□ -1.85
HMGB3P19-201ENST00000403971 ZNF462Q96JM2 2506 aa3.5□□□□□ -1.85
HMGB3P19-201ENST00000403971 LOC100131303A0A0U1RQF7 123 aa3.5□□□□□ -1.85
HMGB3P19-201ENST00000403971 TRDV1A0A1B0GX56 115 aa3.5□□□□□ -1.85
HMGB3P19-201ENST00000403971 TMEM212A6NML5 194 aa3.5□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms