RNA–Protein interactions for RNA: ENST00000371820.3

COL5A1-202, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 2

Gene COL5A1, Length 628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-202ENST00000371820 TAF9BQ9HBM6 251 aa8.76□□□□□ -1.01
COL5A1-202ENST00000371820 ZNF286AQ9HBT8 521 aa8.76□□□□□ -1.01
COL5A1-202ENST00000371820 TREM1Q9NP99 234 aa8.76□□□□□ -1.01
COL5A1-202ENST00000371820 CYTL1Q9NRR1 136 aa8.76□□□□□ -1.01
COL5A1-202ENST00000371820 TAAR3PQ9P1P4 343 aa8.76□□□□□ -1.01
COL5A1-202ENST00000371820 ANXA10Q9UJ72 324 aa8.76□□□□□ -1.01
COL5A1-202ENST00000371820 ARFGEF3Q5TH69 2177 aa8.76□□□□□ -1.01
COL5A1-202ENST00000371820 YLPM1P49750 1951 aaKnown RBP8.75□□□□□ -1.01
COL5A1-202ENST00000371820 IGKV1-9A0A0C4DH69 117 aa8.75□□□□□ -1.01
COL5A1-202ENST00000371820 DUXBA0A1W2PPF3 345 aa8.75□□□□□ -1.01
COL5A1-202ENST00000371820 C5orf49A4QMS7 147 aa8.75□□□□□ -1.01
COL5A1-202ENST00000371820 C17orf100A8MU93 164 aa8.75□□□□□ -1.01
COL5A1-202ENST00000371820 PHF1O43189 567 aaPredicted RBP8.75□□□□□ -1.01
COL5A1-202ENST00000371820 IGHV3-13P01766 116 aa8.75□□□□□ -1.01
COL5A1-202ENST00000371820 IGHV4-31P0DP07 118 aa8.75□□□□□ -1.01
COL5A1-202ENST00000371820 PVALBP20472 110 aaPredicted RBP8.75□□□□□ -1.01
COL5A1-202ENST00000371820 HNF1AP20823 631 aa8.75□□□□□ -1.01
COL5A1-202ENST00000371820 TUBG1P23258 451 aa8.75□□□□□ -1.01
COL5A1-202ENST00000371820 S100GP29377 79 aa8.75□□□□□ -1.01
COL5A1-202ENST00000371820 RPL12P30050 165 aaKnown RBP8.75□□□□□ -1.01
COL5A1-202ENST00000371820 GPR6P46095 362 aaPredicted RBP8.75□□□□□ -1.01
COL5A1-202ENST00000371820 DVL1P1P54792 670 aaPredicted RBP8.75□□□□□ -1.01
COL5A1-202ENST00000371820 MALLQ13021 153 aa8.75□□□□□ -1.01
COL5A1-202ENST00000371820 ATXN7L3Q14CW9 347 aaPredicted RBP8.75□□□□□ -1.01
COL5A1-202ENST00000371820 SLC9A3R2Q15599 337 aa8.75□□□□□ -1.01
COL5A1-202ENST00000371820 GUCA2BQ16661 112 aa8.75□□□□□ -1.01
COL5A1-202ENST00000371820 MSMPQ1L6U9 139 aa8.75□□□□□ -1.01
COL5A1-202ENST00000371820 OTPQ5XKR4 325 aa8.75□□□□□ -1.01
COL5A1-202ENST00000371820 LRP11Q86VZ4 500 aa8.75□□□□□ -1.01
COL5A1-202ENST00000371820 SAXO1Q8IYX7 474 aa8.75□□□□□ -1.01
COL5A1-202ENST00000371820 ZCCHC24Q8N2G6 241 aaKnown RBP8.75□□□□□ -1.01
COL5A1-202ENST00000371820 UBAC2Q8NBM4 344 aa8.75□□□□□ -1.01
COL5A1-202ENST00000371820 CPEB3Q8NE35 698 aaKnown RBP8.75□□□□□ -1.01
COL5A1-202ENST00000371820 LFNGQ8NES3 379 aa8.75□□□□□ -1.01
COL5A1-202ENST00000371820 OR1F12Q8NHA8 337 aa8.75□□□□□ -1.01
COL5A1-202ENST00000371820 AKR7LQ8NHP1 331 aa8.75□□□□□ -1.01
COL5A1-202ENST00000371820 TMEM230Q96A57 120 aa8.75□□□□□ -1.01
COL5A1-202ENST00000371820 Q96M66 194 aa8.75□□□□□ -1.01
COL5A1-202ENST00000371820 CMSS1Q9BQ75 279 aaKnown RBP8.75□□□□□ -1.01
COL5A1-202ENST00000371820 SLC5A7Q9GZV3 580 aa8.75□□□□□ -1.01
COL5A1-202ENST00000371820 RIMS4Q9H426 269 aaPredicted RBP8.75□□□□□ -1.01
COL5A1-202ENST00000371820 ELL3Q9HB65 397 aaPredicted RBP8.75□□□□□ -1.01
COL5A1-202ENST00000371820 BIN3Q9NQY0 253 aa8.75□□□□□ -1.01
COL5A1-202ENST00000371820 TUBG2Q9NRH3 451 aa8.75□□□□□ -1.01
COL5A1-202ENST00000371820 UQCC1Q9NVA1 299 aa8.75□□□□□ -1.01
COL5A1-202ENST00000371820 MLXQ9UH92 298 aa8.75□□□□□ -1.01
COL5A1-202ENST00000371820 FZR1Q9UM11 496 aa8.75□□□□□ -1.01
COL5A1-202ENST00000371820 PRELID3BQ9Y3B1 194 aa8.75□□□□□ -1.01
COL5A1-202ENST00000371820 TMED3Q9Y3Q3 217 aa8.75□□□□□ -1.01
COL5A1-202ENST00000371820 KPTNQ9Y664 436 aa8.75□□□□□ -1.01
COL5A1-202ENST00000371820 IGHV4-61A0A0C4DH41 118 aa8.74□□□□□ -1.01
COL5A1-202ENST00000371820 ZNF850A8MQ14 1090 aa8.74□□□□□ -1.01
COL5A1-202ENST00000371820 GPR137BO60478 399 aa8.74□□□□□ -1.01
COL5A1-202ENST00000371820 DEDDO75618 318 aa8.74□□□□□ -1.01
COL5A1-202ENST00000371820 HTR3BO95264 441 aa8.74□□□□□ -1.01
COL5A1-202ENST00000371820 GLAP06280 429 aa8.74□□□□□ -1.01
COL5A1-202ENST00000371820 ZNF728P0DKX0 622 aa8.74□□□□□ -1.01
COL5A1-202ENST00000371820 OR5H8P0DN80 308 aa8.74□□□□□ -1.01
COL5A1-202ENST00000371820 MMP9P14780 707 aa8.74□□□□□ -1.01
COL5A1-202ENST00000371820 SERPINA2P20848 420 aa8.74□□□□□ -1.01
COL5A1-202ENST00000371820 GLRA1P23415 457 aa8.74□□□□□ -1.01
COL5A1-202ENST00000371820 PAX6P26367 422 aa8.74□□□□□ -1.01
COL5A1-202ENST00000371820 DUSP1P28562 367 aa8.74□□□□□ -1.01
COL5A1-202ENST00000371820 P2RY1P47900 373 aa8.74□□□□□ -1.01
COL5A1-202ENST00000371820 HOXA1P49639 335 aaPredicted RBP8.74□□□□□ -1.01
COL5A1-202ENST00000371820 TMEM33P57088 247 aa8.74□□□□□ -1.01
COL5A1-202ENST00000371820 PPP1CBP62140 327 aa8.74□□□□□ -1.01
COL5A1-202ENST00000371820 SUPT4H1P63272 117 aaKnown RBP8.74□□□□□ -1.01
COL5A1-202ENST00000371820 GNMTQ14749 295 aa8.74□□□□□ -1.01
COL5A1-202ENST00000371820 UBE2V2Q15819 145 aa8.74□□□□□ -1.01
COL5A1-202ENST00000371820 IAH1Q2TAA2 248 aaPredicted RBP8.74□□□□□ -1.01
COL5A1-202ENST00000371820 Q6ZS49 121 aa8.74□□□□□ -1.01
COL5A1-202ENST00000371820 IQCF2Q8IXL9 164 aa8.74□□□□□ -1.01
COL5A1-202ENST00000371820 SGK3Q96BR1 496 aa8.74□□□□□ -1.01
COL5A1-202ENST00000371820 ZNF2Q9BSG1 426 aaPredicted RBP8.74□□□□□ -1.01
COL5A1-202ENST00000371820 PBDC1Q9BVG4 233 aa8.74□□□□□ -1.01
COL5A1-202ENST00000371820 WNT5BQ9H1J7 359 aa8.74□□□□□ -1.01
COL5A1-202ENST00000371820 WDR13Q9H1Z4 485 aa8.74□□□□□ -1.01
COL5A1-202ENST00000371820 OPA3Q9H6K4 179 aa8.74□□□□□ -1.01
COL5A1-202ENST00000371820 UNKLQ9H9P5 680 aaKnown RBP8.74□□□□□ -1.01
COL5A1-202ENST00000371820 RHOFQ9HBH0 211 aa8.74□□□□□ -1.01
COL5A1-202ENST00000371820 GSKIPQ9P0R6 139 aa8.74□□□□□ -1.01
COL5A1-202ENST00000371820 ZNF319Q9P2F9 582 aa8.74□□□□□ -1.01
COL5A1-202ENST00000371820 LRP5LA4QPB2 252 aa8.73□□□□□ -1.01
COL5A1-202ENST00000371820 RNASEK-C17orf49H0YIS7 233 aa8.73□□□□□ -1.01
COL5A1-202ENST00000371820 J3QW42 95 aa8.73□□□□□ -1.01
COL5A1-202ENST00000371820 HSPA12AO43301 675 aa8.73□□□□□ -1.01
COL5A1-202ENST00000371820 DIRAS3O95661 229 aa8.73□□□□□ -1.01
COL5A1-202ENST00000371820 NRASP01111 189 aa8.73□□□□□ -1.01
COL5A1-202ENST00000371820 SFTPBP07988 381 aa8.73□□□□□ -1.01
COL5A1-202ENST00000371820 HKR1P10072 659 aa8.73□□□□□ -1.01
COL5A1-202ENST00000371820 RPS2P15880 293 aaKnown RBP8.73□□□□□ -1.01
COL5A1-202ENST00000371820 HTR5AP47898 357 aa8.73□□□□□ -1.01
COL5A1-202ENST00000371820 ERVS71-1P61550 626 aa8.73□□□□□ -1.01
COL5A1-202ENST00000371820 RAB32Q13637 225 aa8.73□□□□□ -1.01
COL5A1-202ENST00000371820 RNF212Q495C1 297 aa8.73□□□□□ -1.01
COL5A1-202ENST00000371820 FAM74A1Q5RGS3 127 aa8.73□□□□□ -1.01
COL5A1-202ENST00000371820 MBNL2Q5VZF2 373 aaKnown RBP8.73□□□□□ -1.01
COL5A1-202ENST00000371820 TMEM42Q69YG0 159 aa8.73□□□□□ -1.01
COL5A1-202ENST00000371820 ZNF774Q6NX45 483 aa8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms