RNA–Protein interactions for RNA: ENST00000403408.2

SPTLC1P3-201, Transcript of serine palmitoyltransferase long chain base subunit 1 pseudogene 3, humanhuman

BASIC

Gene SPTLC1P3, Length 259 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1P3-201ENST00000403408 TMED9Q9BVK6 235 aa9.03□□□□□ -0.96
SPTLC1P3-201ENST00000403408 ARGLU1Q9NWB6 273 aaPredicted RBP9.03□□□□□ -0.96
SPTLC1P3-201ENST00000403408 FOXA2Q9Y261 457 aaPredicted RBP9.03□□□□□ -0.96
SPTLC1P3-201ENST00000403408 MRPS28Q9Y2Q9 187 aaKnown RBP9.03□□□□□ -0.96
SPTLC1P3-201ENST00000403408 PKD1P98161 4303 aa9.02□□□□□ -0.97
SPTLC1P3-201ENST00000403408 TCRBV3S1A0A5B6 114 aa9.02□□□□□ -0.97
SPTLC1P3-201ENST00000403408 SLC16A6O15403 523 aa9.02□□□□□ -0.97
SPTLC1P3-201ENST00000403408 TXNL1O43396 289 aa9.02□□□□□ -0.97
SPTLC1P3-201ENST00000403408 OR7C1O76099 320 aaPredicted RBP9.02□□□□□ -0.97
SPTLC1P3-201ENST00000403408 RGS11O94810 467 aa9.02□□□□□ -0.97
SPTLC1P3-201ENST00000403408 HTR3BO95264 441 aa9.02□□□□□ -0.97
SPTLC1P3-201ENST00000403408 OR3A3P47888 321 aa9.02□□□□□ -0.97
SPTLC1P3-201ENST00000403408 RBM11P57052 281 aaKnown RBP9.02□□□□□ -0.97
SPTLC1P3-201ENST00000403408 EWSR1Q01844 656 aaKnown RBP eCLIP9.02□□□□□ -0.97
SPTLC1P3-201ENST00000403408 RAB40BQ12829 278 aa9.02□□□□□ -0.97
SPTLC1P3-201ENST00000403408 ALKBH1Q13686 389 aaKnown RBP9.02□□□□□ -0.97
SPTLC1P3-201ENST00000403408 Q3ZCU0 254 aa9.02□□□□□ -0.97
SPTLC1P3-201ENST00000403408 KDM4DQ6B0I6 523 aa9.02□□□□□ -0.97
SPTLC1P3-201ENST00000403408 LIN54Q6MZP7 749 aa9.02□□□□□ -0.97
SPTLC1P3-201ENST00000403408 ANKRD13BQ86YJ7 626 aa9.02□□□□□ -0.97
SPTLC1P3-201ENST00000403408 RGP1Q92546 391 aaPredicted RBP9.02□□□□□ -0.97
SPTLC1P3-201ENST00000403408 NSL1Q96IY1 281 aa9.02□□□□□ -0.97
SPTLC1P3-201ENST00000403408 WFDC10AQ9H1F0 79 aa9.02□□□□□ -0.97
SPTLC1P3-201ENST00000403408 FBXL15Q9H469 300 aa9.02□□□□□ -0.97
SPTLC1P3-201ENST00000403408 ST3GAL6Q9Y274 331 aa9.02□□□□□ -0.97
SPTLC1P3-201ENST00000403408 ARL2BPQ9Y2Y0 163 aa9.02□□□□□ -0.97
SPTLC1P3-201ENST00000403408 CEPT1Q9Y6K0 416 aa9.02□□□□□ -0.97
SPTLC1P3-201ENST00000403408 HBZP02008 142 aa9.01□□□□□ -0.97
SPTLC1P3-201ENST00000403408 CSN3P07498 182 aa9.01□□□□□ -0.97
SPTLC1P3-201ENST00000403408 HTR1AP08908 422 aa9.01□□□□□ -0.97
SPTLC1P3-201ENST00000403408 RCC1P18754 421 aaPredicted RBP9.01□□□□□ -0.97
SPTLC1P3-201ENST00000403408 FSTP19883 344 aa9.01□□□□□ -0.97
SPTLC1P3-201ENST00000403408 MECP2P51608 486 aaKnown RBP9.01□□□□□ -0.97
SPTLC1P3-201ENST00000403408 KLF5Q13887 457 aaPredicted RBP9.01□□□□□ -0.97
SPTLC1P3-201ENST00000403408 NHLRC3Q5JS37 347 aa9.01□□□□□ -0.97
SPTLC1P3-201ENST00000403408 RNLSQ5VYX0 342 aa9.01□□□□□ -0.97
SPTLC1P3-201ENST00000403408 CD200R1LQ6Q8B3 271 aa9.01□□□□□ -0.97
SPTLC1P3-201ENST00000403408 FAM220AQ7Z4H9 259 aa9.01□□□□□ -0.97
SPTLC1P3-201ENST00000403408 SATL1Q86VE3 508 aa9.01□□□□□ -0.97
SPTLC1P3-201ENST00000403408 OR52L2PQ8NGH6 319 aa9.01□□□□□ -0.97
SPTLC1P3-201ENST00000403408 OR4K15Q8NH41 348 aa9.01□□□□□ -0.97
SPTLC1P3-201ENST00000403408 FLYWCH2Q96CP2 140 aaKnown RBP9.01□□□□□ -0.97
SPTLC1P3-201ENST00000403408 PDCD1LG2Q9BQ51 273 aa9.01□□□□□ -0.97
SPTLC1P3-201ENST00000403408 PRRG3Q9BZD7 231 aa9.01□□□□□ -0.97
SPTLC1P3-201ENST00000403408 TUBA4BQ9H853 241 aa9.01□□□□□ -0.97
SPTLC1P3-201ENST00000403408 ISG20L2Q9H9L3 353 aaKnown RBP9.01□□□□□ -0.97
SPTLC1P3-201ENST00000403408 PLEKHA3Q9HB20 300 aa9.01□□□□□ -0.97
SPTLC1P3-201ENST00000403408 GNG12Q9UBI6 72 aa9.01□□□□□ -0.97
SPTLC1P3-201ENST00000403408 MUC4Q99102 2169 aa9□□□□□ -0.97
SPTLC1P3-201ENST00000403408 J3QLW9 94 aa9□□□□□ -0.97
SPTLC1P3-201ENST00000403408 TRBV12-3P01733 135 aa9□□□□□ -0.97
SPTLC1P3-201ENST00000403408 ZNF19P17023 458 aa9□□□□□ -0.97
SPTLC1P3-201ENST00000403408 TPPP2P59282 170 aa9□□□□□ -0.97
SPTLC1P3-201ENST00000403408 DEFA5Q01523 94 aa9□□□□□ -0.97
SPTLC1P3-201ENST00000403408 RSU1Q15404 277 aa9□□□□□ -0.97
SPTLC1P3-201ENST00000403408 MORN2Q502X0 79 aa9□□□□□ -0.97
SPTLC1P3-201ENST00000403408 SYT6Q5T7P8 510 aaPredicted RBP9□□□□□ -0.97
SPTLC1P3-201ENST00000403408 ZNF660Q6AZW8 331 aaPredicted RBP9□□□□□ -0.97
SPTLC1P3-201ENST00000403408 SPATA24Q86W54 205 aa9□□□□□ -0.97
SPTLC1P3-201ENST00000403408 GAPTQ8N292 157 aa9□□□□□ -0.97
SPTLC1P3-201ENST00000403408 OR52N1Q8NH53 320 aa9□□□□□ -0.97
SPTLC1P3-201ENST00000403408 IL17DQ8TAD2 202 aa9□□□□□ -0.97
SPTLC1P3-201ENST00000403408 C4orf36Q96KX1 117 aa9□□□□□ -0.97
SPTLC1P3-201ENST00000403408 ZNF251Q9BRH9 671 aa9□□□□□ -0.97
SPTLC1P3-201ENST00000403408 THTPAQ9BU02 230 aa9□□□□□ -0.97
SPTLC1P3-201ENST00000403408 ELOVL1Q9BW60 279 aa9□□□□□ -0.97
SPTLC1P3-201ENST00000403408 FAM192AQ9GZU8 254 aa9□□□□□ -0.97
SPTLC1P3-201ENST00000403408 FAM53CQ9NYF3 392 aa9□□□□□ -0.97
SPTLC1P3-201ENST00000403408 TAS2R4Q9NYW5 299 aa9□□□□□ -0.97
SPTLC1P3-201ENST00000403408 CNOT2Q9NZN8 540 aaKnown RBP9□□□□□ -0.97
SPTLC1P3-201ENST00000403408 AIPO00170 330 aa8.99□□□□□ -0.97
SPTLC1P3-201ENST00000403408 RBMXL2O75526 392 aaKnown RBP8.99□□□□□ -0.97
SPTLC1P3-201ENST00000403408 CD7P09564 240 aa8.99□□□□□ -0.97
SPTLC1P3-201ENST00000403408 ATP6V1E1P36543 226 aa8.99□□□□□ -0.97
SPTLC1P3-201ENST00000403408 PPP1CCP36873 323 aaKnown RBP8.99□□□□□ -0.97
SPTLC1P3-201ENST00000403408 MNAT1P51948 309 aa8.99□□□□□ -0.97
SPTLC1P3-201ENST00000403408 GYS2P54840 703 aa8.99□□□□□ -0.97
SPTLC1P3-201ENST00000403408 SYNJ2BPP57105 145 aa8.99□□□□□ -0.97
SPTLC1P3-201ENST00000403408 SSBP2P81877 361 aaPredicted RBP8.99□□□□□ -0.97
SPTLC1P3-201ENST00000403408 ZNF833PQ6ZTB9 187 aa8.99□□□□□ -0.97
SPTLC1P3-201ENST00000403408 PPP1R27Q86WC6 154 aa8.99□□□□□ -0.97
SPTLC1P3-201ENST00000403408 SERPINA12Q8IW75 414 aa8.99□□□□□ -0.97
SPTLC1P3-201ENST00000403408 PRR18Q8N4B5 295 aa8.99□□□□□ -0.97
SPTLC1P3-201ENST00000403408 DEFB125Q8N687 156 aa8.99□□□□□ -0.97
SPTLC1P3-201ENST00000403408 LFNGQ8NES3 379 aa8.99□□□□□ -0.97
SPTLC1P3-201ENST00000403408 OR5D14Q8NGL3 314 aa8.99□□□□□ -0.97
SPTLC1P3-201ENST00000403408 OR9G4Q8NGQ1 327 aa8.99□□□□□ -0.97
SPTLC1P3-201ENST00000403408 ORAI1Q96D31 301 aa8.99□□□□□ -0.97
SPTLC1P3-201ENST00000403408 RDH12Q96NR8 316 aa8.99□□□□□ -0.97
SPTLC1P3-201ENST00000403408 CIB1Q99828 191 aa8.99□□□□□ -0.97
SPTLC1P3-201ENST00000403408 IL36GQ9NZH8 169 aa8.99□□□□□ -0.97
SPTLC1P3-201ENST00000403408 RCC2Q9P258 522 aaKnown RBP8.99□□□□□ -0.97
SPTLC1P3-201ENST00000403408 AASSQ9UDR5 926 aa8.99□□□□□ -0.97
SPTLC1P3-201ENST00000403408 ING4Q9UNL4 249 aa8.99□□□□□ -0.97
SPTLC1P3-201ENST00000403408 ANKRD34BA5PLL1 514 aa8.98□□□□□ -0.97
SPTLC1P3-201ENST00000403408 ZNF785A8K8V0 405 aa8.98□□□□□ -0.97
SPTLC1P3-201ENST00000403408 RRHO14718 337 aa8.98□□□□□ -0.97
SPTLC1P3-201ENST00000403408 DEDDO75618 318 aa8.98□□□□□ -0.97
SPTLC1P3-201ENST00000403408 DCTN3O75935 186 aa8.98□□□□□ -0.97
SPTLC1P3-201ENST00000403408 FAM107AO95990 144 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 84.2 ms