RNA–Protein interactions for RNA: ENST00000374426.6

CXCL12-202, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 1 (best) BASIC

Gene CXCL12, Length 470 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-202ENST00000374426 RPL22L1Q6P5R6 122 aaKnown RBP10.7□□□□□ -0.7
CXCL12-202ENST00000374426 TMEM65Q6PI78 240 aa10.7□□□□□ -0.7
CXCL12-202ENST00000374426 GAPTQ8N292 157 aa10.7□□□□□ -0.7
CXCL12-202ENST00000374426 PRR18Q8N4B5 295 aa10.7□□□□□ -0.7
CXCL12-202ENST00000374426 OR4K15Q8NH41 348 aa10.7□□□□□ -0.7
CXCL12-202ENST00000374426 OR1L1Q8NH94 360 aa10.7□□□□□ -0.7
CXCL12-202ENST00000374426 RITA1Q96K30 269 aa10.7□□□□□ -0.7
CXCL12-202ENST00000374426 ZNF184Q99676 751 aaPredicted RBP10.7□□□□□ -0.7
CXCL12-202ENST00000374426 ISYNA1Q9NPH2 558 aa10.7□□□□□ -0.7
CXCL12-202ENST00000374426 TRAPPC2LQ9UL33 140 aa10.7□□□□□ -0.7
CXCL12-202ENST00000374426 IGHV7-81A0A0B4J1V7 117 aa10.69□□□□□ -0.7
CXCL12-202ENST00000374426 FAM90A10PA6NDY2 464 aa10.69□□□□□ -0.7
CXCL12-202ENST00000374426 CIB2O75838 187 aa10.69□□□□□ -0.7
CXCL12-202ENST00000374426 ATP5HO75947 161 aa10.69□□□□□ -0.7
CXCL12-202ENST00000374426 IGFBP3P17936 291 aaPredicted RBP10.69□□□□□ -0.7
CXCL12-202ENST00000374426 RCC1P18754 421 aaPredicted RBP10.69□□□□□ -0.7
CXCL12-202ENST00000374426 CNTFRP26992 372 aa10.69□□□□□ -0.7
CXCL12-202ENST00000374426 ACTBP60709 375 aa10.69□□□□□ -0.7
CXCL12-202ENST00000374426 ADARB1P78563 741 aaKnown RBP10.69□□□□□ -0.7
CXCL12-202ENST00000374426 RIPK1Q13546 671 aa10.69□□□□□ -0.7
CXCL12-202ENST00000374426 C6orf183Q5T699 404 aa10.69□□□□□ -0.7
CXCL12-202ENST00000374426 FAM27D1Q5T7N8 215 aa10.69□□□□□ -0.7
CXCL12-202ENST00000374426 OR2G6Q5TZ20 316 aa10.69□□□□□ -0.7
CXCL12-202ENST00000374426 ZNF429Q86V71 674 aa10.69□□□□□ -0.7
CXCL12-202ENST00000374426 OR13C5Q8NGS8 318 aa10.69□□□□□ -0.7
CXCL12-202ENST00000374426 APH1BQ8WW43 257 aa10.69□□□□□ -0.7
CXCL12-202ENST00000374426 DCUN1D4Q92564 292 aa10.69□□□□□ -0.7
CXCL12-202ENST00000374426 CYYR1Q96J86 154 aa10.69□□□□□ -0.7
CXCL12-202ENST00000374426 OR51J1Q9H342 316 aa10.69□□□□□ -0.7
CXCL12-202ENST00000374426 SPACA1Q9HBV2 294 aa10.69□□□□□ -0.7
CXCL12-202ENST00000374426 PARP11Q9NR21 331 aa10.69□□□□□ -0.7
CXCL12-202ENST00000374426 ETAA1Q9NY74 926 aa10.69□□□□□ -0.7
CXCL12-202ENST00000374426 RPL36Q9Y3U8 105 aaKnown RBP10.69□□□□□ -0.7
CXCL12-202ENST00000374426 MCRIP1C9JLW8 97 aa10.68□□□□□ -0.7
CXCL12-202ENST00000374426 OVOL1O14753 267 aa10.68□□□□□ -0.7
CXCL12-202ENST00000374426 HLA-DRB1P01911 266 aa10.68□□□□□ -0.7
CXCL12-202ENST00000374426 ETV1P50549 477 aa10.68□□□□□ -0.7
CXCL12-202ENST00000374426 RAB9AP51151 201 aa10.68□□□□□ -0.7
CXCL12-202ENST00000374426 GNMTQ14749 295 aa10.68□□□□□ -0.7
CXCL12-202ENST00000374426 MORN2Q502X0 79 aa10.68□□□□□ -0.7
CXCL12-202ENST00000374426 RAB12Q6IQ22 244 aa10.68□□□□□ -0.7
CXCL12-202ENST00000374426 OVCH2Q7RTZ1 564 aa10.68□□□□□ -0.7
CXCL12-202ENST00000374426 ANKRD60Q9BZ19 345 aa10.68□□□□□ -0.7
CXCL12-202ENST00000374426 ALX4Q9H161 411 aaPredicted RBP10.68□□□□□ -0.7
CXCL12-202ENST00000374426 RAB9BQ9NP90 201 aa10.68□□□□□ -0.7
CXCL12-202ENST00000374426 FGF20Q9NP95 211 aaPredicted RBP10.68□□□□□ -0.7
CXCL12-202ENST00000374426 OR2S2Q9NQN1 319 aa10.68□□□□□ -0.7
CXCL12-202ENST00000374426 GAR1Q9NY12 217 aaKnown RBP10.68□□□□□ -0.7
CXCL12-202ENST00000374426 TRAV8-7A0A075B6U6 113 aa10.67□□□□□ -0.7
CXCL12-202ENST00000374426 TRAV41A0A0B4J266 112 aa10.67□□□□□ -0.7
CXCL12-202ENST00000374426 TRBV5-5A0A0J9YX44 114 aa10.67□□□□□ -0.7
CXCL12-202ENST00000374426 LOC100130705A0A1B0GUX0 176 aa10.67□□□□□ -0.7
CXCL12-202ENST00000374426 OGG1O15527 345 aa10.67□□□□□ -0.7
CXCL12-202ENST00000374426 SAP30O75446 220 aa10.67□□□□□ -0.7
CXCL12-202ENST00000374426 SC5DO75845 299 aa10.67□□□□□ -0.7
CXCL12-202ENST00000374426 LALBAP00709 142 aa10.67□□□□□ -0.7
CXCL12-202ENST00000374426 FRMD6-AS1P0C7T7 363 aa10.67□□□□□ -0.7
CXCL12-202ENST00000374426 SPNP16150 400 aa10.67□□□□□ -0.7
CXCL12-202ENST00000374426 BLVRBP30043 206 aaPredicted RBP10.67□□□□□ -0.7
CXCL12-202ENST00000374426 GPR176Q14439 515 aa10.67□□□□□ -0.7
CXCL12-202ENST00000374426 SMN1Q16637 294 aaKnown RBP10.67□□□□□ -0.7
CXCL12-202ENST00000374426 C5orf64Q2M2E5 130 aa10.67□□□□□ -0.7
CXCL12-202ENST00000374426 C5orf24Q7Z6I8 188 aa10.67□□□□□ -0.7
CXCL12-202ENST00000374426 ODF3L1Q8IXM7 274 aa10.67□□□□□ -0.7
CXCL12-202ENST00000374426 MINDY2Q8NBR6 621 aa10.67□□□□□ -0.7
CXCL12-202ENST00000374426 DLX4Q92988 240 aaPredicted RBP10.67□□□□□ -0.7
CXCL12-202ENST00000374426 MUL1Q969V5 352 aa10.67□□□□□ -0.7
CXCL12-202ENST00000374426 SMIM19Q96E16 107 aa10.67□□□□□ -0.7
CXCL12-202ENST00000374426 MRPS24Q96EL2 167 aaKnown RBP10.67□□□□□ -0.7
CXCL12-202ENST00000374426 SLC29A1Q99808 456 aa10.67□□□□□ -0.7
CXCL12-202ENST00000374426 NABP2Q9BQ15 211 aa10.67□□□□□ -0.7
CXCL12-202ENST00000374426 MRPL20Q9BYC9 149 aaKnown RBP10.67□□□□□ -0.7
CXCL12-202ENST00000374426 TAF9BQ9HBM6 251 aa10.67□□□□□ -0.7
CXCL12-202ENST00000374426 MRPS28Q9Y2Q9 187 aaKnown RBP10.67□□□□□ -0.7
CXCL12-202ENST00000374426 PEX16Q9Y5Y5 336 aa10.67□□□□□ -0.7
CXCL12-202ENST00000374426 NBR2O15453 112 aa10.66□□□□□ -0.7
CXCL12-202ENST00000374426 SOX15O60248 233 aa10.66□□□□□ -0.7
CXCL12-202ENST00000374426 CA11O75493 328 aa10.66□□□□□ -0.7
CXCL12-202ENST00000374426 WBP4O75554 376 aaKnown RBP10.66□□□□□ -0.7
CXCL12-202ENST00000374426 GPX5O75715 221 aa10.66□□□□□ -0.7
CXCL12-202ENST00000374426 LYL1P12980 280 aa10.66□□□□□ -0.7
CXCL12-202ENST00000374426 PPP1CCP36873 323 aaKnown RBP10.66□□□□□ -0.7
CXCL12-202ENST00000374426 SLURP1P55000 103 aa10.66□□□□□ -0.7
CXCL12-202ENST00000374426 RPS11P62280 158 aaKnown RBP eCLIP10.66□□□□□ -0.7
CXCL12-202ENST00000374426 NDPQ00604 133 aa10.66□□□□□ -0.7
CXCL12-202ENST00000374426 C19orf54Q5BKX5 351 aa10.66□□□□□ -0.7
CXCL12-202ENST00000374426 TRAT1Q6PIZ9 186 aa10.66□□□□□ -0.7
CXCL12-202ENST00000374426 GLIPR1L1Q6UWM5 242 aa10.66□□□□□ -0.7
CXCL12-202ENST00000374426 OR52L2PQ8NGH6 319 aa10.66□□□□□ -0.7
CXCL12-202ENST00000374426 GHSRQ92847 366 aa10.66□□□□□ -0.7
CXCL12-202ENST00000374426 ZNF251Q9BRH9 671 aa10.66□□□□□ -0.7
CXCL12-202ENST00000374426 ABHD14AQ9BUJ0 271 aa10.66□□□□□ -0.7
CXCL12-202ENST00000374426 BANF2Q9H503 90 aa10.66□□□□□ -0.7
CXCL12-202ENST00000374426 MBNL3Q9NUK0 354 aaKnown RBP10.66□□□□□ -0.7
CXCL12-202ENST00000374426 CHCHD3Q9NX63 227 aaKnown RBP10.66□□□□□ -0.7
CXCL12-202ENST00000374426 BABAM2Q9NXR7 383 aa10.66□□□□□ -0.7
CXCL12-202ENST00000374426 FAM53CQ9NYF3 392 aa10.66□□□□□ -0.7
CXCL12-202ENST00000374426 FBXO7Q9Y3I1 522 aa10.66□□□□□ -0.7
CXCL12-202ENST00000374426 TRIM64CA6NLI5 447 aa10.65□□□□□ -0.7
CXCL12-202ENST00000374426 NDUFA3O95167 84 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 81.6 ms