RNA–Protein interactions for RNA: ENST00000329553.2

RIPPLY3-201, Transcript of ripply transcriptional repressor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RIPPLY3, Length 2,235 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIPPLY3-201ENST00000329553 CTXN2P0C2S0 81 aa17.01■□□□□ 0.31
RIPPLY3-201ENST00000329553 GRNP28799 593 aaKnown RBP17.01■□□□□ 0.31
RIPPLY3-201ENST00000329553 UCP3P55916 312 aa17.01■□□□□ 0.31
RIPPLY3-201ENST00000329553 PIGPP57054 158 aa17.01■□□□□ 0.31
RIPPLY3-201ENST00000329553 HERV-K104P61576 105 aa17.01■□□□□ 0.31
RIPPLY3-201ENST00000329553 RNASE6Q93091 150 aaKnown RBP17.01■□□□□ 0.31
RIPPLY3-201ENST00000329553 ITPR1Q14643 2758 aa17.01■□□□□ 0.31
RIPPLY3-201ENST00000329553 H7C1Q1 480 aa17.01■□□□□ 0.31
RIPPLY3-201ENST00000329553 HLA-DRB3P79483 266 aa17.01■□□□□ 0.31
RIPPLY3-201ENST00000329553 NCMAPQ5T1S8 102 aa17.01■□□□□ 0.31
RIPPLY3-201ENST00000329553 RPL7L1Q6DKI1 246 aaKnown RBP17.01■□□□□ 0.31
RIPPLY3-201ENST00000329553 LINC01560Q8TB33 94 aa17.01■□□□□ 0.31
RIPPLY3-201ENST00000329553 TRAPPC2LQ9UL33 140 aa17.01■□□□□ 0.31
RIPPLY3-201ENST00000329553 F8W036 122 aa17■□□□□ 0.31
RIPPLY3-201ENST00000329553 GATA4P43694 442 aa17■□□□□ 0.31
RIPPLY3-201ENST00000329553 BLOC1S1P78537 153 aa17■□□□□ 0.31
RIPPLY3-201ENST00000329553 TNFAIP6P98066 277 aaPredicted RBP17■□□□□ 0.31
RIPPLY3-201ENST00000329553 COL10A1Q03692 680 aa17■□□□□ 0.31
RIPPLY3-201ENST00000329553 CD177Q8N6Q3 437 aa17■□□□□ 0.31
RIPPLY3-201ENST00000329553 TAF9BQ9HBM6 251 aa17■□□□□ 0.31
RIPPLY3-201ENST00000329553 IL19Q9UHD0 177 aa17■□□□□ 0.31
RIPPLY3-201ENST00000329553 ZDHHC8Q9ULC8 765 aa17■□□□□ 0.31
RIPPLY3-201ENST00000329553 IFNL4K9M1U5 179 aa17■□□□□ 0.31
RIPPLY3-201ENST00000329553 DEDDO75618 318 aa17■□□□□ 0.31
RIPPLY3-201ENST00000329553 PSG2P11465 335 aa17■□□□□ 0.31
RIPPLY3-201ENST00000329553 PHLDA2Q53GA4 152 aa17■□□□□ 0.31
RIPPLY3-201ENST00000329553 EIF5AL1Q6IS14 154 aaKnown RBP17■□□□□ 0.31
RIPPLY3-201ENST00000329553 PLPPR2Q96GM1 343 aa17■□□□□ 0.31
RIPPLY3-201ENST00000329553 SEC11CQ9BY50 192 aa17■□□□□ 0.31
RIPPLY3-201ENST00000329553 ESRP2Q9H6T0 727 aaKnown RBP17■□□□□ 0.31
RIPPLY3-201ENST00000329553 MBNL3Q9NUK0 354 aaKnown RBP17■□□□□ 0.31
RIPPLY3-201ENST00000329553 UQCC1Q9NVA1 299 aa17■□□□□ 0.31
RIPPLY3-201ENST00000329553 WIPI2Q9Y4P8 454 aa17■□□□□ 0.31
RIPPLY3-201ENST00000329553 ROS1P08922 2347 aa16.99■□□□□ 0.31
RIPPLY3-201ENST00000329553 SHISA9B4DS77 424 aa16.99■□□□□ 0.31
RIPPLY3-201ENST00000329553 TUSC2O75896 110 aa16.99■□□□□ 0.31
RIPPLY3-201ENST00000329553 DIRAS3O95661 229 aa16.99■□□□□ 0.31
RIPPLY3-201ENST00000329553 LHBP01229 141 aa16.99■□□□□ 0.31
RIPPLY3-201ENST00000329553 ABCA11PQ4W5N1 156 aa16.99■□□□□ 0.31
RIPPLY3-201ENST00000329553 TMEM268Q5VZI3 342 aa16.99■□□□□ 0.31
RIPPLY3-201ENST00000329553 GGNBP1Q5YKI7 109 aa16.99■□□□□ 0.31
RIPPLY3-201ENST00000329553 KIRREL1Q96J84 757 aa16.99■□□□□ 0.31
RIPPLY3-201ENST00000329553 RSRP1Q9BUV0 290 aa16.99■□□□□ 0.31
RIPPLY3-201ENST00000329553 KIAA2026Q5HYC2 2103 aa16.99■□□□□ 0.31
RIPPLY3-201ENST00000329553 CACNA1DQ01668 2161 aa16.99■□□□□ 0.31
RIPPLY3-201ENST00000329553 RPL12P30050 165 aaKnown RBP16.98■□□□□ 0.31
RIPPLY3-201ENST00000329553 PRDX2P32119 198 aa16.98■□□□□ 0.31
RIPPLY3-201ENST00000329553 PLA2G5P39877 138 aa16.98■□□□□ 0.31
RIPPLY3-201ENST00000329553 AESQ08117 197 aa16.98■□□□□ 0.31
RIPPLY3-201ENST00000329553 MOB1BQ7L9L4 216 aa16.98■□□□□ 0.31
RIPPLY3-201ENST00000329553 DMRTC2Q8IXT2 367 aaPredicted RBP16.98■□□□□ 0.31
RIPPLY3-201ENST00000329553 OR11L1Q8NGX0 322 aa16.98■□□□□ 0.31
RIPPLY3-201ENST00000329553 RTN4IP1Q8WWV3 396 aaPredicted RBP16.98■□□□□ 0.31
RIPPLY3-201ENST00000329553 GCM1Q9NP62 436 aa16.98■□□□□ 0.31
RIPPLY3-201ENST00000329553 SLC2A9Q9NRM0 540 aa16.98■□□□□ 0.31
RIPPLY3-201ENST00000329553 NDRG3Q9UGV2 375 aa16.98■□□□□ 0.31
RIPPLY3-201ENST00000329553 DIDO1Q9BTC0 2240 aaKnown RBP16.98■□□□□ 0.31
RIPPLY3-201ENST00000329553 K7EPK0 472 aa16.98■□□□□ 0.31
RIPPLY3-201ENST00000329553 IFNA21P01568 189 aa16.98■□□□□ 0.31
RIPPLY3-201ENST00000329553 GAPDHP04406 335 aaKnown RBP16.98■□□□□ 0.31
RIPPLY3-201ENST00000329553 OR3A1P47881 315 aa16.98■□□□□ 0.31
RIPPLY3-201ENST00000329553 CAV2P51636 162 aa16.98■□□□□ 0.31
RIPPLY3-201ENST00000329553 DHRS7BQ6IAN0 325 aaPredicted RBP16.98■□□□□ 0.31
RIPPLY3-201ENST00000329553 FOXRED2Q8IWF2 684 aa16.98■□□□□ 0.31
RIPPLY3-201ENST00000329553 FAM71E2Q8N5Q1 922 aa16.98■□□□□ 0.31
RIPPLY3-201ENST00000329553 NEUROG1Q92886 237 aa16.98■□□□□ 0.31
RIPPLY3-201ENST00000329553 CABLES2Q9BTV7 478 aa16.98■□□□□ 0.31
RIPPLY3-201ENST00000329553 HRH4Q9H3N8 390 aa16.98■□□□□ 0.31
RIPPLY3-201ENST00000329553 TREM1Q9NP99 234 aa16.98■□□□□ 0.31
RIPPLY3-201ENST00000329553 IGKV1D-17A0A075B6S4 117 aa16.97■□□□□ 0.31
RIPPLY3-201ENST00000329553 IGHV3OR15-7A0A075B7D8 119 aa16.97■□□□□ 0.31
RIPPLY3-201ENST00000329553 IGKV1D-13A0A0B4J2D9 117 aa16.97■□□□□ 0.31
RIPPLY3-201ENST00000329553 IGKV1-13P0DP09 117 aa16.97■□□□□ 0.31
RIPPLY3-201ENST00000329553 TNFSF4P23510 183 aa16.97■□□□□ 0.31
RIPPLY3-201ENST00000329553 GNRHRP30968 328 aa16.97■□□□□ 0.31
RIPPLY3-201ENST00000329553 KCNJ3P48549 501 aa16.97■□□□□ 0.31
RIPPLY3-201ENST00000329553 SULT1A2P50226 295 aa16.97■□□□□ 0.31
RIPPLY3-201ENST00000329553 FLI1Q01543 452 aaPredicted RBP16.97■□□□□ 0.31
RIPPLY3-201ENST00000329553 PRR18Q8N4B5 295 aa16.97■□□□□ 0.31
RIPPLY3-201ENST00000329553 UBALD1Q8TB05 177 aa16.97■□□□□ 0.31
RIPPLY3-201ENST00000329553 IL1F10Q8WWZ1 152 aa16.97■□□□□ 0.31
RIPPLY3-201ENST00000329553 GALNT14Q96FL9 552 aa16.97■□□□□ 0.31
RIPPLY3-201ENST00000329553 COQ2Q96H96 371 aa16.97■□□□□ 0.31
RIPPLY3-201ENST00000329553 TMEM231Q9H6L2 316 aa16.97■□□□□ 0.31
RIPPLY3-201ENST00000329553 TMEM30CPA0ZSE6 113 aa16.97■□□□□ 0.31
RIPPLY3-201ENST00000329553 NDUFA2O43678 99 aa16.97■□□□□ 0.31
RIPPLY3-201ENST00000329553 LPAR6P43657 344 aa16.97■□□□□ 0.31
RIPPLY3-201ENST00000329553 FAM201AQ5SY85 155 aa16.97■□□□□ 0.31
RIPPLY3-201ENST00000329553 SLC35E4Q6ICL7 350 aa16.97■□□□□ 0.31
RIPPLY3-201ENST00000329553 TMEM88Q6PEY1 159 aa16.97■□□□□ 0.31
RIPPLY3-201ENST00000329553 FAM90A1Q86YD7 464 aa16.97■□□□□ 0.31
RIPPLY3-201ENST00000329553 ZCCHC24Q8N2G6 241 aaKnown RBP16.97■□□□□ 0.31
RIPPLY3-201ENST00000329553 OR10J5Q8NHC4 309 aa16.97■□□□□ 0.31
RIPPLY3-201ENST00000329553 CA5BP1Q8WTZ4 195 aa16.97■□□□□ 0.31
RIPPLY3-201ENST00000329553 SECTM1Q8WVN6 248 aa16.97■□□□□ 0.31
RIPPLY3-201ENST00000329553 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP16.96■□□□□ 0.31
RIPPLY3-201ENST00000329553 E7EQL1 145 aa16.96■□□□□ 0.31
RIPPLY3-201ENST00000329553 SMCO1Q147U7 214 aa16.96■□□□□ 0.31
RIPPLY3-201ENST00000329553 HFEQ30201 348 aa16.96■□□□□ 0.31
RIPPLY3-201ENST00000329553 SP6Q3SY56 376 aa16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms