RNA–Protein interactions for RNA: ENST00000374826.8

PMS1-202, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 1 (best) BASIC

Gene PMS1, Length 948 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-202ENST00000374826 OR51F2Q8NH61 342 aa3.54□□□□□ -1.84
PMS1-202ENST00000374826 RPS4Y2Q8TD47 263 aa3.54□□□□□ -1.84
PMS1-202ENST00000374826 PP6455Q8WZ26 134 aa3.54□□□□□ -1.84
PMS1-202ENST00000374826 AQP3Q92482 292 aa3.54□□□□□ -1.84
PMS1-202ENST00000374826 SLAMF9Q96A28 289 aa3.54□□□□□ -1.84
PMS1-202ENST00000374826 BORCS8Q96FH0 119 aa3.54□□□□□ -1.84
PMS1-202ENST00000374826 PGLYRP3Q96LB9 341 aa3.54□□□□□ -1.84
PMS1-202ENST00000374826 OPALINQ96PE5 141 aa3.54□□□□□ -1.84
PMS1-202ENST00000374826 TMEM246Q9BRR3 403 aa3.54□□□□□ -1.84
PMS1-202ENST00000374826 TLNRD1Q9H1K6 362 aa3.54□□□□□ -1.84
PMS1-202ENST00000374826 OR51I2Q9H344 312 aa3.54□□□□□ -1.84
PMS1-202ENST00000374826 DUSP21Q9H596 190 aa3.54□□□□□ -1.84
PMS1-202ENST00000374826 PATZ1Q9HBE1 687 aaKnown RBP3.54□□□□□ -1.84
PMS1-202ENST00000374826 TMEM165Q9HC07 324 aa3.54□□□□□ -1.84
PMS1-202ENST00000374826 BABAM2Q9NXR7 383 aa3.54□□□□□ -1.84
PMS1-202ENST00000374826 TAS2R4Q9NYW5 299 aa3.54□□□□□ -1.84
PMS1-202ENST00000374826 CTSZQ9UBR2 303 aa3.54□□□□□ -1.84
PMS1-202ENST00000374826 DUX4Q9UBX2 424 aa3.54□□□□□ -1.84
PMS1-202ENST00000374826 BLOC1S6Q9UL45 172 aa3.54□□□□□ -1.84
PMS1-202ENST00000374826 SLC7A11Q9UPY5 501 aa3.54□□□□□ -1.84
PMS1-202ENST00000374826 LSM2Q9Y333 95 aaKnown RBP3.54□□□□□ -1.84
PMS1-202ENST00000374826 PPIAL4AQ9Y536 164 aa3.54□□□□□ -1.84
PMS1-202ENST00000374826 ATRQ13535 2644 aa3.53□□□□□ -1.84
PMS1-202ENST00000374826 TRAV38-1A0A0B4J264 116 aa3.53□□□□□ -1.84
PMS1-202ENST00000374826 A0A1W2PPK0 400 aa3.53□□□□□ -1.84
PMS1-202ENST00000374826 NKX6-3A6NJ46 265 aa3.53□□□□□ -1.84
PMS1-202ENST00000374826 A8MV72 311 aaPredicted RBP3.53□□□□□ -1.84
PMS1-202ENST00000374826 B4DSR2 109 aa3.53□□□□□ -1.84
PMS1-202ENST00000374826 F8VVB4 439 aa3.53□□□□□ -1.84
PMS1-202ENST00000374826 F8VWA3 439 aa3.53□□□□□ -1.84
PMS1-202ENST00000374826 CTDSP2O14595 271 aa3.53□□□□□ -1.84
PMS1-202ENST00000374826 DENRO43583 198 aaKnown RBP3.53□□□□□ -1.84
PMS1-202ENST00000374826 SPRY1O43609 319 aaPredicted RBP3.53□□□□□ -1.84
PMS1-202ENST00000374826 SULT1B1O43704 296 aa3.53□□□□□ -1.84
PMS1-202ENST00000374826 ANGPTL7O43827 346 aa3.53□□□□□ -1.84
PMS1-202ENST00000374826 FCN3O75636 299 aa3.53□□□□□ -1.84
PMS1-202ENST00000374826 NXPH2O95156 264 aa3.53□□□□□ -1.84
PMS1-202ENST00000374826 SERPINA3P01011 423 aa3.53□□□□□ -1.84
PMS1-202ENST00000374826 LHBP01229 141 aa3.53□□□□□ -1.84
PMS1-202ENST00000374826 CD2P06729 351 aa3.53□□□□□ -1.84
PMS1-202ENST00000374826 PGA5P0DJD9 388 aa3.53□□□□□ -1.84
PMS1-202ENST00000374826 CALCBP10092 127 aa3.53□□□□□ -1.84
PMS1-202ENST00000374826 BCL3P20749 454 aa3.53□□□□□ -1.84
PMS1-202ENST00000374826 GLRA1P23415 457 aa3.53□□□□□ -1.84
PMS1-202ENST00000374826 GABRA2P47869 451 aa3.53□□□□□ -1.84
PMS1-202ENST00000374826 PITPNBP48739 271 aa3.53□□□□□ -1.84
PMS1-202ENST00000374826 RBP2P50120 134 aa3.53□□□□□ -1.84
PMS1-202ENST00000374826 MTCP1P56278 107 aa3.53□□□□□ -1.84
PMS1-202ENST00000374826 TAS2R43P59537 309 aa3.53□□□□□ -1.84
PMS1-202ENST00000374826 GABARAPL2P60520 117 aa3.53□□□□□ -1.84
PMS1-202ENST00000374826 RPS11P62280 158 aaKnown RBP eCLIP3.53□□□□□ -1.84
PMS1-202ENST00000374826 RPS25P62851 125 aaKnown RBP3.53□□□□□ -1.84
PMS1-202ENST00000374826 GNB2P62879 340 aa3.53□□□□□ -1.84
PMS1-202ENST00000374826 INSL4Q14641 139 aa3.53□□□□□ -1.84
PMS1-202ENST00000374826 SPHARQ15513 63 aa3.53□□□□□ -1.84
PMS1-202ENST00000374826 MICBQ29980 383 aa3.53□□□□□ -1.84
PMS1-202ENST00000374826 SMIM21Q3B7S5 101 aa3.53□□□□□ -1.84
PMS1-202ENST00000374826 CCDC58Q4VC31 144 aa3.53□□□□□ -1.84
PMS1-202ENST00000374826 FAM27D1Q5T7N8 215 aa3.53□□□□□ -1.84
PMS1-202ENST00000374826 DDI2Q5TDH0 399 aa3.53□□□□□ -1.84
PMS1-202ENST00000374826 LIPKQ5VXJ0 399 aa3.53□□□□□ -1.84
PMS1-202ENST00000374826 STUMQ69YW2 141 aa3.53□□□□□ -1.84
PMS1-202ENST00000374826 FIP1L1Q6UN15 594 aaKnown RBP3.53□□□□□ -1.84
PMS1-202ENST00000374826 SLC25A26Q70HW3 274 aa3.53□□□□□ -1.84
PMS1-202ENST00000374826 UTS2BQ765I0 119 aa3.53□□□□□ -1.84
PMS1-202ENST00000374826 KRT74Q7RTS7 529 aa3.53□□□□□ -1.84
PMS1-202ENST00000374826 PRSS48Q7RTY5 328 aa3.53□□□□□ -1.84
PMS1-202ENST00000374826 ZNF573Q86YE8 665 aa3.53□□□□□ -1.84
PMS1-202ENST00000374826 CCDC54Q8NEL0 328 aa3.53□□□□□ -1.84
PMS1-202ENST00000374826 OR8B3Q8NGG8 313 aa3.53□□□□□ -1.84
PMS1-202ENST00000374826 OR10Z1Q8NGY1 313 aa3.53□□□□□ -1.84
PMS1-202ENST00000374826 HAVCR2Q8TDQ0 301 aa3.53□□□□□ -1.84
PMS1-202ENST00000374826 GPR148Q8TDV2 347 aa3.53□□□□□ -1.84
PMS1-202ENST00000374826 PHLDA1Q8WV24 401 aaPredicted RBP3.53□□□□□ -1.84
PMS1-202ENST00000374826 GHSRQ92847 366 aa3.53□□□□□ -1.84
PMS1-202ENST00000374826 TMEM106AQ96A25 262 aa3.53□□□□□ -1.84
PMS1-202ENST00000374826 TMEM186Q96B77 213 aa3.53□□□□□ -1.84
PMS1-202ENST00000374826 TMIGD2Q96BF3 282 aa3.53□□□□□ -1.84
PMS1-202ENST00000374826 C10orf35Q96D05 121 aa3.53□□□□□ -1.84
PMS1-202ENST00000374826 TECTBQ96PL2 329 aa3.53□□□□□ -1.84
PMS1-202ENST00000374826 GAFA1Q96PS6 74 aa3.53□□□□□ -1.84
PMS1-202ENST00000374826 OR8B2Q96RD0 313 aa3.53□□□□□ -1.84
PMS1-202ENST00000374826 CCL13Q99616 98 aa3.53□□□□□ -1.84
PMS1-202ENST00000374826 CHCHD6Q9BRQ6 235 aa3.53□□□□□ -1.84
PMS1-202ENST00000374826 TMED9Q9BVK6 235 aa3.53□□□□□ -1.84
PMS1-202ENST00000374826 CDCA4Q9BXL8 241 aa3.53□□□□□ -1.84
PMS1-202ENST00000374826 FAM192AQ9GZU8 254 aa3.53□□□□□ -1.84
PMS1-202ENST00000374826 ELL3Q9HB65 397 aaPredicted RBP3.53□□□□□ -1.84
PMS1-202ENST00000374826 NEK6Q9HC98 313 aa3.53□□□□□ -1.84
PMS1-202ENST00000374826 POLDIP2Q9Y2S7 368 aa3.53□□□□□ -1.84
PMS1-202ENST00000374826 SVEP1Q4LDE5 3571 aa3.53□□□□□ -1.84
PMS1-202ENST00000374826 NF1P21359 2839 aa3.52□□□□□ -1.85
PMS1-202ENST00000374826 CUBNO60494 3623 aa3.52□□□□□ -1.85
PMS1-202ENST00000374826 IGKV1D-17A0A075B6S4 117 aa3.52□□□□□ -1.85
PMS1-202ENST00000374826 TRAV8-7A0A075B6U6 113 aa3.52□□□□□ -1.85
PMS1-202ENST00000374826 IGKV1-12A0A0C4DH73 117 aa3.52□□□□□ -1.85
PMS1-202ENST00000374826 A0A0G2JMP0 313 aa3.52□□□□□ -1.85
PMS1-202ENST00000374826 TRBV5-5A0A0J9YX44 114 aa3.52□□□□□ -1.85
PMS1-202ENST00000374826 A0A0X1KG70 313 aa3.52□□□□□ -1.85
PMS1-202ENST00000374826 OR2AT4A6NND4 320 aa3.52□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms