RNA–Protein interactions for RNA: ENST00000329397.5

PTP4A3-201, Transcript of protein tyrosine phosphatase type IVA, member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTP4A3, Length 2,785 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3-201ENST00000329397 C14orf144Q96I85 54 aa14.79□□□□□ -0.04
PTP4A3-201ENST00000329397 THOC3Q96J01 351 aaKnown RBP14.79□□□□□ -0.04
PTP4A3-201ENST00000329397 RHOVQ96L33 236 aa14.79□□□□□ -0.04
PTP4A3-201ENST00000329397 ATP5SQ99766 215 aa14.79□□□□□ -0.04
PTP4A3-201ENST00000329397 PLA2G3Q9NZ20 509 aa14.79□□□□□ -0.04
PTP4A3-201ENST00000329397 CYB5BO43169 146 aa14.79□□□□□ -0.04
PTP4A3-201ENST00000329397 SELEP16581 610 aa14.79□□□□□ -0.04
PTP4A3-201ENST00000329397 MALSU1Q96EH3 234 aa14.79□□□□□ -0.04
PTP4A3-201ENST00000329397 DOK5Q9P104 306 aa14.79□□□□□ -0.04
PTP4A3-201ENST00000329397 CACNG5Q9UF02 275 aa14.79□□□□□ -0.04
PTP4A3-201ENST00000329397 SERPINE2P07093 398 aa14.78□□□□□ -0.04
PTP4A3-201ENST00000329397 MAGEA5P43359 124 aa14.78□□□□□ -0.04
PTP4A3-201ENST00000329397 C4orf17Q53FE4 359 aa14.78□□□□□ -0.04
PTP4A3-201ENST00000329397 NIPSNAP3BQ9BS92 247 aa14.78□□□□□ -0.04
PTP4A3-201ENST00000329397 GGACTQ9BVM4 153 aa14.78□□□□□ -0.04
PTP4A3-201ENST00000329397 C12orf49Q9H741 205 aa14.78□□□□□ -0.04
PTP4A3-201ENST00000329397 RPRMQ9NS64 109 aa14.78□□□□□ -0.04
PTP4A3-201ENST00000329397 GAB2Q9UQC2 676 aa14.78□□□□□ -0.04
PTP4A3-201ENST00000329397 TNRC6BQ9UPQ9 1833 aaKnown RBP14.78□□□□□ -0.04
PTP4A3-201ENST00000329397 KIR2DS1A0A191URI9 304 aa14.78□□□□□ -0.04
PTP4A3-201ENST00000329397 A0A1B0GW64 132 aa14.78□□□□□ -0.04
PTP4A3-201ENST00000329397 CD300LBA8K4G0 201 aa14.78□□□□□ -0.04
PTP4A3-201ENST00000329397 IGKV1-39P01597 117 aa14.78□□□□□ -0.04
PTP4A3-201ENST00000329397 IGKV1D-39P04432 117 aa14.78□□□□□ -0.04
PTP4A3-201ENST00000329397 CA6P23280 308 aa14.78□□□□□ -0.04
PTP4A3-201ENST00000329397 KIR2DS4P43632 304 aa14.78□□□□□ -0.04
PTP4A3-201ENST00000329397 KIR2DS1Q14954 304 aa14.78□□□□□ -0.04
PTP4A3-201ENST00000329397 OR2T2Q6IF00 324 aa14.78□□□□□ -0.04
PTP4A3-201ENST00000329397 TCEAL6Q6IPX3 200 aa14.78□□□□□ -0.04
PTP4A3-201ENST00000329397 FAM53AQ6NSI3 398 aaPredicted RBP14.78□□□□□ -0.04
PTP4A3-201ENST00000329397 OR10J5Q8NHC4 309 aa14.78□□□□□ -0.04
PTP4A3-201ENST00000329397 TECTBQ96PL2 329 aa14.78□□□□□ -0.04
PTP4A3-201ENST00000329397 H0Y980 276 aa14.77□□□□□ -0.04
PTP4A3-201ENST00000329397 HMGB3O15347 200 aaKnown RBP14.77□□□□□ -0.04
PTP4A3-201ENST00000329397 TRGC2P03986 189 aa14.77□□□□□ -0.04
PTP4A3-201ENST00000329397 PYY3Q5JQD4 70 aa14.77□□□□□ -0.04
PTP4A3-201ENST00000329397 OR5D13Q8NGL4 314 aa14.77□□□□□ -0.04
PTP4A3-201ENST00000329397 A0A1W2PR80 420 aa14.77□□□□□ -0.05
PTP4A3-201ENST00000329397 MARCH11A6NNE9 402 aa14.77□□□□□ -0.05
PTP4A3-201ENST00000329397 ELLP55199 621 aaPredicted RBP14.77□□□□□ -0.05
PTP4A3-201ENST00000329397 TAS2R30P59541 319 aa14.77□□□□□ -0.05
PTP4A3-201ENST00000329397 LINC00696Q6ZRV3 163 aa14.77□□□□□ -0.05
PTP4A3-201ENST00000329397 GNPNAT1Q96EK6 184 aaPredicted RBP14.77□□□□□ -0.05
PTP4A3-201ENST00000329397 KCNS2Q9ULS6 477 aa14.77□□□□□ -0.05
PTP4A3-201ENST00000329397 BOD1L1Q8NFC6 3051 aa14.77□□□□□ -0.05
PTP4A3-201ENST00000329397 SIRPB1O00241 398 aa14.76□□□□□ -0.05
PTP4A3-201ENST00000329397 SMPD2O60906 423 aa14.76□□□□□ -0.05
PTP4A3-201ENST00000329397 ZNF324BQ6AW86 544 aaPredicted RBP14.76□□□□□ -0.05
PTP4A3-201ENST00000329397 TNRC6AQ8NDV7 1962 aaKnown RBP14.76□□□□□ -0.05
PTP4A3-201ENST00000329397 TVP23CQ96ET8 276 aa14.76□□□□□ -0.05
PTP4A3-201ENST00000329397 HIST1H2AAQ96QV6 131 aa14.76□□□□□ -0.05
PTP4A3-201ENST00000329397 TOLLIPQ9H0E2 274 aa14.76□□□□□ -0.05
PTP4A3-201ENST00000329397 OR2W1Q9Y3N9 320 aa14.76□□□□□ -0.05
PTP4A3-201ENST00000329397 RBM7Q9Y580 266 aaKnown RBP14.76□□□□□ -0.05
PTP4A3-201ENST00000329397 LHX2P50458 406 aa14.76□□□□□ -0.05
PTP4A3-201ENST00000329397 RPS16P62249 146 aaKnown RBP14.76□□□□□ -0.05
PTP4A3-201ENST00000329397 ZNF726P1Q15940 193 aa14.76□□□□□ -0.05
PTP4A3-201ENST00000329397 ZNF506Q5JVG8 444 aa14.76□□□□□ -0.05
PTP4A3-201ENST00000329397 CLEC18AA5D8T8 446 aa14.75□□□□□ -0.05
PTP4A3-201ENST00000329397 WDR1O75083 606 aa14.75□□□□□ -0.05
PTP4A3-201ENST00000329397 WNT5AP41221 380 aa14.75□□□□□ -0.05
PTP4A3-201ENST00000329397 TLE4Q04727 773 aa14.75□□□□□ -0.05
PTP4A3-201ENST00000329397 SP5Q6BEB4 398 aaPredicted RBP14.75□□□□□ -0.05
PTP4A3-201ENST00000329397 Q6ZS49 121 aa14.75□□□□□ -0.05
PTP4A3-201ENST00000329397 NUFIP2Q7Z417 695 aaKnown RBP14.75□□□□□ -0.05
PTP4A3-201ENST00000329397 CLEC18CQ8NCF0 446 aa14.75□□□□□ -0.05
PTP4A3-201ENST00000329397 APOBEC3DQ96AK3 386 aaPredicted RBP14.75□□□□□ -0.05
PTP4A3-201ENST00000329397 TCEAL7Q9BRU2 100 aa14.75□□□□□ -0.05
PTP4A3-201ENST00000329397 TMPRSS5Q9H3S3 457 aa14.75□□□□□ -0.05
PTP4A3-201ENST00000329397 DLL3Q9NYJ7 618 aa14.75□□□□□ -0.05
PTP4A3-201ENST00000329397 KIAA1324LA8MWY0 1029 aaPredicted RBP14.75□□□□□ -0.05
PTP4A3-201ENST00000329397 HIST1H2BKO60814 126 aa14.75□□□□□ -0.05
PTP4A3-201ENST00000329397 NEURL1O76050 574 aa14.75□□□□□ -0.05
PTP4A3-201ENST00000329397 HIST1H2BJP06899 126 aa14.75□□□□□ -0.05
PTP4A3-201ENST00000329397 HIST1H2BOP23527 126 aa14.75□□□□□ -0.05
PTP4A3-201ENST00000329397 HIST1H2BBP33778 126 aa14.75□□□□□ -0.05
PTP4A3-201ENST00000329397 CLDN18P56856 261 aa14.75□□□□□ -0.05
PTP4A3-201ENST00000329397 HIST1H2BDP58876 126 aa14.75□□□□□ -0.05
PTP4A3-201ENST00000329397 HIST1H2BCP62807 126 aa14.75□□□□□ -0.05
PTP4A3-201ENST00000329397 BAXQ07812 192 aa14.75□□□□□ -0.05
PTP4A3-201ENST00000329397 HIST2H2BEQ16778 126 aa14.75□□□□□ -0.05
PTP4A3-201ENST00000329397 HIST2H2BFQ5QNW6 126 aaPredicted RBP14.75□□□□□ -0.05
PTP4A3-201ENST00000329397 HAPLN4Q86UW8 402 aa14.75□□□□□ -0.05
PTP4A3-201ENST00000329397 TGIF2LXQ8IUE1 241 aa14.75□□□□□ -0.05
PTP4A3-201ENST00000329397 HIST1H2BHQ93079 126 aa14.75□□□□□ -0.05
PTP4A3-201ENST00000329397 HIST1H2BNQ99877 126 aa14.75□□□□□ -0.05
PTP4A3-201ENST00000329397 HIST1H2BMQ99879 126 aa14.75□□□□□ -0.05
PTP4A3-201ENST00000329397 PARD6GQ9BYG4 376 aaPredicted RBP14.75□□□□□ -0.05
PTP4A3-201ENST00000329397 PRSS50Q9UI38 385 aa14.75□□□□□ -0.05
PTP4A3-201ENST00000329397 SVILO95425 2214 aa14.75□□□□□ -0.05
PTP4A3-201ENST00000329397 IGLV2-14P01704 120 aa14.74□□□□□ -0.05
PTP4A3-201ENST00000329397 HSPB1P04792 205 aaKnown RBP14.74□□□□□ -0.05
PTP4A3-201ENST00000329397 RAB4BP61018 213 aa14.74□□□□□ -0.05
PTP4A3-201ENST00000329397 DCAF12Q5T6F0 453 aa14.74□□□□□ -0.05
PTP4A3-201ENST00000329397 OR2M7Q8NG81 312 aa14.74□□□□□ -0.05
PTP4A3-201ENST00000329397 ZNF703Q9H7S9 590 aaPredicted RBP14.74□□□□□ -0.05
PTP4A3-201ENST00000329397 IFNA5P01569 189 aa14.74□□□□□ -0.05
PTP4A3-201ENST00000329397 IGKV1-5P01602 117 aa14.74□□□□□ -0.05
PTP4A3-201ENST00000329397 HOXA5P20719 270 aa14.74□□□□□ -0.05
PTP4A3-201ENST00000329397 CD200P41217 278 aa14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 178.1 ms