RNA–Protein interactions for RNA: ENST00000397537.2

SMCO1-201, Transcript of single-pass membrane protein with coiled-coil domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO1, Length 1,812 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO1-201ENST00000397537 RSU1Q15404 277 aa5.42□□□□□ -1.54
SMCO1-201ENST00000397537 FAM74A1Q5RGS3 127 aa5.42□□□□□ -1.54
SMCO1-201ENST00000397537 TMEM215Q68D42 235 aa5.42□□□□□ -1.54
SMCO1-201ENST00000397537 Q6ZN92 141 aa5.42□□□□□ -1.54
SMCO1-201ENST00000397537 TMEM86BQ8N661 226 aa5.42□□□□□ -1.54
SMCO1-201ENST00000397537 SYT8Q8NBV8 401 aa5.42□□□□□ -1.54
SMCO1-201ENST00000397537 OR10G9Q8NGN4 311 aa5.42□□□□□ -1.54
SMCO1-201ENST00000397537 OR1P1Q8NH06 330 aa5.42□□□□□ -1.54
SMCO1-201ENST00000397537 OR4S2Q8NH73 311 aa5.42□□□□□ -1.54
SMCO1-201ENST00000397537 ORAOV1Q8WV07 137 aa5.42□□□□□ -1.54
SMCO1-201ENST00000397537 SUCNR1Q9BXA5 334 aa5.42□□□□□ -1.54
SMCO1-201ENST00000397537 FBXL15Q9H469 300 aa5.42□□□□□ -1.54
SMCO1-201ENST00000397537 SLCO1B3Q9NPD5 702 aa5.42□□□□□ -1.54
SMCO1-201ENST00000397537 SLC7A10Q9NS82 523 aa5.42□□□□□ -1.54
SMCO1-201ENST00000397537 OR1A1Q9P1Q5 309 aa5.42□□□□□ -1.54
SMCO1-201ENST00000397537 ZNF257Q9Y2Q1 563 aa5.42□□□□□ -1.54
SMCO1-201ENST00000397537 MYH8P13535 1937 aa5.42□□□□□ -1.54
SMCO1-201ENST00000397537 NFASCO94856 1347 aa5.42□□□□□ -1.54
SMCO1-201ENST00000397537 RALGAPA2Q2PPJ7 1873 aa5.42□□□□□ -1.54
SMCO1-201ENST00000397537 TMEM218A2RU14 115 aa5.41□□□□□ -1.54
SMCO1-201ENST00000397537 TMEM150BA6NC51 233 aa5.41□□□□□ -1.54
SMCO1-201ENST00000397537 D6RAR5 112 aa5.41□□□□□ -1.54
SMCO1-201ENST00000397537 TRAPPC2LH3BP13 241 aa5.41□□□□□ -1.54
SMCO1-201ENST00000397537 GABARAPO95166 117 aa5.41□□□□□ -1.54
SMCO1-201ENST00000397537 TSPOP30536 169 aa5.41□□□□□ -1.54
SMCO1-201ENST00000397537 REG1BP48304 166 aa5.41□□□□□ -1.54
SMCO1-201ENST00000397537 PSG4Q00888 419 aa5.41□□□□□ -1.54
SMCO1-201ENST00000397537 BAXQ07812 192 aa5.41□□□□□ -1.54
SMCO1-201ENST00000397537 CD47Q08722 323 aa5.41□□□□□ -1.54
SMCO1-201ENST00000397537 GAGE5Q13069 117 aa5.41□□□□□ -1.54
SMCO1-201ENST00000397537 GAGE6Q13070 117 aa5.41□□□□□ -1.54
SMCO1-201ENST00000397537 TSNQ15631 228 aaKnown RBP5.41□□□□□ -1.54
SMCO1-201ENST00000397537 PLPPR5Q32ZL2 321 aa5.41□□□□□ -1.54
SMCO1-201ENST00000397537 TCEAL5Q5H9L2 206 aa5.41□□□□□ -1.54
SMCO1-201ENST00000397537 PYY3Q5JQD4 70 aa5.41□□□□□ -1.54
SMCO1-201ENST00000397537 AKR1C8PQ5T2L2 129 aa5.41□□□□□ -1.54
SMCO1-201ENST00000397537 MRGPRGQ86SM5 289 aa5.41□□□□□ -1.54
SMCO1-201ENST00000397537 OR8D4Q8NGM9 314 aa5.41□□□□□ -1.54
SMCO1-201ENST00000397537 SPPL2BQ8TCT7 592 aa5.41□□□□□ -1.54
SMCO1-201ENST00000397537 TNFAIP8L1Q8WVP5 186 aa5.41□□□□□ -1.54
SMCO1-201ENST00000397537 FGF14Q92915 247 aa5.41□□□□□ -1.54
SMCO1-201ENST00000397537 PIK3IP1Q96FE7 263 aa5.41□□□□□ -1.54
SMCO1-201ENST00000397537 RIOK2Q9BVS4 552 aaKnown RBP5.41□□□□□ -1.54
SMCO1-201ENST00000397537 TAPBPLQ9BX59 468 aa5.41□□□□□ -1.54
SMCO1-201ENST00000397537 CHST5Q9GZS9 411 aa5.41□□□□□ -1.54
SMCO1-201ENST00000397537 OCIAD1Q9NX40 245 aa5.41□□□□□ -1.54
SMCO1-201ENST00000397537 COMMD9Q9P000 198 aa5.41□□□□□ -1.54
SMCO1-201ENST00000397537 THYN1Q9P016 225 aa5.41□□□□□ -1.54
SMCO1-201ENST00000397537 NUFIP1Q9UHK0 495 aaKnown RBP5.41□□□□□ -1.54
SMCO1-201ENST00000397537 ANXA10Q9UJ72 324 aa5.41□□□□□ -1.54
SMCO1-201ENST00000397537 SIP14410 1827 aa5.41□□□□□ -1.54
SMCO1-201ENST00000397537 ROBO3Q96MS0 1386 aa5.41□□□□□ -1.54
SMCO1-201ENST00000397537 TEP1Q99973 2627 aaKnown RBP5.41□□□□□ -1.54
SMCO1-201ENST00000397537 ITPR1Q14643 2758 aa5.41□□□□□ -1.54
SMCO1-201ENST00000397537 COL4A3Q01955 1670 aa5.41□□□□□ -1.54
SMCO1-201ENST00000397537 ZNF236Q9UL36 1845 aa5.41□□□□□ -1.54
SMCO1-201ENST00000397537 IGHV3-20A0A0C4DH32 117 aa5.41□□□□□ -1.54
SMCO1-201ENST00000397537 RBMY1BA6NDE4 496 aaKnown RBP5.41□□□□□ -1.54
SMCO1-201ENST00000397537 RBMY1EA6NEQ0 496 aaKnown RBP5.41□□□□□ -1.54
SMCO1-201ENST00000397537 OR5H14A6NHG9 310 aa5.41□□□□□ -1.54
SMCO1-201ENST00000397537 FAM159BA6NKW6 160 aa5.41□□□□□ -1.54
SMCO1-201ENST00000397537 F6UZH7 168 aa5.41□□□□□ -1.54
SMCO1-201ENST00000397537 CDX4O14627 284 aaPredicted RBP5.41□□□□□ -1.54
SMCO1-201ENST00000397537 SLC25A27O95847 323 aa5.41□□□□□ -1.54
SMCO1-201ENST00000397537 GIPP09681 153 aaPredicted RBP5.41□□□□□ -1.54
SMCO1-201ENST00000397537 RBMY1DP0C7P1 496 aaKnown RBP5.41□□□□□ -1.54
SMCO1-201ENST00000397537 RBMY1A1P0DJD3 496 aaKnown RBP5.41□□□□□ -1.54
SMCO1-201ENST00000397537 GPX2P18283 190 aa5.41□□□□□ -1.54
SMCO1-201ENST00000397537 MYL9P24844 172 aa5.41□□□□□ -1.54
SMCO1-201ENST00000397537 PPICP45877 212 aa5.41□□□□□ -1.54
SMCO1-201ENST00000397537 RFX2P48378 723 aa5.41□□□□□ -1.54
SMCO1-201ENST00000397537 SNRPD2P62316 118 aaKnown RBP5.41□□□□□ -1.54
SMCO1-201ENST00000397537 TRMT12Q53H54 448 aaKnown RBP5.41□□□□□ -1.54
SMCO1-201ENST00000397537 ARTNQ5T4W7 220 aa5.41□□□□□ -1.54
SMCO1-201ENST00000397537 ZNF324BQ6AW86 544 aaPredicted RBP5.41□□□□□ -1.54
SMCO1-201ENST00000397537 UBAC2Q8NBM4 344 aa5.41□□□□□ -1.54
SMCO1-201ENST00000397537 C11orf52Q96A22 123 aa5.41□□□□□ -1.54
SMCO1-201ENST00000397537 TBX5Q99593 518 aa5.41□□□□□ -1.54
SMCO1-201ENST00000397537 SNHG12Q9BXW3 62 aa5.41□□□□□ -1.54
SMCO1-201ENST00000397537 PRSS22Q9GZN4 317 aa5.41□□□□□ -1.54
SMCO1-201ENST00000397537 SPHK2Q9NRA0 654 aa5.41□□□□□ -1.54
SMCO1-201ENST00000397537 RBM22Q9NW64 420 aaKnown RBP eCLIP5.41□□□□□ -1.54
SMCO1-201ENST00000397537 SPRR3Q9UBC9 169 aa5.41□□□□□ -1.54
SMCO1-201ENST00000397537 PCYT1BQ9Y5K3 369 aaPredicted RBP5.41□□□□□ -1.54
SMCO1-201ENST00000397537 ASTN1O14525 1302 aa5.41□□□□□ -1.54
SMCO1-201ENST00000397537 DLG5Q8TDM6 1919 aa5.4□□□□□ -1.54
SMCO1-201ENST00000397537 MYO18BQ8IUG5 2567 aa5.4□□□□□ -1.54
SMCO1-201ENST00000397537 ZNF462Q96JM2 2506 aa5.4□□□□□ -1.54
SMCO1-201ENST00000397537 IGLV5-37A0A075B6J1 123 aa5.4□□□□□ -1.54
SMCO1-201ENST00000397537 IGHV1OR21-1A0A087WYE8 117 aa5.4□□□□□ -1.54
SMCO1-201ENST00000397537 IGSF23A1L1A6 192 aa5.4□□□□□ -1.54
SMCO1-201ENST00000397537 TRIM49D1C9J1S8 452 aa5.4□□□□□ -1.54
SMCO1-201ENST00000397537 PPP5D1E7EU14 171 aa5.4□□□□□ -1.54
SMCO1-201ENST00000397537 E9PLD3 99 aa5.4□□□□□ -1.54
SMCO1-201ENST00000397537 PDE6DO43924 150 aa5.4□□□□□ -1.54
SMCO1-201ENST00000397537 GLUD1P00367 558 aa5.4□□□□□ -1.54
SMCO1-201ENST00000397537 PRKACGP22612 351 aa5.4□□□□□ -1.54
SMCO1-201ENST00000397537 CD38P28907 300 aa5.4□□□□□ -1.54
SMCO1-201ENST00000397537 CKS1BP61024 79 aa5.4□□□□□ -1.54
SMCO1-201ENST00000397537 EIF5AP63241 154 aaKnown RBP5.4□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 79 ms