RNA–Protein interactions for RNA: ENST00000316433.8

ZNF540-201, Transcript of zinc finger protein 540, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ZNF540, Length 3,099 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-201ENST00000316433 ITPRIPL2Q3MIP1 535 aa5.72□□□□□ -1.49
ZNF540-201ENST00000316433 MPV17L2Q567V2 206 aa5.72□□□□□ -1.49
ZNF540-201ENST00000316433 WDR38Q5JTN6 314 aa5.72□□□□□ -1.49
ZNF540-201ENST00000316433 GTF2H5Q6ZYL4 71 aa5.72□□□□□ -1.49
ZNF540-201ENST00000316433 BOD1L2Q8IYS8 172 aa5.72□□□□□ -1.49
ZNF540-201ENST00000316433 ZNF676Q8N7Q3 588 aa5.72□□□□□ -1.49
ZNF540-201ENST00000316433 OR51A4Q8NGJ6 313 aa5.72□□□□□ -1.49
ZNF540-201ENST00000316433 OR2AE1Q8NHA4 323 aa5.72□□□□□ -1.49
ZNF540-201ENST00000316433 ZNRF4Q8WWF5 429 aa5.72□□□□□ -1.49
ZNF540-201ENST00000316433 SIGLEC12Q96PQ1 595 aa5.72□□□□□ -1.49
ZNF540-201ENST00000316433 SMIM7Q9BQ49 75 aa5.72□□□□□ -1.49
ZNF540-201ENST00000316433 AGMATQ9BSE5 352 aa5.72□□□□□ -1.49
ZNF540-201ENST00000316433 B9D1Q9UPM9 204 aa5.72□□□□□ -1.49
ZNF540-201ENST00000316433 B9A039 149 aa5.71□□□□□ -1.49
ZNF540-201ENST00000316433 LAMTOR5O43504 91 aa5.71□□□□□ -1.49
ZNF540-201ENST00000316433 PDE6DO43924 150 aa5.71□□□□□ -1.49
ZNF540-201ENST00000316433 EN2P19622 333 aaPredicted RBP5.71□□□□□ -1.49
ZNF540-201ENST00000316433 AADACP22760 399 aa5.71□□□□□ -1.49
ZNF540-201ENST00000316433 GRPRP30550 384 aa5.71□□□□□ -1.49
ZNF540-201ENST00000316433 RBMXP38159 391 aaKnown RBP5.71□□□□□ -1.49
ZNF540-201ENST00000316433 RPL23P62829 140 aaKnown RBP5.71□□□□□ -1.49
ZNF540-201ENST00000316433 HSD52Q0P140 79 aa5.71□□□□□ -1.49
ZNF540-201ENST00000316433 LTC4SQ16873 150 aa5.71□□□□□ -1.49
ZNF540-201ENST00000316433 CEACAM21Q3KPI0 293 aa5.71□□□□□ -1.49
ZNF540-201ENST00000316433 KRTAP27-1Q3LI81 207 aa5.71□□□□□ -1.49
ZNF540-201ENST00000316433 KIAA1644Q3SXP7 199 aa5.71□□□□□ -1.49
ZNF540-201ENST00000316433 ASCL4Q6XD76 172 aa5.71□□□□□ -1.49
ZNF540-201ENST00000316433 TMEM52Q8NDY8 209 aa5.71□□□□□ -1.49
ZNF540-201ENST00000316433 TSTD1Q8NFU3 115 aa5.71□□□□□ -1.49
ZNF540-201ENST00000316433 CITED1Q99966 193 aa5.71□□□□□ -1.49
ZNF540-201ENST00000316433 FAM103A1Q9BTL3 118 aaKnown RBP5.71□□□□□ -1.49
ZNF540-201ENST00000316433 FGF22Q9HCT0 170 aa5.71□□□□□ -1.49
ZNF540-201ENST00000316433 TBC1D29Q9UFV1 150 aa5.71□□□□□ -1.49
ZNF540-201ENST00000316433 TRAV1-1A0A0B4J248 108 aa5.71□□□□□ -1.5
ZNF540-201ENST00000316433 M0R1X1 148 aa5.71□□□□□ -1.5
ZNF540-201ENST00000316433 XRCC2O43543 280 aa5.71□□□□□ -1.5
ZNF540-201ENST00000316433 HNRNPA2B1P22626 353 aaKnown RBP5.71□□□□□ -1.5
ZNF540-201ENST00000316433 ARL3P36405 182 aa5.71□□□□□ -1.5
ZNF540-201ENST00000316433 BVES-AS1Q5T3Y7 98 aa5.71□□□□□ -1.5
ZNF540-201ENST00000316433 CSNK1A1LQ8N752 337 aa5.71□□□□□ -1.5
ZNF540-201ENST00000316433 OR5A2Q8NGI9 324 aa5.71□□□□□ -1.5
ZNF540-201ENST00000316433 PSMG3Q9BT73 122 aaPredicted RBP5.71□□□□□ -1.5
ZNF540-201ENST00000316433 LRRC61Q9BV99 259 aa5.71□□□□□ -1.5
ZNF540-201ENST00000316433 WNT10AQ9GZT5 417 aa5.71□□□□□ -1.5
ZNF540-201ENST00000316433 NPVFQ9HCQ7 196 aa5.71□□□□□ -1.5
ZNF540-201ENST00000316433 RARRES3Q9UL19 164 aa5.71□□□□□ -1.5
ZNF540-201ENST00000316433 HHLA2Q9UM44 414 aa5.71□□□□□ -1.5
ZNF540-201ENST00000316433 WASHC3Q9Y3C0 194 aa5.71□□□□□ -1.5
ZNF540-201ENST00000316433 A0A1B0GTH9 108 aa5.71□□□□□ -1.5
ZNF540-201ENST00000316433 DPRXA6NFQ7 191 aa5.71□□□□□ -1.5
ZNF540-201ENST00000316433 WIPF3A6NGB9 483 aa5.71□□□□□ -1.5
ZNF540-201ENST00000316433 LRRC3CA6NJW4 275 aa5.71□□□□□ -1.5
ZNF540-201ENST00000316433 HIDE1A8MVS5 230 aa5.71□□□□□ -1.5
ZNF540-201ENST00000316433 K7EQS6 105 aa5.71□□□□□ -1.5
ZNF540-201ENST00000316433 CD5LO43866 347 aa5.71□□□□□ -1.5
ZNF540-201ENST00000316433 CNIH1O95406 144 aa5.71□□□□□ -1.5
ZNF540-201ENST00000316433 IL12BP29460 328 aa5.71□□□□□ -1.5
ZNF540-201ENST00000316433 GUCA1AP43080 201 aaPredicted RBP5.71□□□□□ -1.5
ZNF540-201ENST00000316433 ASCL1P50553 236 aa5.71□□□□□ -1.5
ZNF540-201ENST00000316433 DAP3P51398 398 aaKnown RBP5.71□□□□□ -1.5
ZNF540-201ENST00000316433 SSBP2P81877 361 aaPredicted RBP5.71□□□□□ -1.5
ZNF540-201ENST00000316433 SPIN3Q5JUX0 258 aa5.71□□□□□ -1.5
ZNF540-201ENST00000316433 GLYATL3Q5SZD4 288 aa5.71□□□□□ -1.5
ZNF540-201ENST00000316433 INO80CQ6PI98 192 aaPredicted RBP5.71□□□□□ -1.5
ZNF540-201ENST00000316433 ZAR1Q86SH2 424 aa5.71□□□□□ -1.5
ZNF540-201ENST00000316433 OR4K13Q8NH42 304 aa5.71□□□□□ -1.5
ZNF540-201ENST00000316433 NKD1Q969G9 470 aa5.71□□□□□ -1.5
ZNF540-201ENST00000316433 TMEM45BQ96B21 275 aa5.71□□□□□ -1.5
ZNF540-201ENST00000316433 C1orf147Q96MC9 270 aaPredicted RBP5.71□□□□□ -1.5
ZNF540-201ENST00000316433 KCNK17Q96T54 332 aa5.71□□□□□ -1.5
ZNF540-201ENST00000316433 NMNAT3Q96T66 252 aa5.71□□□□□ -1.5
ZNF540-201ENST00000316433 SLC7A10Q9NS82 523 aa5.71□□□□□ -1.5
ZNF540-201ENST00000316433 FAM206AQ9NX38 181 aa5.71□□□□□ -1.5
ZNF540-201ENST00000316433 PSG8Q9UQ74 426 aa5.71□□□□□ -1.5
ZNF540-201ENST00000316433 KIAA1549Q9HCM3 1950 aa5.7□□□□□ -1.5
ZNF540-201ENST00000316433 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP5.7□□□□□ -1.5
ZNF540-201ENST00000316433 MUC21A0A0G2JKD1 596 aa5.7□□□□□ -1.5
ZNF540-201ENST00000316433 MUC21A0A140T8X8 626 aa5.7□□□□□ -1.5
ZNF540-201ENST00000316433 A0A1B0GVT2 93 aa5.7□□□□□ -1.5
ZNF540-201ENST00000316433 DUXBA0A1W2PPF3 345 aa5.7□□□□□ -1.5
ZNF540-201ENST00000316433 TNFSF12O43508 249 aa5.7□□□□□ -1.5
ZNF540-201ENST00000316433 GPX1P07203 203 aa5.7□□□□□ -1.5
ZNF540-201ENST00000316433 CCL5P13501 91 aa5.7□□□□□ -1.5
ZNF540-201ENST00000316433 CRISP2P16562 243 aa5.7□□□□□ -1.5
ZNF540-201ENST00000316433 NTSR1P30989 418 aa5.7□□□□□ -1.5
ZNF540-201ENST00000316433 CCL7P80098 99 aa5.7□□□□□ -1.5
ZNF540-201ENST00000316433 RPL18Q07020 188 aaKnown RBP5.7□□□□□ -1.5
ZNF540-201ENST00000316433 MUC21Q5SSG8 566 aa5.7□□□□□ -1.5
ZNF540-201ENST00000316433 ZNF788Q6ZQV5 615 aa5.7□□□□□ -1.5
ZNF540-201ENST00000316433 BAGE3Q86Y29 109 aa5.7□□□□□ -1.5
ZNF540-201ENST00000316433 BAGE2Q86Y30 109 aa5.7□□□□□ -1.5
ZNF540-201ENST00000316433 LINC00346Q8IVM7 164 aa5.7□□□□□ -1.5
ZNF540-201ENST00000316433 SLC22A24Q8N4F4 322 aa5.7□□□□□ -1.5
ZNF540-201ENST00000316433 OR6K6Q8NGW6 343 aa5.7□□□□□ -1.5
ZNF540-201ENST00000316433 LIN37Q96GY3 246 aaPredicted RBP5.7□□□□□ -1.5
ZNF540-201ENST00000316433 CAPNS2Q96L46 248 aa5.7□□□□□ -1.5
ZNF540-201ENST00000316433 CHRDL1Q9BU40 450 aa5.7□□□□□ -1.5
ZNF540-201ENST00000316433 ULBP3Q9BZM4 244 aa5.7□□□□□ -1.5
ZNF540-201ENST00000316433 JPT1Q9UK76 154 aa5.7□□□□□ -1.5
ZNF540-201ENST00000316433 MSRB2Q9Y3D2 182 aa5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms