RNA–Protein interactions for RNA: ENST00000316048.2

SMCO3-201, Transcript of single-pass membrane protein with coiled-coil domains 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO3, Length 2,104 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO3-201ENST00000316048 CENPXA8MT69 81 aa3.04□□□□□ -1.92
SMCO3-201ENST00000316048 B4DXG7 233 aa3.04□□□□□ -1.92
SMCO3-201ENST00000316048 RAD1O60671 282 aa3.04□□□□□ -1.92
SMCO3-201ENST00000316048 DUSP14O95147 198 aaKnown RBP3.04□□□□□ -1.92
SMCO3-201ENST00000316048 TNFSF15O95150 251 aa3.04□□□□□ -1.92
SMCO3-201ENST00000316048 CD2P06729 351 aa3.04□□□□□ -1.92
SMCO3-201ENST00000316048 CSF3P09919 207 aa3.04□□□□□ -1.92
SMCO3-201ENST00000316048 PGAM2P15259 253 aa3.04□□□□□ -1.92
SMCO3-201ENST00000316048 CD82P27701 267 aa3.04□□□□□ -1.92
SMCO3-201ENST00000316048 NUP62P37198 522 aaPredicted RBP3.04□□□□□ -1.92
SMCO3-201ENST00000316048 RANBP1P43487 201 aa3.04□□□□□ -1.92
SMCO3-201ENST00000316048 SUCLG1P53597 346 aaKnown RBP3.04□□□□□ -1.92
SMCO3-201ENST00000316048 OR10A3P58181 314 aa3.04□□□□□ -1.92
SMCO3-201ENST00000316048 RPL23AP62750 156 aaKnown RBP3.04□□□□□ -1.92
SMCO3-201ENST00000316048 ASAH1Q13510 395 aa3.04□□□□□ -1.92
SMCO3-201ENST00000316048 SGCAQ16586 387 aa3.04□□□□□ -1.92
SMCO3-201ENST00000316048 SLC25A35Q3KQZ1 300 aa3.04□□□□□ -1.92
SMCO3-201ENST00000316048 PAN3Q58A45 887 aaKnown RBP3.04□□□□□ -1.92
SMCO3-201ENST00000316048 HES3Q5TGS1 186 aa3.04□□□□□ -1.92
SMCO3-201ENST00000316048 TMEM244Q5VVB8 128 aa3.04□□□□□ -1.92
SMCO3-201ENST00000316048 HACD4Q5VWC8 232 aa3.04□□□□□ -1.92
SMCO3-201ENST00000316048 DCXRQ7Z4W1 244 aa3.04□□□□□ -1.92
SMCO3-201ENST00000316048 SLC26A10Q8NG04 563 aa3.04□□□□□ -1.92
SMCO3-201ENST00000316048 OR9K2Q8NGE7 335 aa3.04□□□□□ -1.92
SMCO3-201ENST00000316048 OR1L6Q8NGR2 347 aa3.04□□□□□ -1.92
SMCO3-201ENST00000316048 TSEN15Q8WW01 171 aaKnown RBP3.04□□□□□ -1.92
SMCO3-201ENST00000316048 TMEM106AQ96A25 262 aa3.04□□□□□ -1.92
SMCO3-201ENST00000316048 S100A16Q96FQ6 103 aaKnown RBP3.04□□□□□ -1.92
SMCO3-201ENST00000316048 FOXN4Q96NZ1 517 aa3.04□□□□□ -1.92
SMCO3-201ENST00000316048 DERL3Q96Q80 235 aa3.04□□□□□ -1.92
SMCO3-201ENST00000316048 EMC6Q9BV81 110 aa3.04□□□□□ -1.92
SMCO3-201ENST00000316048 KRTAP2-2Q9BYT5 123 aa3.04□□□□□ -1.92
SMCO3-201ENST00000316048 HDHD2Q9H0R4 259 aa3.04□□□□□ -1.92
SMCO3-201ENST00000316048 C1orf198Q9H425 327 aa3.04□□□□□ -1.92
SMCO3-201ENST00000316048 NIPAL2Q9H841 368 aa3.04□□□□□ -1.92
SMCO3-201ENST00000316048 PROK2Q9HC23 129 aa3.04□□□□□ -1.92
SMCO3-201ENST00000316048 CKLFQ9UBR5 152 aa3.04□□□□□ -1.92
SMCO3-201ENST00000316048 SEC16AO15027 2179 aa3.03□□□□□ -1.92
SMCO3-201ENST00000316048 TMEM269A0A1B0GVZ9 245 aa3.03□□□□□ -1.92
SMCO3-201ENST00000316048 TRDCB7Z8K6 153 aa3.03□□□□□ -1.92
SMCO3-201ENST00000316048 H0Y8G0 127 aa3.03□□□□□ -1.92
SMCO3-201ENST00000316048 AIPO00170 330 aa3.03□□□□□ -1.92
SMCO3-201ENST00000316048 PIN1P1O15428 100 aa3.03□□□□□ -1.92
SMCO3-201ENST00000316048 AKR7A2O43488 359 aa3.03□□□□□ -1.92
SMCO3-201ENST00000316048 TRAPPC6AO75865 159 aa3.03□□□□□ -1.92
SMCO3-201ENST00000316048 RBBP9O75884 186 aa3.03□□□□□ -1.92
SMCO3-201ENST00000316048 UBL3O95164 117 aa3.03□□□□□ -1.92
SMCO3-201ENST00000316048 MPZL1O95297 269 aa3.03□□□□□ -1.92
SMCO3-201ENST00000316048 HLA-DQB1P01920 261 aa3.03□□□□□ -1.92
SMCO3-201ENST00000316048 ISG15P05161 165 aa3.03□□□□□ -1.92
SMCO3-201ENST00000316048 PGA4P0DJD7 388 aa3.03□□□□□ -1.92
SMCO3-201ENST00000316048 PGA3P0DJD8 388 aa3.03□□□□□ -1.92
SMCO3-201ENST00000316048 GATA2P23769 480 aaPredicted RBP3.03□□□□□ -1.92
SMCO3-201ENST00000316048 RPS27P42677 84 aaKnown RBP3.03□□□□□ -1.92
SMCO3-201ENST00000316048 DNASE1L1P49184 302 aa3.03□□□□□ -1.92
SMCO3-201ENST00000316048 H3F3AP84243 136 aa3.03□□□□□ -1.92
SMCO3-201ENST00000316048 FMODQ06828 376 aa3.03□□□□□ -1.92
SMCO3-201ENST00000316048 TCTEX1D4Q5JR98 221 aa3.03□□□□□ -1.92
SMCO3-201ENST00000316048 UBE2NLQ5JXB2 153 aa3.03□□□□□ -1.92
SMCO3-201ENST00000316048 LUZP2Q86TE4 346 aa3.03□□□□□ -1.92
SMCO3-201ENST00000316048 NOXO1Q8NFA2 376 aa3.03□□□□□ -1.92
SMCO3-201ENST00000316048 OR6N1Q8NGY5 312 aa3.03□□□□□ -1.92
SMCO3-201ENST00000316048 ENKURQ8TC29 256 aa3.03□□□□□ -1.92
SMCO3-201ENST00000316048 RNF133Q8WVZ7 376 aa3.03□□□□□ -1.92
SMCO3-201ENST00000316048 C11orf40Q8WZ69 217 aa3.03□□□□□ -1.92
SMCO3-201ENST00000316048 RNF2Q99496 336 aa3.03□□□□□ -1.92
SMCO3-201ENST00000316048 UTP23Q9BRU9 249 aaKnown RBP3.03□□□□□ -1.92
SMCO3-201ENST00000316048 TREM1Q9NP99 234 aa3.03□□□□□ -1.92
SMCO3-201ENST00000316048 GLTPQ9NZD2 209 aa3.03□□□□□ -1.92
SMCO3-201ENST00000316048 B4GALT7Q9UBV7 327 aa3.03□□□□□ -1.92
SMCO3-201ENST00000316048 CYB5R1Q9UHQ9 305 aa3.03□□□□□ -1.92
SMCO3-201ENST00000316048 OR52A1Q9UKL2 312 aa3.03□□□□□ -1.92
SMCO3-201ENST00000316048 HHLA2Q9UM44 414 aa3.03□□□□□ -1.92
SMCO3-201ENST00000316048 BOKQ9UMX3 212 aaPredicted RBP3.03□□□□□ -1.92
SMCO3-201ENST00000316048 POLR1DQ9Y2S0 133 aa3.03□□□□□ -1.92
SMCO3-201ENST00000316048 R4GMQ9 66 aa3.03□□□□□ -1.92
SMCO3-201ENST00000316048 EXPH5Q8NEV8 1989 aa3.03□□□□□ -1.93
SMCO3-201ENST00000316048 A0A0G2JMP0 313 aa3.02□□□□□ -1.93
SMCO3-201ENST00000316048 A0A0J9YW62 118 aa3.02□□□□□ -1.93
SMCO3-201ENST00000316048 A0A0X1KG70 313 aa3.02□□□□□ -1.93
SMCO3-201ENST00000316048 FAM240BA0A1B0GVZ2 78 aa3.02□□□□□ -1.93
SMCO3-201ENST00000316048 KLRC4-KLRK1H3BQV0 150 aa3.02□□□□□ -1.93
SMCO3-201ENST00000316048 LYRM1O43325 122 aa3.02□□□□□ -1.93
SMCO3-201ENST00000316048 TRAF3IP2O43734 574 aaPredicted RBP3.02□□□□□ -1.93
SMCO3-201ENST00000316048 MAS1P04201 325 aa3.02□□□□□ -1.93
SMCO3-201ENST00000316048 EIF4EP06730 217 aaKnown RBP3.02□□□□□ -1.93
SMCO3-201ENST00000316048 UBCP0CG48 685 aaKnown RBP3.02□□□□□ -1.93
SMCO3-201ENST00000316048 ATF1P18846 271 aa3.02□□□□□ -1.93
SMCO3-201ENST00000316048 GDF1P27539 372 aa3.02□□□□□ -1.93
SMCO3-201ENST00000316048 HSD11B1P28845 292 aa3.02□□□□□ -1.93
SMCO3-201ENST00000316048 KIR3DL2P43630 455 aa3.02□□□□□ -1.93
SMCO3-201ENST00000316048 CSNK1A1P48729 337 aa3.02□□□□□ -1.93
SMCO3-201ENST00000316048 P2RY4P51582 365 aa3.02□□□□□ -1.93
SMCO3-201ENST00000316048 CLDN6P56747 220 aa3.02□□□□□ -1.93
SMCO3-201ENST00000316048 LMO4P61968 165 aa3.02□□□□□ -1.93
SMCO3-201ENST00000316048 LSM6P62312 80 aaKnown RBP3.02□□□□□ -1.93
SMCO3-201ENST00000316048 MRPS10P82664 201 aaKnown RBP3.02□□□□□ -1.93
SMCO3-201ENST00000316048 HIST3H3Q16695 136 aa3.02□□□□□ -1.93
SMCO3-201ENST00000316048 CLVS2Q5SYC1 327 aa3.02□□□□□ -1.93
SMCO3-201ENST00000316048 HES5Q5TA89 166 aa3.02□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms