RNA–Protein interactions for RNA: ENST00000392449.4

PTPRK-208, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 2

Gene PTPRK, Length 1,456 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-208ENST00000392449 ZFP57Q9NU63 452 aa13.02□□□□□ -0.33
PTPRK-208ENST00000392449 MYL12BO14950 172 aa13.01□□□□□ -0.33
PTPRK-208ENST00000392449 SLC2A2P11168 524 aaPredicted RBP13.01□□□□□ -0.33
PTPRK-208ENST00000392449 GP2P55259 537 aaKnown RBP13.01□□□□□ -0.33
PTPRK-208ENST00000392449 WNT4P56705 351 aa13.01□□□□□ -0.33
PTPRK-208ENST00000392449 TAS2R43P59537 309 aa13.01□□□□□ -0.33
PTPRK-208ENST00000392449 C6orf183Q5T699 404 aa13.01□□□□□ -0.33
PTPRK-208ENST00000392449 OR10K2Q6IF99 312 aa13.01□□□□□ -0.33
PTPRK-208ENST00000392449 FAM71E2Q8N5Q1 922 aa13.01□□□□□ -0.33
PTPRK-208ENST00000392449 MRPS24Q96EL2 167 aaKnown RBP13.01□□□□□ -0.33
PTPRK-208ENST00000392449 RASL11BQ9BPW5 248 aa13.01□□□□□ -0.33
PTPRK-208ENST00000392449 DCLRE1BQ9H816 532 aa13.01□□□□□ -0.33
PTPRK-208ENST00000392449 OR2S2Q9NQN1 319 aa13.01□□□□□ -0.33
PTPRK-208ENST00000392449 CNOT2Q9NZN8 540 aaKnown RBP13.01□□□□□ -0.33
PTPRK-208ENST00000392449 SC5DO75845 299 aa13□□□□□ -0.33
PTPRK-208ENST00000392449 FUT3P21217 361 aa13□□□□□ -0.33
PTPRK-208ENST00000392449 MYF6P23409 242 aa13□□□□□ -0.33
PTPRK-208ENST00000392449 PPP1CCP36873 323 aaKnown RBP13□□□□□ -0.33
PTPRK-208ENST00000392449 MYCNOSP40205 109 aa13□□□□□ -0.33
PTPRK-208ENST00000392449 ZNF137PP52743 207 aa13□□□□□ -0.33
PTPRK-208ENST00000392449 PNLIPRP3Q17RR3 467 aa13□□□□□ -0.33
PTPRK-208ENST00000392449 NKAPLQ5M9Q1 402 aa13□□□□□ -0.33
PTPRK-208ENST00000392449 TEX38Q6PEX7 206 aa13□□□□□ -0.33
PTPRK-208ENST00000392449 NANOGP1Q8N7R0 232 aa13□□□□□ -0.33
PTPRK-208ENST00000392449 MRPL30Q8TCC3 161 aaKnown RBP13□□□□□ -0.33
PTPRK-208ENST00000392449 FBLIM1Q8WUP2 373 aa13□□□□□ -0.33
PTPRK-208ENST00000392449 RITA1Q96K30 269 aa13□□□□□ -0.33
PTPRK-208ENST00000392449 CCL24O00175 119 aa12.99□□□□□ -0.33
PTPRK-208ENST00000392449 PDCD6O75340 191 aa12.99□□□□□ -0.33
PTPRK-208ENST00000392449 CNTFRP26992 372 aa12.99□□□□□ -0.33
PTPRK-208ENST00000392449 LUMP51884 338 aaPredicted RBP12.99□□□□□ -0.33
PTPRK-208ENST00000392449 LSAMPQ13449 338 aa12.99□□□□□ -0.33
PTPRK-208ENST00000392449 GPR50Q13585 617 aa12.99□□□□□ -0.33
PTPRK-208ENST00000392449 Q3ZCU0 254 aa12.99□□□□□ -0.33
PTPRK-208ENST00000392449 MORN2Q502X0 79 aa12.99□□□□□ -0.33
PTPRK-208ENST00000392449 COMMD1Q8N668 190 aa12.99□□□□□ -0.33
PTPRK-208ENST00000392449 MRPL20Q9BYC9 149 aaKnown RBP12.99□□□□□ -0.33
PTPRK-208ENST00000392449 MBNL3Q9NUK0 354 aaKnown RBP12.99□□□□□ -0.33
PTPRK-208ENST00000392449 ANKRD65E5RJM6 399 aa12.98□□□□□ -0.33
PTPRK-208ENST00000392449 CFHR3Q02985 330 aa12.98□□□□□ -0.33
PTPRK-208ENST00000392449 OGFRL1Q5TC84 451 aaPredicted RBP12.98□□□□□ -0.33
PTPRK-208ENST00000392449 CDH26Q8IXH8 852 aa12.98□□□□□ -0.33
PTPRK-208ENST00000392449 ODF3L1Q8IXM7 274 aa12.98□□□□□ -0.33
PTPRK-208ENST00000392449 DPF1Q92782 380 aa12.98□□□□□ -0.33
PTPRK-208ENST00000392449 SULT4A1Q9BR01 284 aa12.98□□□□□ -0.33
PTPRK-208ENST00000392449 TMED9Q9BVK6 235 aa12.98□□□□□ -0.33
PTPRK-208ENST00000392449 C8orf4Q9NR00 106 aa12.98□□□□□ -0.33
PTPRK-208ENST00000392449 FKBP14Q9NWM8 211 aa12.98□□□□□ -0.33
PTPRK-208ENST00000392449 FAM90A10PA6NDY2 464 aa12.97□□□□□ -0.33
PTPRK-208ENST00000392449 FAM90A7PA6NKC0 464 aa12.97□□□□□ -0.33
PTPRK-208ENST00000392449 FAM90A23PA8MXZ1 464 aa12.97□□□□□ -0.33
PTPRK-208ENST00000392449 H0YHG0 523 aa12.97□□□□□ -0.33
PTPRK-208ENST00000392449 TXNL1O43396 289 aa12.97□□□□□ -0.33
PTPRK-208ENST00000392449 SOX6P35712 828 aa12.97□□□□□ -0.33
PTPRK-208ENST00000392449 OR3A3P47888 321 aa12.97□□□□□ -0.33
PTPRK-208ENST00000392449 GABPB1Q06547 395 aaPredicted RBP12.97□□□□□ -0.33
PTPRK-208ENST00000392449 ACSM3Q53FZ2 586 aa12.97□□□□□ -0.33
PTPRK-208ENST00000392449 CXorf66Q5JRM2 361 aaPredicted RBP12.97□□□□□ -0.33
PTPRK-208ENST00000392449 VAX1Q5SQQ9 334 aa12.97□□□□□ -0.33
PTPRK-208ENST00000392449 C6orf141Q5SZD1 244 aa12.97□□□□□ -0.33
PTPRK-208ENST00000392449 TRAT1Q6PIZ9 186 aa12.97□□□□□ -0.33
PTPRK-208ENST00000392449 LRRTM1Q86UE6 522 aa12.97□□□□□ -0.33
PTPRK-208ENST00000392449 NKAIN3Q8N8D7 197 aa12.97□□□□□ -0.33
PTPRK-208ENST00000392449 UQCC2Q9BRT2 126 aa12.97□□□□□ -0.33
PTPRK-208ENST00000392449 ABHD14AQ9BUJ0 271 aa12.97□□□□□ -0.33
PTPRK-208ENST00000392449 PLCXD1Q9NUJ7 323 aa12.97□□□□□ -0.33
PTPRK-208ENST00000392449 LANCL1O43813 399 aa12.97□□□□□ -0.33
PTPRK-208ENST00000392449 CD1AP06126 327 aa12.97□□□□□ -0.33
PTPRK-208ENST00000392449 VSIG8P0DPA2 414 aa12.97□□□□□ -0.33
PTPRK-208ENST00000392449 CHATP28329 748 aa12.97□□□□□ -0.33
PTPRK-208ENST00000392449 SLC6A1P30531 599 aa12.97□□□□□ -0.33
PTPRK-208ENST00000392449 FOXE3Q13461 319 aa12.97□□□□□ -0.33
PTPRK-208ENST00000392449 MMDQ15546 238 aa12.97□□□□□ -0.33
PTPRK-208ENST00000392449 TMEM30BQ3MIR4 351 aa12.97□□□□□ -0.33
PTPRK-208ENST00000392449 C6orf201Q7Z4U5 140 aa12.97□□□□□ -0.33
PTPRK-208ENST00000392449 KCTD7Q96MP8 289 aa12.97□□□□□ -0.33
PTPRK-208ENST00000392449 NICN1Q9BSH3 213 aa12.97□□□□□ -0.33
PTPRK-208ENST00000392449 FAAP24Q9BTP7 215 aa12.97□□□□□ -0.33
PTPRK-208ENST00000392449 KCNIP1Q9NZI2 227 aa12.97□□□□□ -0.33
PTPRK-208ENST00000392449 ZNF107Q9UII5 783 aaPredicted RBP12.97□□□□□ -0.33
PTPRK-208ENST00000392449 ERGIC3Q9Y282 383 aa12.97□□□□□ -0.33
PTPRK-208ENST00000392449 KMT2CQ8NEZ4 4911 aaKnown RBP12.96□□□□□ -0.33
PTPRK-208ENST00000392449 G3V318 75 aa12.96□□□□□ -0.34
PTPRK-208ENST00000392449 RRP9O43818 475 aaKnown RBP12.96□□□□□ -0.34
PTPRK-208ENST00000392449 CA11O75493 328 aa12.96□□□□□ -0.34
PTPRK-208ENST00000392449 IGHG4P01861 327 aa12.96□□□□□ -0.34
PTPRK-208ENST00000392449 VDAC1P21796 283 aa12.96□□□□□ -0.34
PTPRK-208ENST00000392449 MAPK3P27361 379 aaPredicted RBP12.96□□□□□ -0.34
PTPRK-208ENST00000392449 HTR2CP28335 458 aa12.96□□□□□ -0.34
PTPRK-208ENST00000392449 CD69Q07108 199 aa12.96□□□□□ -0.34
PTPRK-208ENST00000392449 RBM48Q5RL73 367 aaKnown RBP12.96□□□□□ -0.34
PTPRK-208ENST00000392449 RNF152Q8N8N0 203 aa12.96□□□□□ -0.34
PTPRK-208ENST00000392449 OR8H1Q8NGG4 311 aa12.96□□□□□ -0.34
PTPRK-208ENST00000392449 MCRIP2Q9BUT9 160 aaKnown RBP12.96□□□□□ -0.34
PTPRK-208ENST00000392449 GPR61Q9BZJ8 451 aa12.96□□□□□ -0.34
PTPRK-208ENST00000392449 CST11Q9H112 138 aa12.96□□□□□ -0.34
PTPRK-208ENST00000392449 KLK15Q9H2R5 256 aa12.96□□□□□ -0.34
PTPRK-208ENST00000392449 RAB9BQ9NP90 201 aa12.96□□□□□ -0.34
PTPRK-208ENST00000392449 WSB1Q9Y6I7 421 aa12.96□□□□□ -0.34
PTPRK-208ENST00000392449 NBEAL2Q6ZNJ1 2754 aa12.96□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms