RNA–Protein interactions for RNA: ENST00000357008.6

CHD4-201, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CHD4, Length 6,496 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-201ENST00000357008 ZNF721Q8TF20 911 aa12.93□□□□□ -0.34
CHD4-201ENST00000357008 ASCL3Q9NQ33 180 aa12.93□□□□□ -0.34
CHD4-201ENST00000357008 TRIP11Q15643 1979 aa12.93□□□□□ -0.34
CHD4-201ENST00000357008 FAM157AC9JC47 383 aa12.93□□□□□ -0.34
CHD4-201ENST00000357008 MPDU1O75352 247 aa12.93□□□□□ -0.34
CHD4-201ENST00000357008 NGFRP08138 427 aa12.93□□□□□ -0.34
CHD4-201ENST00000357008 MPLP40238 635 aa12.93□□□□□ -0.34
CHD4-201ENST00000357008 MFAP2P55001 183 aa12.93□□□□□ -0.34
CHD4-201ENST00000357008 ZNF738Q8NE65 137 aa12.93□□□□□ -0.34
CHD4-201ENST00000357008 MYOZ3Q8TDC0 251 aa12.93□□□□□ -0.34
CHD4-201ENST00000357008 TMEM222Q9H0R3 208 aa12.93□□□□□ -0.34
CHD4-201ENST00000357008 ZFP30Q9Y2G7 519 aa12.93□□□□□ -0.34
CHD4-201ENST00000357008 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.92□□□□□ -0.34
CHD4-201ENST00000357008 OR8I2Q8N0Y5 310 aa12.92□□□□□ -0.34
CHD4-201ENST00000357008 HSPB9Q9BQS6 159 aa12.92□□□□□ -0.34
CHD4-201ENST00000357008 TLNRD1Q9H1K6 362 aa12.92□□□□□ -0.34
CHD4-201ENST00000357008 NPDC1Q9NQX5 325 aaPredicted RBP12.92□□□□□ -0.34
CHD4-201ENST00000357008 RHBDL1O75783 438 aa12.92□□□□□ -0.34
CHD4-201ENST00000357008 P2RY4P51582 365 aa12.92□□□□□ -0.34
CHD4-201ENST00000357008 HKR1P10072 659 aa12.92□□□□□ -0.34
CHD4-201ENST00000357008 NHLRC3Q5JS37 347 aa12.92□□□□□ -0.34
CHD4-201ENST00000357008 ZNF385CQ66K41 422 aaPredicted RBP12.92□□□□□ -0.34
CHD4-201ENST00000357008 CDC42EP3Q9UKI2 254 aa12.92□□□□□ -0.34
CHD4-201ENST00000357008 SNRNP40Q96DI7 357 aaKnown RBP12.92□□□□□ -0.34
CHD4-201ENST00000357008 OR4C12Q96R67 309 aa12.92□□□□□ -0.34
CHD4-201ENST00000357008 HPRT1P00492 218 aa12.92□□□□□ -0.34
CHD4-201ENST00000357008 MAGEA5P43359 124 aa12.92□□□□□ -0.34
CHD4-201ENST00000357008 OR11H4Q8NGC9 324 aa12.92□□□□□ -0.34
CHD4-201ENST00000357008 SLC25A40Q8TBP6 338 aa12.92□□□□□ -0.34
CHD4-201ENST00000357008 P2RX4Q99571 388 aa12.92□□□□□ -0.34
CHD4-201ENST00000357008 RAB1BQ9H0U4 201 aa12.92□□□□□ -0.34
CHD4-201ENST00000357008 SF3B6Q9Y3B4 125 aaKnown RBP12.92□□□□□ -0.34
CHD4-201ENST00000357008 ISG15P05161 165 aa12.91□□□□□ -0.34
CHD4-201ENST00000357008 LINC00518Q8N0U6 118 aa12.91□□□□□ -0.34
CHD4-201ENST00000357008 OR1P1Q8NH06 330 aa12.91□□□□□ -0.34
CHD4-201ENST00000357008 RSG1Q9BU20 258 aa12.91□□□□□ -0.34
CHD4-201ENST00000357008 C1RLQ9NZP8 487 aa12.91□□□□□ -0.34
CHD4-201ENST00000357008 C1QL1O75973 258 aa12.91□□□□□ -0.34
CHD4-201ENST00000357008 AESQ08117 197 aa12.91□□□□□ -0.34
CHD4-201ENST00000357008 DEFB123Q8N688 67 aa12.91□□□□□ -0.34
CHD4-201ENST00000357008 ZNF385AQ96PM9 386 aaKnown RBP12.91□□□□□ -0.34
CHD4-201ENST00000357008 COA4Q9NYJ1 87 aa12.91□□□□□ -0.34
CHD4-201ENST00000357008 CXorf65A6NEN9 183 aa12.91□□□□□ -0.34
CHD4-201ENST00000357008 ZNF137PP52743 207 aa12.91□□□□□ -0.34
CHD4-201ENST00000357008 SOX8P57073 446 aa12.91□□□□□ -0.34
CHD4-201ENST00000357008 INO80CQ6PI98 192 aaPredicted RBP12.91□□□□□ -0.34
CHD4-201ENST00000357008 MS4A3Q96HJ5 214 aa12.91□□□□□ -0.34
CHD4-201ENST00000357008 DOCK1Q14185 1865 aa12.91□□□□□ -0.34
CHD4-201ENST00000357008 SIGLEC5O15389 551 aa12.91□□□□□ -0.34
CHD4-201ENST00000357008 SIGLEC14Q08ET2 396 aa12.91□□□□□ -0.34
CHD4-201ENST00000357008 OR4B1Q8NGF8 309 aa12.91□□□□□ -0.34
CHD4-201ENST00000357008 PAXXQ9BUH6 204 aa12.91□□□□□ -0.34
CHD4-201ENST00000357008 TRBV5-7A0A0A0MS05 114 aa12.91□□□□□ -0.34
CHD4-201ENST00000357008 SPINT1O43278 529 aa12.91□□□□□ -0.34
CHD4-201ENST00000357008 WNT5AP41221 380 aa12.91□□□□□ -0.34
CHD4-201ENST00000357008 AQP3Q92482 292 aa12.91□□□□□ -0.34
CHD4-201ENST00000357008 COL25A1Q9BXS0 654 aaPredicted RBP12.91□□□□□ -0.34
CHD4-201ENST00000357008 A8MWL6 223 aa12.9□□□□□ -0.34
CHD4-201ENST00000357008 NDUFB4O95168 129 aa12.9□□□□□ -0.34
CHD4-201ENST00000357008 DLX1P56177 255 aa12.9□□□□□ -0.34
CHD4-201ENST00000357008 OR51B2Q9Y5P1 312 aa12.9□□□□□ -0.34
CHD4-201ENST00000357008 PXMP4Q9Y6I8 212 aa12.9□□□□□ -0.34
CHD4-201ENST00000357008 LOC102724200A0A096LPH7 203 aaPredicted RBP12.9□□□□□ -0.34
CHD4-201ENST00000357008 UPK3AO75631 287 aa12.9□□□□□ -0.34
CHD4-201ENST00000357008 PPP1CCP36873 323 aaKnown RBP12.9□□□□□ -0.34
CHD4-201ENST00000357008 GABRA6Q16445 453 aa12.9□□□□□ -0.34
CHD4-201ENST00000357008 PLPPR5Q32ZL2 321 aa12.9□□□□□ -0.34
CHD4-201ENST00000357008 ASCL5Q7RTU5 278 aa12.9□□□□□ -0.34
CHD4-201ENST00000357008 TMEM208Q9BTX3 173 aa12.9□□□□□ -0.34
CHD4-201ENST00000357008 KLF7O75840 302 aaPredicted RBP12.9□□□□□ -0.34
CHD4-201ENST00000357008 HIKESHIQ53FT3 197 aa12.9□□□□□ -0.34
CHD4-201ENST00000357008 GBGT1Q8N5D6 347 aa12.9□□□□□ -0.34
CHD4-201ENST00000357008 INSIG2Q9Y5U4 225 aa12.9□□□□□ -0.34
CHD4-201ENST00000357008 FGF12P61328 243 aa12.9□□□□□ -0.34
CHD4-201ENST00000357008 PCGF1Q9BSM1 259 aa12.9□□□□□ -0.34
CHD4-201ENST00000357008 TMEM140Q9NV12 185 aa12.9□□□□□ -0.34
CHD4-201ENST00000357008 CLDN18P56856 261 aa12.9□□□□□ -0.35
CHD4-201ENST00000357008 H2BFSP57053 126 aa12.9□□□□□ -0.35
CHD4-201ENST00000357008 SAP30LQ9HAJ7 183 aa12.9□□□□□ -0.35
CHD4-201ENST00000357008 FUT5Q11128 374 aa12.89□□□□□ -0.35
CHD4-201ENST00000357008 CEACAM21Q3KPI0 293 aa12.89□□□□□ -0.35
CHD4-201ENST00000357008 FBXW9Q5XUX1 488 aa12.89□□□□□ -0.35
CHD4-201ENST00000357008 MPTX1A8MV57 137 aa12.89□□□□□ -0.35
CHD4-201ENST00000357008 KLK2P20151 261 aa12.89□□□□□ -0.35
CHD4-201ENST00000357008 DDTP30046 118 aa12.89□□□□□ -0.35
CHD4-201ENST00000357008 PMCHL1Q16048 86 aa12.89□□□□□ -0.35
CHD4-201ENST00000357008 C3AR1Q16581 482 aa12.89□□□□□ -0.35
CHD4-201ENST00000357008 FAM181AQ8N9Y4 354 aa12.89□□□□□ -0.35
CHD4-201ENST00000357008 FAM222BQ8WU58 562 aa12.89□□□□□ -0.35
CHD4-201ENST00000357008 SMIM12Q96EX1 92 aa12.89□□□□□ -0.35
CHD4-201ENST00000357008 CD3EP07766 207 aa12.89□□□□□ -0.35
CHD4-201ENST00000357008 KIR2DL1P43626 348 aaPredicted RBP12.89□□□□□ -0.35
CHD4-201ENST00000357008 UNQ9370/PRO34162Q6UXP9 181 aa12.89□□□□□ -0.35
CHD4-201ENST00000357008 WDR54Q9H977 334 aa12.89□□□□□ -0.35
CHD4-201ENST00000357008 NPTNQ9Y639 398 aa12.89□□□□□ -0.35
CHD4-201ENST00000357008 A0A1W2PP11 408 aa12.89□□□□□ -0.35
CHD4-201ENST00000357008 OR5R1Q8NH85 324 aa12.89□□□□□ -0.35
CHD4-201ENST00000357008 AREGP15514 252 aa12.89□□□□□ -0.35
CHD4-201ENST00000357008 OR8B3Q8NGG8 313 aa12.89□□□□□ -0.35
CHD4-201ENST00000357008 OR8B2Q96RD0 313 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 73.9 ms