RNA–Protein interactions for RNA: ENST00000396355.5

NDE1-202, Transcript of nudE neurodevelopment protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDE1, Length 3,936 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-202ENST00000396355 HEBP2Q9Y5Z4 205 aa7.35□□□□□ -1.23
NDE1-202ENST00000396355 CENPVL1A0A0U1RR11 272 aa7.35□□□□□ -1.23
NDE1-202ENST00000396355 CD300LBA8K4G0 201 aa7.35□□□□□ -1.23
NDE1-202ENST00000396355 TRDCB7Z8K6 153 aa7.35□□□□□ -1.23
NDE1-202ENST00000396355 NUDT21O43809 227 aaKnown RBP7.35□□□□□ -1.23
NDE1-202ENST00000396355 CSN3P07498 182 aa7.35□□□□□ -1.23
NDE1-202ENST00000396355 PI4KAP42356 2102 aa7.35□□□□□ -1.23
NDE1-202ENST00000396355 TAS2R46P59540 309 aa7.35□□□□□ -1.23
NDE1-202ENST00000396355 MRPS21P82921 87 aaKnown RBP7.35□□□□□ -1.23
NDE1-202ENST00000396355 PRDX1Q06830 199 aaKnown RBP7.35□□□□□ -1.23
NDE1-202ENST00000396355 SLC25A30Q5SVS4 291 aa7.35□□□□□ -1.23
NDE1-202ENST00000396355 GKN2Q86XP6 184 aa7.35□□□□□ -1.23
NDE1-202ENST00000396355 OR1B1Q8NGR6 318 aa7.35□□□□□ -1.23
NDE1-202ENST00000396355 MS4A6EQ96DS6 147 aa7.35□□□□□ -1.23
NDE1-202ENST00000396355 PMCHL2Q9BQD1 86 aa7.35□□□□□ -1.23
NDE1-202ENST00000396355 SF3B5Q9BWJ5 86 aaKnown RBP7.35□□□□□ -1.23
NDE1-202ENST00000396355 WDR76Q9H967 626 aa7.35□□□□□ -1.23
NDE1-202ENST00000396355 FRRS1LQ9P0K9 344 aa7.35□□□□□ -1.23
NDE1-202ENST00000396355 PEF1Q9UBV8 284 aaKnown RBP7.35□□□□□ -1.23
NDE1-202ENST00000396355 MMP17Q9ULZ9 603 aa7.35□□□□□ -1.23
NDE1-202ENST00000396355 PRKNO60260 465 aaPredicted RBP7.34□□□□□ -1.23
NDE1-202ENST00000396355 CHRM2P08172 466 aa7.34□□□□□ -1.23
NDE1-202ENST00000396355 ADH4P08319 380 aa7.34□□□□□ -1.23
NDE1-202ENST00000396355 ZNF708P17019 499 aa7.34□□□□□ -1.23
NDE1-202ENST00000396355 GRB2P62993 217 aaKnown RBP7.34□□□□□ -1.23
NDE1-202ENST00000396355 HGFACQ04756 655 aa7.34□□□□□ -1.23
NDE1-202ENST00000396355 FAM89BQ8N5H3 189 aa7.34□□□□□ -1.23
NDE1-202ENST00000396355 OR5D14Q8NGL3 314 aa7.34□□□□□ -1.23
NDE1-202ENST00000396355 OR1L3Q8NH93 324 aa7.34□□□□□ -1.23
NDE1-202ENST00000396355 PLEKHA3Q9HB20 300 aa7.34□□□□□ -1.23
NDE1-202ENST00000396355 BCL2L10Q9HD36 194 aa7.34□□□□□ -1.23
NDE1-202ENST00000396355 ST6GALNAC1Q9NSC7 600 aaPredicted RBP7.34□□□□□ -1.23
NDE1-202ENST00000396355 TMEM74BQ9NUR3 256 aa7.34□□□□□ -1.23
NDE1-202ENST00000396355 B4GALT7Q9UBV7 327 aa7.34□□□□□ -1.23
NDE1-202ENST00000396355 CES1P1Q9UKY3 287 aa7.34□□□□□ -1.23
NDE1-202ENST00000396355 ICAM5Q9UMF0 924 aa7.34□□□□□ -1.23
NDE1-202ENST00000396355 B9D1Q9UPM9 204 aa7.34□□□□□ -1.23
NDE1-202ENST00000396355 ZBTB32Q9Y2Y4 487 aaPredicted RBP7.34□□□□□ -1.23
NDE1-202ENST00000396355 CREBBPQ92793 2442 aa7.34□□□□□ -1.23
NDE1-202ENST00000396355 AADACP22760 399 aa7.34□□□□□ -1.23
NDE1-202ENST00000396355 PDCD1Q15116 288 aa7.34□□□□□ -1.23
NDE1-202ENST00000396355 SHBQ15464 509 aa7.34□□□□□ -1.23
NDE1-202ENST00000396355 PRR31Q5SQ13 230 aa7.34□□□□□ -1.23
NDE1-202ENST00000396355 TMEM225Q6GV28 225 aa7.34□□□□□ -1.23
NDE1-202ENST00000396355 MRGPREQ86SM8 312 aa7.34□□□□□ -1.23
NDE1-202ENST00000396355 OR4D5Q8NGN0 318 aa7.34□□□□□ -1.23
NDE1-202ENST00000396355 MRPL30Q8TCC3 161 aaKnown RBP7.34□□□□□ -1.23
NDE1-202ENST00000396355 IL1F10Q8WWZ1 152 aa7.34□□□□□ -1.23
NDE1-202ENST00000396355 DIO2Q92813 273 aa7.34□□□□□ -1.23
NDE1-202ENST00000396355 PECRQ9BY49 303 aa7.34□□□□□ -1.23
NDE1-202ENST00000396355 MRPS18AQ9NVS2 196 aaKnown RBP7.34□□□□□ -1.23
NDE1-202ENST00000396355 PILRBQ9UKJ0 227 aa7.34□□□□□ -1.23
NDE1-202ENST00000396355 COL6A6A6NMZ7 2263 aa7.34□□□□□ -1.23
NDE1-202ENST00000396355 DMDP11532 3685 aa7.34□□□□□ -1.23
NDE1-202ENST00000396355 F8VVB4 439 aa7.34□□□□□ -1.23
NDE1-202ENST00000396355 F8VWA3 439 aa7.34□□□□□ -1.23
NDE1-202ENST00000396355 CYR61O00622 381 aa7.34□□□□□ -1.23
NDE1-202ENST00000396355 SH2D1BO14796 132 aa7.34□□□□□ -1.23
NDE1-202ENST00000396355 CLEC3AO75596 197 aa7.34□□□□□ -1.23
NDE1-202ENST00000396355 EWSR1Q01844 656 aaKnown RBP eCLIP7.34□□□□□ -1.23
NDE1-202ENST00000396355 ZIC1Q15915 447 aa7.34□□□□□ -1.23
NDE1-202ENST00000396355 PRSS8Q16651 343 aa7.34□□□□□ -1.23
NDE1-202ENST00000396355 WDR38Q5JTN6 314 aa7.34□□□□□ -1.23
NDE1-202ENST00000396355 C10orf91Q5T1B1 145 aa7.34□□□□□ -1.23
NDE1-202ENST00000396355 NKAIN3Q8N8D7 197 aa7.34□□□□□ -1.23
NDE1-202ENST00000396355 OR2T6Q8NHC8 308 aa7.34□□□□□ -1.23
NDE1-202ENST00000396355 RNF128Q8TEB7 428 aa7.34□□□□□ -1.23
NDE1-202ENST00000396355 PERPQ96FX8 193 aa7.34□□□□□ -1.23
NDE1-202ENST00000396355 SCARF2Q96GP6 870 aaPredicted RBP7.34□□□□□ -1.23
NDE1-202ENST00000396355 LOC107986453A0A1B0GWG9 222 aa7.33□□□□□ -1.24
NDE1-202ENST00000396355 PRR19A6NJB7 356 aa7.33□□□□□ -1.24
NDE1-202ENST00000396355 CHEK1O14757 476 aa7.33□□□□□ -1.24
NDE1-202ENST00000396355 PAGE4O60829 102 aa7.33□□□□□ -1.24
NDE1-202ENST00000396355 HSPB1P04792 205 aaKnown RBP7.33□□□□□ -1.24
NDE1-202ENST00000396355 ZNF506Q5JVG8 444 aa7.33□□□□□ -1.24
NDE1-202ENST00000396355 PMS2CLQ68D20 193 aa7.33□□□□□ -1.24
NDE1-202ENST00000396355 ABHD17CQ6PCB6 329 aa7.33□□□□□ -1.24
NDE1-202ENST00000396355 ATG4DQ86TL0 474 aaPredicted RBP7.33□□□□□ -1.24
NDE1-202ENST00000396355 CCDC71LQ8N9Z2 235 aa7.33□□□□□ -1.24
NDE1-202ENST00000396355 RCBTB1Q8NDN9 531 aa7.33□□□□□ -1.24
NDE1-202ENST00000396355 ARHGAP5-AS1Q96IT6 56 aa7.33□□□□□ -1.24
NDE1-202ENST00000396355 UHRF2Q96PU4 802 aa7.33□□□□□ -1.24
NDE1-202ENST00000396355 ANAPC13Q9BS18 74 aa7.33□□□□□ -1.24
NDE1-202ENST00000396355 NRASP01111 189 aa7.33□□□□□ -1.24
NDE1-202ENST00000396355 KRASP01116 189 aa7.33□□□□□ -1.24
NDE1-202ENST00000396355 BCL2P10415 239 aa7.33□□□□□ -1.24
NDE1-202ENST00000396355 ESDP10768 282 aa7.33□□□□□ -1.24
NDE1-202ENST00000396355 TCN2P20062 427 aa7.33□□□□□ -1.24
NDE1-202ENST00000396355 FUT6P51993 359 aa7.33□□□□□ -1.24
NDE1-202ENST00000396355 C12orf54Q6X4T0 127 aa7.33□□□□□ -1.24
NDE1-202ENST00000396355 BPIFA4PQ86YQ2 179 aa7.33□□□□□ -1.24
NDE1-202ENST00000396355 GPHA2Q96T91 129 aa7.33□□□□□ -1.24
NDE1-202ENST00000396355 RBM24Q9BX46 236 aaKnown RBP7.33□□□□□ -1.24
NDE1-202ENST00000396355 CHRNA10Q9GZZ6 450 aa7.33□□□□□ -1.24
NDE1-202ENST00000396355 MRPL18Q9H0U6 180 aaKnown RBP7.33□□□□□ -1.24
NDE1-202ENST00000396355 FLRT3Q9NZU0 649 aa7.33□□□□□ -1.24
NDE1-202ENST00000396355 SPCS1Q9Y6A9 102 aa7.33□□□□□ -1.24
NDE1-202ENST00000396355 ARHGEF17Q96PE2 2063 aaPredicted RBP7.33□□□□□ -1.24
NDE1-202ENST00000396355 LOC105371242A0A075B767 164 aa7.33□□□□□ -1.24
NDE1-202ENST00000396355 PPIAL4CA0A0B4J2A2 164 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 204.1 ms