RNA–Protein interactions for RNA: ENST00000395802.7

VAPB-202, Transcript of VAMP associated protein B and C, humanhuman

TSL 1 (best) BASIC

Gene VAPB, Length 1,834 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-202ENST00000395802 UCP3P55916 312 aa11.32□□□□□ -0.6
VAPB-202ENST00000395802 TAS2R31P59538 309 aa11.32□□□□□ -0.6
VAPB-202ENST00000395802 HERPUD1Q15011 391 aa11.32□□□□□ -0.6
VAPB-202ENST00000395802 SLC38A6Q8IZM9 456 aa11.32□□□□□ -0.6
VAPB-202ENST00000395802 FAM185AQ8N0U4 392 aa11.32□□□□□ -0.6
VAPB-202ENST00000395802 OR52M1Q8NGK5 317 aa11.32□□□□□ -0.6
VAPB-202ENST00000395802 NRGNQ92686 78 aa11.32□□□□□ -0.6
VAPB-202ENST00000395802 MOB3AQ96BX8 217 aa11.32□□□□□ -0.6
VAPB-202ENST00000395802 ZNF486Q96H40 463 aaPredicted RBP11.32□□□□□ -0.6
VAPB-202ENST00000395802 SEC22CQ9BRL7 303 aa11.32□□□□□ -0.6
VAPB-202ENST00000395802 TOLLIPQ9H0E2 274 aa11.32□□□□□ -0.6
VAPB-202ENST00000395802 ALX4Q9H161 411 aaPredicted RBP11.32□□□□□ -0.6
VAPB-202ENST00000395802 GNG12Q9UBI6 72 aa11.32□□□□□ -0.6
VAPB-202ENST00000395802 C14orf166Q9Y224 244 aaKnown RBP11.32□□□□□ -0.6
VAPB-202ENST00000395802 ARID1AO14497 2285 aa11.32□□□□□ -0.6
VAPB-202ENST00000395802 IGKV1-6A0A0C4DH72 117 aa11.31□□□□□ -0.6
VAPB-202ENST00000395802 A8MV72 311 aaPredicted RBP11.31□□□□□ -0.6
VAPB-202ENST00000395802 ZNF728P0DKX0 622 aa11.31□□□□□ -0.6
VAPB-202ENST00000395802 CGB3P0DN86 165 aa11.31□□□□□ -0.6
VAPB-202ENST00000395802 CGB7P0DN87 165 aa11.31□□□□□ -0.6
VAPB-202ENST00000395802 NFYAP23511 347 aaPredicted RBP11.31□□□□□ -0.6
VAPB-202ENST00000395802 AADACL3Q5VUY0 350 aa11.31□□□□□ -0.6
VAPB-202ENST00000395802 ZNF626Q68DY1 528 aa11.31□□□□□ -0.6
VAPB-202ENST00000395802 TMEM200BQ69YZ2 307 aa11.31□□□□□ -0.6
VAPB-202ENST00000395802 H1FOOQ8IZA3 346 aaPredicted RBP11.31□□□□□ -0.6
VAPB-202ENST00000395802 OR1L1Q8NH94 360 aa11.31□□□□□ -0.6
VAPB-202ENST00000395802 C8orf46Q8TAG6 207 aa11.31□□□□□ -0.6
VAPB-202ENST00000395802 MED28Q9H204 178 aa11.31□□□□□ -0.6
VAPB-202ENST00000395802 C19orf12Q9NSK7 152 aa11.31□□□□□ -0.6
VAPB-202ENST00000395802 RDH8Q9NYR8 311 aa11.31□□□□□ -0.6
VAPB-202ENST00000395802 VSIG4Q9Y279 399 aa11.31□□□□□ -0.6
VAPB-202ENST00000395802 RBM7Q9Y580 266 aaKnown RBP11.31□□□□□ -0.6
VAPB-202ENST00000395802 FASNP49327 2511 aaKnown RBP11.31□□□□□ -0.6
VAPB-202ENST00000395802 CELSR2Q9HCU4 2923 aa11.3□□□□□ -0.6
VAPB-202ENST00000395802 OR5H14A6NHG9 310 aa11.3□□□□□ -0.6
VAPB-202ENST00000395802 SNRPGP15A8MWD9 76 aa11.3□□□□□ -0.6
VAPB-202ENST00000395802 TUSC2O75896 110 aa11.3□□□□□ -0.6
VAPB-202ENST00000395802 SLC22A5O76082 557 aa11.3□□□□□ -0.6
VAPB-202ENST00000395802 IGHV2-5P01817 119 aa11.3□□□□□ -0.6
VAPB-202ENST00000395802 RBP4P02753 201 aa11.3□□□□□ -0.6
VAPB-202ENST00000395802 LIPFP07098 398 aa11.3□□□□□ -0.6
VAPB-202ENST00000395802 PGAM2P15259 253 aa11.3□□□□□ -0.6
VAPB-202ENST00000395802 LUMP51884 338 aaPredicted RBP11.3□□□□□ -0.6
VAPB-202ENST00000395802 UBE2MP61081 183 aaKnown RBP11.3□□□□□ -0.6
VAPB-202ENST00000395802 FCN2Q15485 313 aa11.3□□□□□ -0.6
VAPB-202ENST00000395802 CLEC12BQ2HXU8 276 aa11.3□□□□□ -0.6
VAPB-202ENST00000395802 FAHD2BQ6P2I3 314 aaPredicted RBP11.3□□□□□ -0.6
VAPB-202ENST00000395802 HEPN1Q6WQI6 88 aa11.3□□□□□ -0.6
VAPB-202ENST00000395802 CMTM1Q8IZ96 169 aa11.3□□□□□ -0.6
VAPB-202ENST00000395802 OR11H7Q8NGC8 314 aa11.3□□□□□ -0.6
VAPB-202ENST00000395802 DACT3Q96B18 629 aaPredicted RBP11.3□□□□□ -0.6
VAPB-202ENST00000395802 FAHD2AQ96GK7 314 aa11.3□□□□□ -0.6
VAPB-202ENST00000395802 NARFLQ9H6Q4 476 aa11.3□□□□□ -0.6
VAPB-202ENST00000395802 GPN1Q9HCN4 374 aaPredicted RBP11.3□□□□□ -0.6
VAPB-202ENST00000395802 RANGRFQ9HD47 186 aaPredicted RBP11.3□□□□□ -0.6
VAPB-202ENST00000395802 IDI2-AS1Q9NZ38 188 aa11.3□□□□□ -0.6
VAPB-202ENST00000395802 RPUSD1Q9UJJ7 312 aaKnown RBP11.3□□□□□ -0.6
VAPB-202ENST00000395802 LOC105371242A0A075B767 164 aa11.3□□□□□ -0.6
VAPB-202ENST00000395802 PPIAL4CA0A0B4J2A2 164 aa11.3□□□□□ -0.6
VAPB-202ENST00000395802 VWC2LB2RUY7 222 aa11.3□□□□□ -0.6
VAPB-202ENST00000395802 YPEL1O60688 119 aa11.3□□□□□ -0.6
VAPB-202ENST00000395802 FOXH1O75593 365 aa11.3□□□□□ -0.6
VAPB-202ENST00000395802 PPIAL4GP0DN37 164 aa11.3□□□□□ -0.6
VAPB-202ENST00000395802 AADACP22760 399 aa11.3□□□□□ -0.6
VAPB-202ENST00000395802 FXYD4P59646 89 aa11.3□□□□□ -0.6
VAPB-202ENST00000395802 KRTAP10-9P60411 292 aa11.3□□□□□ -0.6
VAPB-202ENST00000395802 CD83Q01151 205 aa11.3□□□□□ -0.6
VAPB-202ENST00000395802 C17orf58Q2M2W7 97 aa11.3□□□□□ -0.6
VAPB-202ENST00000395802 Q3ZCU0 254 aa11.3□□□□□ -0.6
VAPB-202ENST00000395802 ABCA11PQ4W5N1 156 aa11.3□□□□□ -0.6
VAPB-202ENST00000395802 LY6G6FQ5SQ64 297 aa11.3□□□□□ -0.6
VAPB-202ENST00000395802 PRSS57Q6UWY2 283 aa11.3□□□□□ -0.6
VAPB-202ENST00000395802 RFESDQ8TAC1 157 aa11.3□□□□□ -0.6
VAPB-202ENST00000395802 MARCH1Q8TCQ1 289 aa11.3□□□□□ -0.6
VAPB-202ENST00000395802 CAPSLQ8WWF8 208 aa11.3□□□□□ -0.6
VAPB-202ENST00000395802 YPEL2Q96QA6 119 aa11.3□□□□□ -0.6
VAPB-202ENST00000395802 FYTTD1Q96QD9 318 aaKnown RBP11.3□□□□□ -0.6
VAPB-202ENST00000395802 GPR132Q9UNW8 380 aa11.3□□□□□ -0.6
VAPB-202ENST00000395802 KIAA2026Q5HYC2 2103 aa11.29□□□□□ -0.6
VAPB-202ENST00000395802 ITGB1BP1O14713 200 aa11.29□□□□□ -0.6
VAPB-202ENST00000395802 CREBL2O60519 120 aaPredicted RBP11.29□□□□□ -0.6
VAPB-202ENST00000395802 CTSDP07339 412 aaPredicted RBP11.29□□□□□ -0.6
VAPB-202ENST00000395802 RAB7AP51149 207 aa11.29□□□□□ -0.6
VAPB-202ENST00000395802 ZNF273Q14593 569 aa11.29□□□□□ -0.6
VAPB-202ENST00000395802 TMED4Q7Z7H5 227 aa11.29□□□□□ -0.6
VAPB-202ENST00000395802 CCDC71LQ8N9Z2 235 aa11.29□□□□□ -0.6
VAPB-202ENST00000395802 OR2AK2Q8NG84 335 aa11.29□□□□□ -0.6
VAPB-202ENST00000395802 OR10V1Q8NGI7 309 aa11.29□□□□□ -0.6
VAPB-202ENST00000395802 OR52B4Q8NGK2 314 aa11.29□□□□□ -0.6
VAPB-202ENST00000395802 CLDND2Q8NHS1 167 aa11.29□□□□□ -0.6
VAPB-202ENST00000395802 TOMM40LQ969M1 308 aa11.29□□□□□ -0.6
VAPB-202ENST00000395802 AKR1E2Q96JD6 320 aa11.29□□□□□ -0.6
VAPB-202ENST00000395802 TMPRSS13Q9BYE2 586 aa11.29□□□□□ -0.6
VAPB-202ENST00000395802 A8MXK9 166 aa11.28□□□□□ -0.6
VAPB-202ENST00000395802 ENSAO43768 121 aaKnown RBP11.28□□□□□ -0.6
VAPB-202ENST00000395802 OR4E1P0C645 316 aa11.28□□□□□ -0.6
VAPB-202ENST00000395802 SULT1A3P0DMM9 295 aa11.28□□□□□ -0.6
VAPB-202ENST00000395802 SULT1A4P0DMN0 295 aa11.28□□□□□ -0.6
VAPB-202ENST00000395802 CXCL3P19876 107 aa11.28□□□□□ -0.6
VAPB-202ENST00000395802 EIF2B2P49770 351 aaKnown RBP11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 126 ms