RNA–Protein interactions for RNA: ENST00000397763.5

COL6A2-203, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 5 BASIC

Gene COL6A2, Length 3,101 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-203ENST00000397763 UCP3P55916 312 aa11.73□□□□□ -0.53
COL6A2-203ENST00000397763 ARF1P84077 181 aaKnown RBP11.73□□□□□ -0.53
COL6A2-203ENST00000397763 ID3Q02535 119 aa11.73□□□□□ -0.53
COL6A2-203ENST00000397763 C3AR1Q16581 482 aa11.73□□□□□ -0.53
COL6A2-203ENST00000397763 SPANXN5Q5MJ07 72 aa11.73□□□□□ -0.53
COL6A2-203ENST00000397763 ASCL4Q6XD76 172 aa11.73□□□□□ -0.53
COL6A2-203ENST00000397763 WDR5BQ86VZ2 330 aa11.73□□□□□ -0.53
COL6A2-203ENST00000397763 TMEM56Q96MV1 263 aa11.73□□□□□ -0.53
COL6A2-203ENST00000397763 SPIN2AQ99865 258 aa11.73□□□□□ -0.53
COL6A2-203ENST00000397763 SPIN2BQ9BPZ2 258 aa11.73□□□□□ -0.53
COL6A2-203ENST00000397763 KCNS2Q9ULS6 477 aa11.73□□□□□ -0.53
COL6A2-203ENST00000397763 TMEM56-RWDD3S4R434 201 aa11.73□□□□□ -0.53
COL6A2-203ENST00000397763 GDF1P27539 372 aa11.73□□□□□ -0.53
COL6A2-203ENST00000397763 ZXDAP98168 799 aa11.73□□□□□ -0.53
COL6A2-203ENST00000397763 PMS2P11Q13670 270 aa11.73□□□□□ -0.53
COL6A2-203ENST00000397763 GATAD1Q8WUU5 269 aa11.73□□□□□ -0.53
COL6A2-203ENST00000397763 ATP5SQ99766 215 aa11.73□□□□□ -0.53
COL6A2-203ENST00000397763 A8MWP6 167 aa11.73□□□□□ -0.53
COL6A2-203ENST00000397763 WDR1O75083 606 aa11.73□□□□□ -0.53
COL6A2-203ENST00000397763 IFNA5P01569 189 aa11.73□□□□□ -0.53
COL6A2-203ENST00000397763 EPHA8P29322 1005 aaPredicted RBP11.73□□□□□ -0.53
COL6A2-203ENST00000397763 B3GALT5-AS1P59052 145 aa11.73□□□□□ -0.53
COL6A2-203ENST00000397763 EXT1Q16394 746 aa11.73□□□□□ -0.53
COL6A2-203ENST00000397763 PRSS8Q16651 343 aa11.73□□□□□ -0.53
COL6A2-203ENST00000397763 SPINK9Q5DT21 86 aa11.73□□□□□ -0.53
COL6A2-203ENST00000397763 FAM90A2PQ658T7 463 aa11.73□□□□□ -0.53
COL6A2-203ENST00000397763 SPINK14Q6IE38 97 aa11.73□□□□□ -0.53
COL6A2-203ENST00000397763 ZDHHC23Q8IYP9 409 aa11.73□□□□□ -0.53
COL6A2-203ENST00000397763 HLA-CQ95604 372 aa11.73□□□□□ -0.53
COL6A2-203ENST00000397763 PITPNC1Q9UKF7 332 aa11.73□□□□□ -0.53
COL6A2-203ENST00000397763 RNF150Q9ULK6 438 aa11.73□□□□□ -0.53
COL6A2-203ENST00000397763 CFAP47Q6ZTR5 3102 aa11.72□□□□□ -0.53
COL6A2-203ENST00000397763 DCHS1Q96JQ0 3298 aa11.72□□□□□ -0.53
COL6A2-203ENST00000397763 RHBDL1O75783 438 aa11.72□□□□□ -0.53
COL6A2-203ENST00000397763 P04436 131 aa11.72□□□□□ -0.53
COL6A2-203ENST00000397763 TAS2R30P59541 319 aa11.72□□□□□ -0.53
COL6A2-203ENST00000397763 DNASE2BQ8WZ79 361 aa11.72□□□□□ -0.53
COL6A2-203ENST00000397763 HIST1H2AAQ96QV6 131 aa11.72□□□□□ -0.53
COL6A2-203ENST00000397763 HES7Q9BYE0 225 aa11.72□□□□□ -0.53
COL6A2-203ENST00000397763 RNF115Q9Y4L5 304 aa11.72□□□□□ -0.53
COL6A2-203ENST00000397763 Q6ZSR3 168 aa11.72□□□□□ -0.53
COL6A2-203ENST00000397763 MRPL21Q7Z2W9 205 aaKnown RBP11.72□□□□□ -0.53
COL6A2-203ENST00000397763 OR10A7Q8NGE5 316 aa11.72□□□□□ -0.53
COL6A2-203ENST00000397763 IFI44Q8TCB0 444 aa11.72□□□□□ -0.53
COL6A2-203ENST00000397763 CPT1CQ8TCG5 803 aa11.72□□□□□ -0.53
COL6A2-203ENST00000397763 GNPNAT1Q96EK6 184 aaPredicted RBP11.72□□□□□ -0.53
COL6A2-203ENST00000397763 ELOVL1Q9BW60 279 aa11.72□□□□□ -0.53
COL6A2-203ENST00000397763 SMDT1Q9H4I9 107 aa11.72□□□□□ -0.53
COL6A2-203ENST00000397763 LOC102723971A0A1B0GUV8 181 aa11.71□□□□□ -0.53
COL6A2-203ENST00000397763 A0A1B0GW64 132 aa11.71□□□□□ -0.53
COL6A2-203ENST00000397763 KIAA1324LA8MWY0 1029 aaPredicted RBP11.71□□□□□ -0.53
COL6A2-203ENST00000397763 TRAPPC2LH3BP13 241 aa11.71□□□□□ -0.53
COL6A2-203ENST00000397763 OR4A8P0C604 315 aa11.71□□□□□ -0.53
COL6A2-203ENST00000397763 MLF1P58340 268 aa11.71□□□□□ -0.53
COL6A2-203ENST00000397763 OR8B8Q15620 311 aa11.71□□□□□ -0.53
COL6A2-203ENST00000397763 SNIP1Q8TAD8 396 aaKnown RBP11.71□□□□□ -0.53
COL6A2-203ENST00000397763 SCGB1C1Q8TD33 95 aa11.71□□□□□ -0.53
COL6A2-203ENST00000397763 RBMXL1Q96E39 390 aaKnown RBP11.71□□□□□ -0.53
COL6A2-203ENST00000397763 RBKSQ9H477 322 aa11.71□□□□□ -0.53
COL6A2-203ENST00000397763 A0A1B0GU03 582 aa11.71□□□□□ -0.53
COL6A2-203ENST00000397763 SCGB1D1O95968 90 aa11.71□□□□□ -0.53
COL6A2-203ENST00000397763 CYB5R3P00387 301 aaPredicted RBP11.71□□□□□ -0.53
COL6A2-203ENST00000397763 HBE1P02100 147 aa11.71□□□□□ -0.53
COL6A2-203ENST00000397763 TFF1P04155 84 aa11.71□□□□□ -0.53
COL6A2-203ENST00000397763 F2RP25116 425 aa11.71□□□□□ -0.53
COL6A2-203ENST00000397763 UCP1P25874 307 aa11.71□□□□□ -0.53
COL6A2-203ENST00000397763 JOSD1Q15040 202 aaPredicted RBP11.71□□□□□ -0.53
COL6A2-203ENST00000397763 TMEM183AQ8IXX5 376 aa11.71□□□□□ -0.53
COL6A2-203ENST00000397763 OR13D1Q8NGV5 346 aa11.71□□□□□ -0.53
COL6A2-203ENST00000397763 SMIM7Q9BQ49 75 aa11.71□□□□□ -0.53
COL6A2-203ENST00000397763 C2orf88Q9BSF0 95 aa11.71□□□□□ -0.53
COL6A2-203ENST00000397763 PHF7Q9BWX1 381 aaPredicted RBP11.71□□□□□ -0.53
COL6A2-203ENST00000397763 FUT9Q9Y231 359 aa11.71□□□□□ -0.53
COL6A2-203ENST00000397763 ICE1Q9Y2F5 2266 aa11.71□□□□□ -0.54
COL6A2-203ENST00000397763 UBE2L5PA0A1B0GUS4 154 aa11.71□□□□□ -0.54
COL6A2-203ENST00000397763 TUSC2O75896 110 aa11.71□□□□□ -0.54
COL6A2-203ENST00000397763 IGKV1-39P01597 117 aa11.71□□□□□ -0.54
COL6A2-203ENST00000397763 IGKV1D-39P04432 117 aa11.71□□□□□ -0.54
COL6A2-203ENST00000397763 C16orf82Q7Z2V1 217 aa11.71□□□□□ -0.54
COL6A2-203ENST00000397763 HAPLN4Q86UW8 402 aa11.71□□□□□ -0.54
COL6A2-203ENST00000397763 OR1P1Q8NH06 330 aa11.71□□□□□ -0.54
COL6A2-203ENST00000397763 RCC1LQ96I51 464 aaKnown RBP11.71□□□□□ -0.54
COL6A2-203ENST00000397763 RP1L1Q8IWN7 2480 aaPredicted RBP11.71□□□□□ -0.54
COL6A2-203ENST00000397763 SIRPB1O00241 398 aa11.7□□□□□ -0.54
COL6A2-203ENST00000397763 MRPL33O75394 65 aaKnown RBP11.7□□□□□ -0.54
COL6A2-203ENST00000397763 NAPSAO96009 420 aa11.7□□□□□ -0.54
COL6A2-203ENST00000397763 BCL2P10415 239 aa11.7□□□□□ -0.54
COL6A2-203ENST00000397763 ZNF25P17030 456 aaPredicted RBP11.7□□□□□ -0.54
COL6A2-203ENST00000397763 SRPXP78539 464 aa11.7□□□□□ -0.54
COL6A2-203ENST00000397763 Q0VFX4 171 aa11.7□□□□□ -0.54
COL6A2-203ENST00000397763 BATFQ16520 125 aa11.7□□□□□ -0.54
COL6A2-203ENST00000397763 TCEAL6Q6IPX3 200 aa11.7□□□□□ -0.54
COL6A2-203ENST00000397763 PCSK4Q6UW60 755 aa11.7□□□□□ -0.54
COL6A2-203ENST00000397763 TUSC5Q8IXB3 177 aa11.7□□□□□ -0.54
COL6A2-203ENST00000397763 AGBL5Q8NDL9 886 aa11.7□□□□□ -0.54
COL6A2-203ENST00000397763 PSMF1Q92530 271 aa11.7□□□□□ -0.54
COL6A2-203ENST00000397763 PCGF1Q9BSM1 259 aa11.7□□□□□ -0.54
COL6A2-203ENST00000397763 SLC25A22Q9H936 323 aa11.7□□□□□ -0.54
COL6A2-203ENST00000397763 PSENENQ9NZ42 101 aa11.7□□□□□ -0.54
COL6A2-203ENST00000397763 PPP5D1E7EU14 171 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms