RNA–Protein interactions for RNA: ENST00000340477.9

SYNE4-202, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNE4, Length 1,004 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-202ENST00000340477 OR2T6Q8NHC8 308 aa15.45■□□□□ 0.06
SYNE4-202ENST00000340477 LINC01006Q8NI28 216 aa15.45■□□□□ 0.06
SYNE4-202ENST00000340477 RAB3CQ96E17 227 aa15.45■□□□□ 0.06
SYNE4-202ENST00000340477 CMSS1Q9BQ75 279 aaKnown RBP15.45■□□□□ 0.06
SYNE4-202ENST00000340477 OCSTAMPQ9BR26 566 aa15.45■□□□□ 0.06
SYNE4-202ENST00000340477 PECRQ9BY49 303 aa15.45■□□□□ 0.06
SYNE4-202ENST00000340477 DAPK2Q9UIK4 370 aa15.45■□□□□ 0.06
SYNE4-202ENST00000340477 A0A1W2PPE3 182 aa15.44■□□□□ 0.06
SYNE4-202ENST00000340477 LY6LH3BQJ8 138 aa15.44■□□□□ 0.06
SYNE4-202ENST00000340477 CHST1O43916 411 aa15.44■□□□□ 0.06
SYNE4-202ENST00000340477 AIREO43918 545 aa15.44■□□□□ 0.06
SYNE4-202ENST00000340477 NAPSAO96009 420 aa15.44■□□□□ 0.06
SYNE4-202ENST00000340477 CD3GP09693 182 aa15.44■□□□□ 0.06
SYNE4-202ENST00000340477 FAM106CPP0CH98 169 aa15.44■□□□□ 0.06
SYNE4-202ENST00000340477 SLC2A2P11168 524 aaPredicted RBP15.44■□□□□ 0.06
SYNE4-202ENST00000340477 HTD2P86397 168 aa15.44■□□□□ 0.06
SYNE4-202ENST00000340477 MXD1Q05195 221 aa15.44■□□□□ 0.06
SYNE4-202ENST00000340477 ARL6IP1Q15041 203 aa15.44■□□□□ 0.06
SYNE4-202ENST00000340477 UTF1Q5T230 341 aa15.44■□□□□ 0.06
SYNE4-202ENST00000340477 STEAP3Q658P3 488 aa15.44■□□□□ 0.06
SYNE4-202ENST00000340477 C11orf88Q6PI97 169 aa15.44■□□□□ 0.06
SYNE4-202ENST00000340477 OR8H3Q8N146 312 aa15.44■□□□□ 0.06
SYNE4-202ENST00000340477 ATG5Q9H1Y0 275 aa15.44■□□□□ 0.06
SYNE4-202ENST00000340477 A0A0B4J203 849 aa15.43■□□□□ 0.06
SYNE4-202ENST00000340477 HSD17B6O14756 317 aa15.43■□□□□ 0.06
SYNE4-202ENST00000340477 TXNL1O43396 289 aa15.43■□□□□ 0.06
SYNE4-202ENST00000340477 SCGNO76038 276 aa15.43■□□□□ 0.06
SYNE4-202ENST00000340477 GAPDHP04406 335 aaKnown RBP15.43■□□□□ 0.06
SYNE4-202ENST00000340477 JUNBP17275 347 aaPredicted RBP15.43■□□□□ 0.06
SYNE4-202ENST00000340477 HMGN3Q15651 99 aa15.43■□□□□ 0.06
SYNE4-202ENST00000340477 OR10R2Q8NGX6 335 aa15.43■□□□□ 0.06
SYNE4-202ENST00000340477 WFDC12Q8WWY7 111 aa15.43■□□□□ 0.06
SYNE4-202ENST00000340477 IL1F10Q8WWZ1 152 aa15.43■□□□□ 0.06
SYNE4-202ENST00000340477 CENPOQ9BU64 300 aa15.43■□□□□ 0.06
SYNE4-202ENST00000340477 A0A075B6Q4 140 aa15.42■□□□□ 0.06
SYNE4-202ENST00000340477 TRBV6-6A0A0A6YYG2 114 aa15.42■□□□□ 0.06
SYNE4-202ENST00000340477 FOXI3A8MTJ6 420 aaPredicted RBP15.42■□□□□ 0.06
SYNE4-202ENST00000340477 KIR2DS4P43632 304 aa15.42■□□□□ 0.06
SYNE4-202ENST00000340477 EFNB2P52799 333 aa15.42■□□□□ 0.06
SYNE4-202ENST00000340477 SLC25A48Q6ZT89 311 aaKnown RBP15.42■□□□□ 0.06
SYNE4-202ENST00000340477 NR2C2APQ86WQ0 139 aa15.42■□□□□ 0.06
SYNE4-202ENST00000340477 PHF21AQ96BD5 680 aa15.42■□□□□ 0.06
SYNE4-202ENST00000340477 ABHD14AQ9BUJ0 271 aa15.42■□□□□ 0.06
SYNE4-202ENST00000340477 PRSS22Q9GZN4 317 aa15.42■□□□□ 0.06
SYNE4-202ENST00000340477 TIMM23O14925 209 aa15.41■□□□□ 0.06
SYNE4-202ENST00000340477 TMEM127O75204 238 aa15.41■□□□□ 0.06
SYNE4-202ENST00000340477 PPP1CCP36873 323 aaKnown RBP15.41■□□□□ 0.06
SYNE4-202ENST00000340477 TALDO1P37837 337 aa15.41■□□□□ 0.06
SYNE4-202ENST00000340477 TMEM50BP56557 158 aa15.41■□□□□ 0.06
SYNE4-202ENST00000340477 SCAND1P57086 179 aa15.41■□□□□ 0.06
SYNE4-202ENST00000340477 HLA-DRB3P79483 266 aa15.41■□□□□ 0.06
SYNE4-202ENST00000340477 ZNF816Q0VGE8 651 aaPredicted RBP15.41■□□□□ 0.06
SYNE4-202ENST00000340477 PLA2G7Q13093 441 aa15.41■□□□□ 0.06
SYNE4-202ENST00000340477 HES1Q14469 280 aa15.41■□□□□ 0.06
SYNE4-202ENST00000340477 PLAC9Q5JTB6 97 aa15.41■□□□□ 0.06
SYNE4-202ENST00000340477 ZNF880Q6PDB4 577 aa15.41■□□□□ 0.06
SYNE4-202ENST00000340477 CCBE1Q6UXH8 406 aaPredicted RBP15.41■□□□□ 0.06
SYNE4-202ENST00000340477 CROCCP3Q8IVE0 287 aa15.41■□□□□ 0.06
SYNE4-202ENST00000340477 OR2AK2Q8NG84 335 aa15.41■□□□□ 0.06
SYNE4-202ENST00000340477 OR52L2PQ8NGH6 319 aa15.41■□□□□ 0.06
SYNE4-202ENST00000340477 OR56B4Q8NH76 319 aa15.41■□□□□ 0.06
SYNE4-202ENST00000340477 YIPF6Q96EC8 236 aa15.41■□□□□ 0.06
SYNE4-202ENST00000340477 HDHD3Q9BSH5 251 aaPredicted RBP15.41■□□□□ 0.06
SYNE4-202ENST00000340477 SLC25A33Q9BSK2 321 aa15.41■□□□□ 0.06
SYNE4-202ENST00000340477 RNF167Q9H6Y7 350 aa15.41■□□□□ 0.06
SYNE4-202ENST00000340477 A0A1W2PPI3 338 aa15.4■□□□□ 0.06
SYNE4-202ENST00000340477 TRIM64CA6NLI5 447 aa15.4■□□□□ 0.06
SYNE4-202ENST00000340477 SERPINE3A8MV23 424 aa15.4■□□□□ 0.06
SYNE4-202ENST00000340477 M0QZK8 103 aa15.4■□□□□ 0.06
SYNE4-202ENST00000340477 HSPA12AO43301 675 aa15.4■□□□□ 0.06
SYNE4-202ENST00000340477 YPEL1O60688 119 aa15.4■□□□□ 0.06
SYNE4-202ENST00000340477 PEX14O75381 377 aa15.4■□□□□ 0.06
SYNE4-202ENST00000340477 OR2F2O95006 317 aa15.4■□□□□ 0.06
SYNE4-202ENST00000340477 HIST1H1DP16402 221 aaKnown RBP15.4■□□□□ 0.06
SYNE4-202ENST00000340477 CD24P25063 80 aa15.4■□□□□ 0.06
SYNE4-202ENST00000340477 MORN2Q502X0 79 aa15.4■□□□□ 0.06
SYNE4-202ENST00000340477 IDNKQ5T6J7 187 aa15.4■□□□□ 0.06
SYNE4-202ENST00000340477 MOB3BQ86TA1 216 aa15.4■□□□□ 0.06
SYNE4-202ENST00000340477 THNSL2Q86YJ6 484 aa15.4■□□□□ 0.06
SYNE4-202ENST00000340477 TGIF2LXQ8IUE1 241 aa15.4■□□□□ 0.06
SYNE4-202ENST00000340477 LYG1Q8N1E2 194 aa15.4■□□□□ 0.06
SYNE4-202ENST00000340477 DRAM1Q8N682 238 aa15.4■□□□□ 0.06
SYNE4-202ENST00000340477 SGMS2Q8NHU3 365 aa15.4■□□□□ 0.06
SYNE4-202ENST00000340477 LGALS14Q8TCE9 139 aa15.4■□□□□ 0.06
SYNE4-202ENST00000340477 CYYR1Q96J86 154 aa15.4■□□□□ 0.06
SYNE4-202ENST00000340477 YPEL2Q96QA6 119 aa15.4■□□□□ 0.06
SYNE4-202ENST00000340477 ETV7Q9Y603 341 aa15.4■□□□□ 0.06
SYNE4-202ENST00000340477 IGHV1-3A0A0C4DH29 117 aa15.39■□□□□ 0.05
SYNE4-202ENST00000340477 SNRNP70P08621 437 aaKnown RBP15.39■□□□□ 0.05
SYNE4-202ENST00000340477 CLEC2LP0C7M8 214 aa15.39■□□□□ 0.05
SYNE4-202ENST00000340477 SNRPBP14678 240 aaKnown RBP15.39■□□□□ 0.05
SYNE4-202ENST00000340477 GNB3P16520 340 aa15.39■□□□□ 0.05
SYNE4-202ENST00000340477 TMEM11P17152 192 aa15.39■□□□□ 0.05
SYNE4-202ENST00000340477 REG1BP48304 166 aa15.39■□□□□ 0.05
SYNE4-202ENST00000340477 ARFRP1Q13795 201 aa15.39■□□□□ 0.05
SYNE4-202ENST00000340477 GNMTQ14749 295 aa15.39■□□□□ 0.05
SYNE4-202ENST00000340477 KIR2DS1Q14954 304 aa15.39■□□□□ 0.05
SYNE4-202ENST00000340477 MOGAT2Q3SYC2 334 aa15.39■□□□□ 0.05
SYNE4-202ENST00000340477 LY6G6FQ5SQ64 297 aa15.39■□□□□ 0.05
SYNE4-202ENST00000340477 ZNF439Q8NDP4 499 aa15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 213.8 ms