RNA–Protein interactions for RNA: ENST00000396082.2

UPK3A-202, Transcript of uroplakin 3A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene UPK3A, Length 627 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3A-202ENST00000396082 NBEAL1Q6ZS30 2694 aa13.98□□□□□ -0.17
UPK3A-202ENST00000396082 IGKV1D-33P01593 117 aa13.97□□□□□ -0.17
UPK3A-202ENST00000396082 IGKV1-33P01594 117 aa13.97□□□□□ -0.17
UPK3A-202ENST00000396082 ZNF816Q0VGE8 651 aaPredicted RBP13.97□□□□□ -0.17
UPK3A-202ENST00000396082 HNF4GQ14541 408 aa13.97□□□□□ -0.17
UPK3A-202ENST00000396082 HES5Q5TA89 166 aa13.97□□□□□ -0.17
UPK3A-202ENST00000396082 HIST2H2BDQ6DRA6 164 aa13.97□□□□□ -0.17
UPK3A-202ENST00000396082 ZNF554Q86TJ5 538 aa13.97□□□□□ -0.17
UPK3A-202ENST00000396082 OR51D1Q8NGF3 324 aa13.97□□□□□ -0.17
UPK3A-202ENST00000396082 FAM110DQ8TAY7 271 aaPredicted RBP13.97□□□□□ -0.17
UPK3A-202ENST00000396082 CFHR4Q92496 578 aa13.97□□□□□ -0.17
UPK3A-202ENST00000396082 FCGR1BQ92637 280 aa13.97□□□□□ -0.17
UPK3A-202ENST00000396082 FAM3DQ96BQ1 224 aa13.97□□□□□ -0.17
UPK3A-202ENST00000396082 YTHDF1Q9BYJ9 559 aaKnown RBP13.97□□□□□ -0.17
UPK3A-202ENST00000396082 LPAR5Q9H1C0 372 aa13.97□□□□□ -0.17
UPK3A-202ENST00000396082 ABRACLQ9P1F3 81 aa13.97□□□□□ -0.17
UPK3A-202ENST00000396082 RRP15Q9Y3B9 282 aaKnown RBP13.97□□□□□ -0.17
UPK3A-202ENST00000396082 MGAM2Q2M2H8 2515 aa13.96□□□□□ -0.17
UPK3A-202ENST00000396082 IGHV1-3A0A0C4DH29 117 aa13.96□□□□□ -0.17
UPK3A-202ENST00000396082 SH2D7A6NKC9 451 aaPredicted RBP13.96□□□□□ -0.17
UPK3A-202ENST00000396082 FAM90A9PA6NNJ1 464 aa13.96□□□□□ -0.17
UPK3A-202ENST00000396082 SLC31A2O15432 143 aa13.96□□□□□ -0.17
UPK3A-202ENST00000396082 UBE2UQ5VVX9 321 aa13.96□□□□□ -0.17
UPK3A-202ENST00000396082 SLC25A48Q6ZT89 311 aaKnown RBP13.96□□□□□ -0.17
UPK3A-202ENST00000396082 SPARTQ8N0X7 666 aa13.96□□□□□ -0.17
UPK3A-202ENST00000396082 ZNF439Q8NDP4 499 aa13.96□□□□□ -0.17
UPK3A-202ENST00000396082 GALMQ96C23 342 aa13.96□□□□□ -0.17
UPK3A-202ENST00000396082 STEAP1Q9UHE8 339 aa13.96□□□□□ -0.17
UPK3A-202ENST00000396082 JPT1Q9UK76 154 aa13.96□□□□□ -0.17
UPK3A-202ENST00000396082 WNK1Q9H4A3 2382 aa13.95□□□□□ -0.18
UPK3A-202ENST00000396082 A0A0A6YYD4 124 aa13.95□□□□□ -0.18
UPK3A-202ENST00000396082 IGHV3-72A0A0B4J1Y9 119 aa13.95□□□□□ -0.18
UPK3A-202ENST00000396082 TRDV1A0A1B0GX56 115 aa13.95□□□□□ -0.18
UPK3A-202ENST00000396082 SOCS1O15524 211 aa13.95□□□□□ -0.18
UPK3A-202ENST00000396082 TXNL1O43396 289 aa13.95□□□□□ -0.18
UPK3A-202ENST00000396082 RGS11O94810 467 aa13.95□□□□□ -0.18
UPK3A-202ENST00000396082 CD28P10747 220 aa13.95□□□□□ -0.18
UPK3A-202ENST00000396082 VEGFCP49767 419 aa13.95□□□□□ -0.18
UPK3A-202ENST00000396082 NSUN5P1Q3KNT7 163 aa13.95□□□□□ -0.18
UPK3A-202ENST00000396082 MOB1BQ7L9L4 216 aa13.95□□□□□ -0.18
UPK3A-202ENST00000396082 TGIF2LXQ8IUE1 241 aa13.95□□□□□ -0.18
UPK3A-202ENST00000396082 LYG1Q8N1E2 194 aa13.95□□□□□ -0.18
UPK3A-202ENST00000396082 OR52L2PQ8NGH6 319 aa13.95□□□□□ -0.18
UPK3A-202ENST00000396082 IL1F10Q8WWZ1 152 aa13.95□□□□□ -0.18
UPK3A-202ENST00000396082 WNT10AQ9GZT5 417 aa13.95□□□□□ -0.18
UPK3A-202ENST00000396082 LRRC42Q9Y546 428 aa13.95□□□□□ -0.18
UPK3A-202ENST00000396082 TRAV1-2A0A0B4J238 106 aa13.94□□□□□ -0.18
UPK3A-202ENST00000396082 PPP1CCP36873 323 aaKnown RBP13.94□□□□□ -0.18
UPK3A-202ENST00000396082 OR10A3P58181 314 aa13.94□□□□□ -0.18
UPK3A-202ENST00000396082 GNMTQ14749 295 aa13.94□□□□□ -0.18
UPK3A-202ENST00000396082 HMGN3Q15651 99 aa13.94□□□□□ -0.18
UPK3A-202ENST00000396082 C2orf76Q3KRA6 126 aa13.94□□□□□ -0.18
UPK3A-202ENST00000396082 MORN2Q502X0 79 aa13.94□□□□□ -0.18
UPK3A-202ENST00000396082 CT45A1Q5HYN5 189 aa13.94□□□□□ -0.18
UPK3A-202ENST00000396082 C22orf42Q6IC83 251 aa13.94□□□□□ -0.18
UPK3A-202ENST00000396082 CD200R1LQ6Q8B3 271 aa13.94□□□□□ -0.18
UPK3A-202ENST00000396082 CENPVQ7Z7K6 275 aaPredicted RBP13.94□□□□□ -0.18
UPK3A-202ENST00000396082 OR5AU1Q8NGC0 362 aa13.94□□□□□ -0.18
UPK3A-202ENST00000396082 OR56B1Q8NGI3 324 aa13.94□□□□□ -0.18
UPK3A-202ENST00000396082 CT45A3Q8NHU0 189 aa13.94□□□□□ -0.18
UPK3A-202ENST00000396082 RTN4IP1Q8WWV3 396 aaPredicted RBP13.94□□□□□ -0.18
UPK3A-202ENST00000396082 ABHD14AQ9BUJ0 271 aa13.94□□□□□ -0.18
UPK3A-202ENST00000396082 RIMS4Q9H426 269 aaPredicted RBP13.94□□□□□ -0.18
UPK3A-202ENST00000396082 AK3Q9UIJ7 227 aa13.94□□□□□ -0.18
UPK3A-202ENST00000396082 AMY1AP04745 511 aa13.93□□□□□ -0.18
UPK3A-202ENST00000396082 AMY2AP04746 511 aa13.93□□□□□ -0.18
UPK3A-202ENST00000396082 RAB3BP20337 219 aa13.93□□□□□ -0.18
UPK3A-202ENST00000396082 GALP22466 123 aa13.93□□□□□ -0.18
UPK3A-202ENST00000396082 ZNF134P52741 427 aa13.93□□□□□ -0.18
UPK3A-202ENST00000396082 HTD2P86397 168 aa13.93□□□□□ -0.18
UPK3A-202ENST00000396082 STEAP3Q658P3 488 aa13.93□□□□□ -0.18
UPK3A-202ENST00000396082 ZNF773Q6PK81 442 aa13.93□□□□□ -0.18
UPK3A-202ENST00000396082 C5orf24Q7Z6I8 188 aa13.93□□□□□ -0.18
UPK3A-202ENST00000396082 IZUMO1Q8IYV9 350 aa13.93□□□□□ -0.18
UPK3A-202ENST00000396082 FAM89BQ8N5H3 189 aa13.93□□□□□ -0.18
UPK3A-202ENST00000396082 OR2T10Q8NGZ9 312 aa13.93□□□□□ -0.18
UPK3A-202ENST00000396082 ST6GALNAC6Q969X2 333 aa13.93□□□□□ -0.18
UPK3A-202ENST00000396082 CITED2Q99967 270 aaPredicted RBP13.93□□□□□ -0.18
UPK3A-202ENST00000396082 HSF4Q9ULV5 492 aa13.93□□□□□ -0.18
UPK3A-202ENST00000396082 TMEM272A0A1B0GTI8 110 aa13.92□□□□□ -0.18
UPK3A-202ENST00000396082 SHISA3A0PJX4 238 aa13.92□□□□□ -0.18
UPK3A-202ENST00000396082 NCBP2LA6PVI3 153 aaKnown RBP13.92□□□□□ -0.18
UPK3A-202ENST00000396082 FGF16O43320 207 aa13.92□□□□□ -0.18
UPK3A-202ENST00000396082 YPEL1O60688 119 aa13.92□□□□□ -0.18
UPK3A-202ENST00000396082 NAPSAO96009 420 aa13.92□□□□□ -0.18
UPK3A-202ENST00000396082 ZNF137PP52743 207 aa13.92□□□□□ -0.18
UPK3A-202ENST00000396082 MRPS15P82914 257 aaKnown RBP13.92□□□□□ -0.18
UPK3A-202ENST00000396082 NDUFA11Q86Y39 141 aa13.92□□□□□ -0.18
UPK3A-202ENST00000396082 C5orf56Q8N8D9 126 aa13.92□□□□□ -0.18
UPK3A-202ENST00000396082 OR2AK2Q8NG84 335 aa13.92□□□□□ -0.18
UPK3A-202ENST00000396082 ARHGAP5-AS1Q96IT6 56 aa13.92□□□□□ -0.18
UPK3A-202ENST00000396082 EAF1Q96JC9 268 aaPredicted RBP13.92□□□□□ -0.18
UPK3A-202ENST00000396082 YPEL2Q96QA6 119 aa13.92□□□□□ -0.18
UPK3A-202ENST00000396082 CMSS1Q9BQ75 279 aaKnown RBP13.92□□□□□ -0.18
UPK3A-202ENST00000396082 HDHD3Q9BSH5 251 aaPredicted RBP13.92□□□□□ -0.18
UPK3A-202ENST00000396082 C12orf4Q9NQ89 552 aa13.92□□□□□ -0.18
UPK3A-202ENST00000396082 RAB22AQ9UL26 194 aa13.92□□□□□ -0.18
UPK3A-202ENST00000396082 STUB1Q9UNE7 303 aa13.92□□□□□ -0.18
UPK3A-202ENST00000396082 TRRAPQ9Y4A5 3859 aa13.91□□□□□ -0.18
UPK3A-202ENST00000396082 IFITM5A6NNB3 132 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms