RNA–Protein interactions for RNA: ENST00000376854.5

C9orf40-201, Transcript of chromosome 9 open reading frame 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf40, Length 2,327 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40-201ENST00000376854 CD59P13987 128 aa21.47■■□□□ 1.03
C9orf40-201ENST00000376854 Q6P435 159 aa21.47■■□□□ 1.03
C9orf40-201ENST00000376854 PRR18Q8N4B5 295 aa21.47■■□□□ 1.03
C9orf40-201ENST00000376854 GPR87Q9BY21 358 aa21.47■■□□□ 1.03
C9orf40-201ENST00000376854 NPIPB11E5RHQ5 1161 aa21.46■■□□□ 1.03
C9orf40-201ENST00000376854 IL18BPO95998 194 aa21.46■■□□□ 1.03
C9orf40-201ENST00000376854 IGKV1-39P01597 117 aa21.46■■□□□ 1.03
C9orf40-201ENST00000376854 IGLV2-14P01704 120 aa21.46■■□□□ 1.03
C9orf40-201ENST00000376854 IGKV1D-39P04432 117 aa21.46■■□□□ 1.03
C9orf40-201ENST00000376854 DLK1P80370 383 aa21.46■■□□□ 1.03
C9orf40-201ENST00000376854 OR1K1Q8NGR3 316 aa21.46■■□□□ 1.03
C9orf40-201ENST00000376854 PPP1R3CQ9UQK1 317 aa21.46■■□□□ 1.03
C9orf40-201ENST00000376854 WNT2P09544 360 aa21.46■■□□□ 1.03
C9orf40-201ENST00000376854 TESK1Q15569 626 aa21.46■■□□□ 1.03
C9orf40-201ENST00000376854 ZNF251Q9BRH9 671 aa21.46■■□□□ 1.03
C9orf40-201ENST00000376854 IL17BQ9UHF5 180 aa21.46■■□□□ 1.03
C9orf40-201ENST00000376854 R4GN57 208 aa21.46■■□□□ 1.03
C9orf40-201ENST00000376854 A0A087WWC5 75 aa21.45■■□□□ 1.02
C9orf40-201ENST00000376854 LRP5LA4QPB2 252 aa21.45■■□□□ 1.02
C9orf40-201ENST00000376854 MT-CO3P00414 261 aa21.45■■□□□ 1.02
C9orf40-201ENST00000376854 RPS10P46783 165 aaKnown RBP21.45■■□□□ 1.02
C9orf40-201ENST00000376854 MDP1Q86V88 176 aa21.45■■□□□ 1.02
C9orf40-201ENST00000376854 LSM10Q969L4 123 aaKnown RBP21.45■■□□□ 1.02
C9orf40-201ENST00000376854 NIPSNAP3BQ9BS92 247 aa21.45■■□□□ 1.02
C9orf40-201ENST00000376854 MMP24Q9Y5R2 645 aa21.45■■□□□ 1.02
C9orf40-201ENST00000376854 DNAJC13O75165 2243 aa21.45■■□□□ 1.02
C9orf40-201ENST00000376854 FRYQ5TBA9 3013 aa21.45■■□□□ 1.02
C9orf40-201ENST00000376854 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP21.45■■□□□ 1.02
C9orf40-201ENST00000376854 MEOX1P50221 254 aa21.45■■□□□ 1.02
C9orf40-201ENST00000376854 KHDC3LQ587J8 217 aa21.45■■□□□ 1.02
C9orf40-201ENST00000376854 TCTEX1D2Q8WW35 142 aa21.45■■□□□ 1.02
C9orf40-201ENST00000376854 TVP23CQ96ET8 276 aa21.45■■□□□ 1.02
C9orf40-201ENST00000376854 RBM7Q9Y580 266 aaKnown RBP21.45■■□□□ 1.02
C9orf40-201ENST00000376854 C21orf140B9A014 251 aa21.44■■□□□ 1.02
C9orf40-201ENST00000376854 SIRPB1O00241 398 aa21.44■■□□□ 1.02
C9orf40-201ENST00000376854 SYNGR2O43760 224 aa21.44■■□□□ 1.02
C9orf40-201ENST00000376854 IAPPP10997 89 aa21.44■■□□□ 1.02
C9orf40-201ENST00000376854 MDH2P40926 338 aaKnown RBP21.44■■□□□ 1.02
C9orf40-201ENST00000376854 MOB1BQ7L9L4 216 aa21.44■■□□□ 1.02
C9orf40-201ENST00000376854 BCL2L2Q92843 193 aaPredicted RBP21.44■■□□□ 1.02
C9orf40-201ENST00000376854 RSG1Q9BU20 258 aa21.44■■□□□ 1.02
C9orf40-201ENST00000376854 FAM186AA6NE01 2351 aa21.44■■□□□ 1.02
C9orf40-201ENST00000376854 TRAV1-1A0A0B4J248 108 aa21.44■■□□□ 1.02
C9orf40-201ENST00000376854 SCGB1C1Q8TD33 95 aa21.44■■□□□ 1.02
C9orf40-201ENST00000376854 NANOS1Q8WY41 292 aaKnown RBP21.44■■□□□ 1.02
C9orf40-201ENST00000376854 TRAPPC2LQ9UL33 140 aa21.44■■□□□ 1.02
C9orf40-201ENST00000376854 KCNS2Q9ULS6 477 aa21.44■■□□□ 1.02
C9orf40-201ENST00000376854 CDX4O14627 284 aaPredicted RBP21.43■■□□□ 1.02
C9orf40-201ENST00000376854 IGKV1-5P01602 117 aa21.43■■□□□ 1.02
C9orf40-201ENST00000376854 ZNF16P17020 682 aaPredicted RBP21.43■■□□□ 1.02
C9orf40-201ENST00000376854 RTL8AQ9BWD3 113 aa21.43■■□□□ 1.02
C9orf40-201ENST00000376854 NIT2Q9NQR4 276 aa21.43■■□□□ 1.02
C9orf40-201ENST00000376854 PSENENQ9NZ42 101 aa21.43■■□□□ 1.02
C9orf40-201ENST00000376854 GNG13Q9P2W3 67 aa21.43■■□□□ 1.02
C9orf40-201ENST00000376854 LOC102723971A0A1B0GUV8 181 aa21.43■■□□□ 1.02
C9orf40-201ENST00000376854 A0A1W2PR80 420 aa21.43■■□□□ 1.02
C9orf40-201ENST00000376854 OR2H2O95918 312 aa21.43■■□□□ 1.02
C9orf40-201ENST00000376854 SP1P08047 785 aa21.43■■□□□ 1.02
C9orf40-201ENST00000376854 ZNF497Q6ZNH5 498 aa21.43■■□□□ 1.02
C9orf40-201ENST00000376854 VASH2Q86V25 355 aa21.43■■□□□ 1.02
C9orf40-201ENST00000376854 UBALD1Q8TB05 177 aa21.43■■□□□ 1.02
C9orf40-201ENST00000376854 BCL2L14Q9BZR8 327 aa21.43■■□□□ 1.02
C9orf40-201ENST00000376854 TREM2Q9NZC2 230 aa21.43■■□□□ 1.02
C9orf40-201ENST00000376854 CLN5O75503 358 aa21.42■■□□□ 1.02
C9orf40-201ENST00000376854 METTL15P1P0C7V9 234 aa21.42■■□□□ 1.02
C9orf40-201ENST00000376854 EIF2S3P41091 472 aaKnown RBP21.42■■□□□ 1.02
C9orf40-201ENST00000376854 FBXW9Q5XUX1 488 aa21.42■■□□□ 1.02
C9orf40-201ENST00000376854 ZNF343Q6P1L6 599 aa21.42■■□□□ 1.02
C9orf40-201ENST00000376854 WDR86Q86TI4 376 aa21.42■■□□□ 1.02
C9orf40-201ENST00000376854 GP6Q9HCN6 339 aa21.42■■□□□ 1.02
C9orf40-201ENST00000376854 TMEM164Q5U3C3 297 aa21.41■■□□□ 1.02
C9orf40-201ENST00000376854 DHRS13Q6UX07 377 aa21.41■■□□□ 1.02
C9orf40-201ENST00000376854 SLC35E3Q7Z769 313 aa21.41■■□□□ 1.02
C9orf40-201ENST00000376854 RPRMQ9NS64 109 aa21.41■■□□□ 1.02
C9orf40-201ENST00000376854 KLF13Q9Y2Y9 288 aaPredicted RBP21.41■■□□□ 1.02
C9orf40-201ENST00000376854 M0R296 226 aa21.41■■□□□ 1.02
C9orf40-201ENST00000376854 ATXN7O15265 892 aaPredicted RBP21.41■■□□□ 1.02
C9orf40-201ENST00000376854 FABP1P07148 127 aa21.41■■□□□ 1.02
C9orf40-201ENST00000376854 ARL16Q0P5N6 197 aa21.41■■□□□ 1.02
C9orf40-201ENST00000376854 ELOBQ15370 118 aa21.41■■□□□ 1.02
C9orf40-201ENST00000376854 SCCPDHQ8NBX0 429 aa21.41■■□□□ 1.02
C9orf40-201ENST00000376854 Q8WTZ3 238 aa21.41■■□□□ 1.02
C9orf40-201ENST00000376854 LIN7CQ9NUP9 197 aaKnown RBP21.41■■□□□ 1.02
C9orf40-201ENST00000376854 KIAA0141Q14154 515 aaPredicted RBP21.4■■□□□ 1.02
C9orf40-201ENST00000376854 SLC10A1Q14973 349 aa21.4■■□□□ 1.02
C9orf40-201ENST00000376854 ZNF585BQ52M93 769 aa21.4■■□□□ 1.02
C9orf40-201ENST00000376854 NCMAPQ5T1S8 102 aa21.4■■□□□ 1.02
C9orf40-201ENST00000376854 ZNF525Q8N782 197 aa21.4■■□□□ 1.02
C9orf40-201ENST00000376854 URGCP-MRPS24S4R325 110 aa21.4■■□□□ 1.02
C9orf40-201ENST00000376854 TBC1D28Q2M2D7 210 aa21.4■■□□□ 1.02
C9orf40-201ENST00000376854 Q8IYB0 196 aa21.4■■□□□ 1.02
C9orf40-201ENST00000376854 OR10G4Q8NGN3 311 aa21.4■■□□□ 1.02
C9orf40-201ENST00000376854 VSIRQ9H7M9 311 aa21.4■■□□□ 1.02
C9orf40-201ENST00000376854 KLRC4-KLRK1H3BQV0 150 aa21.39■■□□□ 1.02
C9orf40-201ENST00000376854 WDR1O75083 606 aa21.39■■□□□ 1.02
C9orf40-201ENST00000376854 CXCL1P09341 107 aa21.39■■□□□ 1.02
C9orf40-201ENST00000376854 DEFB127Q9H1M4 99 aa21.39■■□□□ 1.02
C9orf40-201ENST00000376854 SIRT7Q9NRC8 400 aa21.39■■□□□ 1.02
C9orf40-201ENST00000376854 GSN-AS1Q9NRJ2 163 aa21.39■■□□□ 1.02
C9orf40-201ENST00000376854 POLDIP2Q9Y2S7 368 aa21.39■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 106.7 ms