RNA–Protein interactions for RNA: ENST00000309660.9

PTPN2-201, Transcript of protein tyrosine phosphatase, non-receptor type 2, humanhuman

TSL 1 (best) BASIC

Gene PTPN2, Length 3,467 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN2-201ENST00000309660 C14orf79Q96F83 325 aa9.77□□□□□ -0.84
PTPN2-201ENST00000309660 GP6Q9HCN6 339 aa9.77□□□□□ -0.84
PTPN2-201ENST00000309660 LYRM2Q9NU23 88 aaPredicted RBP9.77□□□□□ -0.84
PTPN2-201ENST00000309660 IGHV3-43A0A0B4J1X8 118 aa9.77□□□□□ -0.85
PTPN2-201ENST00000309660 PRSS44E7EML9 344 aa9.77□□□□□ -0.85
PTPN2-201ENST00000309660 TXNL1O43396 289 aa9.77□□□□□ -0.85
PTPN2-201ENST00000309660 PSPNO60542 156 aa9.77□□□□□ -0.85
PTPN2-201ENST00000309660 RBMXL2O75526 392 aaKnown RBP9.77□□□□□ -0.85
PTPN2-201ENST00000309660 CD5P06127 495 aa9.77□□□□□ -0.85
PTPN2-201ENST00000309660 IGHV3-43DP0DP04 118 aa9.77□□□□□ -0.85
PTPN2-201ENST00000309660 EDDM3AQ14507 147 aa9.77□□□□□ -0.85
PTPN2-201ENST00000309660 VHLLQ6RSH7 139 aa9.77□□□□□ -0.85
PTPN2-201ENST00000309660 Q6ZRM9 215 aa9.77□□□□□ -0.85
PTPN2-201ENST00000309660 Q6ZS49 121 aa9.77□□□□□ -0.85
PTPN2-201ENST00000309660 RARRES2Q99969 163 aa9.77□□□□□ -0.85
PTPN2-201ENST00000309660 OPN3Q9H1Y3 402 aaPredicted RBP9.77□□□□□ -0.85
PTPN2-201ENST00000309660 KCNJ16Q9NPI9 418 aa9.77□□□□□ -0.85
PTPN2-201ENST00000309660 PUS1Q9Y606 427 aaKnown RBP eCLIP9.77□□□□□ -0.85
PTPN2-201ENST00000309660 HAND1O96004 215 aa9.77□□□□□ -0.85
PTPN2-201ENST00000309660 METTL15P1P0C7V9 234 aa9.77□□□□□ -0.85
PTPN2-201ENST00000309660 RND3P61587 244 aa9.77□□□□□ -0.85
PTPN2-201ENST00000309660 RPS16P62249 146 aaKnown RBP9.77□□□□□ -0.85
PTPN2-201ENST00000309660 Q6ZT83 130 aa9.77□□□□□ -0.85
PTPN2-201ENST00000309660 STX12Q86Y82 276 aa9.77□□□□□ -0.85
PTPN2-201ENST00000309660 OR5D13Q8NGL4 314 aa9.77□□□□□ -0.85
PTPN2-201ENST00000309660 OR1L1Q8NH94 360 aa9.77□□□□□ -0.85
PTPN2-201ENST00000309660 MRGPRDQ8TDS7 321 aa9.77□□□□□ -0.85
PTPN2-201ENST00000309660 SFT2D1Q8WV19 159 aa9.77□□□□□ -0.85
PTPN2-201ENST00000309660 KCNIP1Q9NZI2 227 aa9.77□□□□□ -0.85
PTPN2-201ENST00000309660 DOCK11Q5JSL3 2073 aa9.77□□□□□ -0.85
PTPN2-201ENST00000309660 SPENQ96T58 3664 aaKnown RBP9.76□□□□□ -0.85
PTPN2-201ENST00000309660 DEFB108AA8MXU0 73 aa9.76□□□□□ -0.85
PTPN2-201ENST00000309660 UMAD1C9J7I0 102 aa9.76□□□□□ -0.85
PTPN2-201ENST00000309660 CCL20P78556 96 aa9.76□□□□□ -0.85
PTPN2-201ENST00000309660 KRBOX4Q5JUW0 171 aa9.76□□□□□ -0.85
PTPN2-201ENST00000309660 LINC00596Q86U02 117 aa9.76□□□□□ -0.85
PTPN2-201ENST00000309660 THNSL2Q86YJ6 484 aa9.76□□□□□ -0.85
PTPN2-201ENST00000309660 CLCF1Q9UBD9 225 aa9.76□□□□□ -0.85
PTPN2-201ENST00000309660 TRAV17A0A0B4J275 112 aa9.76□□□□□ -0.85
PTPN2-201ENST00000309660 KRASP01116 189 aa9.76□□□□□ -0.85
PTPN2-201ENST00000309660 IGHV3-13P01766 116 aa9.76□□□□□ -0.85
PTPN2-201ENST00000309660 IGHV3-7P01780 117 aa9.76□□□□□ -0.85
PTPN2-201ENST00000309660 RAC2P15153 192 aa9.76□□□□□ -0.85
PTPN2-201ENST00000309660 CTRB1P17538 263 aa9.76□□□□□ -0.85
PTPN2-201ENST00000309660 KIR2DL2P43627 348 aaPredicted RBP9.76□□□□□ -0.85
PTPN2-201ENST00000309660 ZNF816Q0VGE8 651 aaPredicted RBP9.76□□□□□ -0.85
PTPN2-201ENST00000309660 TESK1Q15569 626 aa9.76□□□□□ -0.85
PTPN2-201ENST00000309660 AKR1C8PQ5T2L2 129 aa9.76□□□□□ -0.85
PTPN2-201ENST00000309660 SHEQ5VZ18 495 aa9.76□□□□□ -0.85
PTPN2-201ENST00000309660 CTRB2Q6GPI1 263 aa9.76□□□□□ -0.85
PTPN2-201ENST00000309660 FIP1L1Q6UN15 594 aaKnown RBP9.76□□□□□ -0.85
PTPN2-201ENST00000309660 BTNL3Q6UXE8 466 aa9.76□□□□□ -0.85
PTPN2-201ENST00000309660 ZNF610Q8N9Z0 462 aa9.76□□□□□ -0.85
PTPN2-201ENST00000309660 POM121Q96HA1 1249 aa9.76□□□□□ -0.85
PTPN2-201ENST00000309660 CLCC1Q96S66 551 aa9.76□□□□□ -0.85
PTPN2-201ENST00000309660 GCH1P30793 250 aa9.76□□□□□ -0.85
PTPN2-201ENST00000309660 RPL23AP62750 156 aaKnown RBP9.76□□□□□ -0.85
PTPN2-201ENST00000309660 HFEQ30201 348 aa9.76□□□□□ -0.85
PTPN2-201ENST00000309660 AWAT1Q58HT5 328 aa9.76□□□□□ -0.85
PTPN2-201ENST00000309660 SPANXN5Q5MJ07 72 aa9.76□□□□□ -0.85
PTPN2-201ENST00000309660 OR52L2PQ8NGH6 319 aa9.76□□□□□ -0.85
PTPN2-201ENST00000309660 RXFP4Q8TDU9 374 aa9.76□□□□□ -0.85
PTPN2-201ENST00000309660 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP9.75□□□□□ -0.85
PTPN2-201ENST00000309660 MLNRO43193 412 aa9.75□□□□□ -0.85
PTPN2-201ENST00000309660 PGA5P0DJD9 388 aa9.75□□□□□ -0.85
PTPN2-201ENST00000309660 ID3Q02535 119 aa9.75□□□□□ -0.85
PTPN2-201ENST00000309660 SARAFQ96BY9 339 aa9.75□□□□□ -0.85
PTPN2-201ENST00000309660 PBDC1Q9BVG4 233 aa9.75□□□□□ -0.85
PTPN2-201ENST00000309660 OR2D2Q9H210 308 aa9.75□□□□□ -0.85
PTPN2-201ENST00000309660 KPTNQ9Y664 436 aa9.75□□□□□ -0.85
PTPN2-201ENST00000309660 PITX3O75364 302 aa9.75□□□□□ -0.85
PTPN2-201ENST00000309660 CRYBA1P05813 215 aa9.75□□□□□ -0.85
PTPN2-201ENST00000309660 H2AFB1P0C5Y9 115 aa9.75□□□□□ -0.85
PTPN2-201ENST00000309660 CECR9P0C854 216 aa9.75□□□□□ -0.85
PTPN2-201ENST00000309660 C10orf91Q5T1B1 145 aa9.75□□□□□ -0.85
PTPN2-201ENST00000309660 DHRS7BQ6IAN0 325 aaPredicted RBP9.75□□□□□ -0.85
PTPN2-201ENST00000309660 INO80CQ6PI98 192 aaPredicted RBP9.75□□□□□ -0.85
PTPN2-201ENST00000309660 ZNF497Q6ZNH5 498 aa9.75□□□□□ -0.85
PTPN2-201ENST00000309660 Q8IYB0 196 aa9.75□□□□□ -0.85
PTPN2-201ENST00000309660 NINJ1Q92982 152 aa9.75□□□□□ -0.85
PTPN2-201ENST00000309660 ARV1Q9H2C2 271 aa9.75□□□□□ -0.85
PTPN2-201ENST00000309660 NDRG3Q9UGV2 375 aa9.75□□□□□ -0.85
PTPN2-201ENST00000309660 STRAPQ9Y3F4 350 aaKnown RBP9.75□□□□□ -0.85
PTPN2-201ENST00000309660 ARG1P05089 322 aa9.75□□□□□ -0.85
PTPN2-201ENST00000309660 LINC00205P59089 165 aa9.75□□□□□ -0.85
PTPN2-201ENST00000309660 OR8G2PQ6IF36 304 aa9.75□□□□□ -0.85
PTPN2-201ENST00000309660 DRAM1Q8N682 238 aa9.75□□□□□ -0.85
PTPN2-201ENST00000309660 AIFM2Q9BRQ8 373 aa9.75□□□□□ -0.85
PTPN2-201ENST00000309660 RSG1Q9BU20 258 aa9.75□□□□□ -0.85
PTPN2-201ENST00000309660 IFNA5P01569 189 aa9.74□□□□□ -0.85
PTPN2-201ENST00000309660 IGKV1-39P01597 117 aa9.74□□□□□ -0.85
PTPN2-201ENST00000309660 IGKV1D-39P04432 117 aa9.74□□□□□ -0.85
PTPN2-201ENST00000309660 FBP1P09467 338 aa9.74□□□□□ -0.85
PTPN2-201ENST00000309660 TLE1Q04724 770 aa9.74□□□□□ -0.85
PTPN2-201ENST00000309660 SRSF7Q16629 238 aaKnown RBP eCLIP9.74□□□□□ -0.85
PTPN2-201ENST00000309660 BEND4Q6ZU67 534 aa9.74□□□□□ -0.85
PTPN2-201ENST00000309660 LILRB2Q8N423 598 aa9.74□□□□□ -0.85
PTPN2-201ENST00000309660 OR2Z1Q8NG97 314 aa9.74□□□□□ -0.85
PTPN2-201ENST00000309660 DCTN5Q9BTE1 182 aa9.74□□□□□ -0.85
PTPN2-201ENST00000309660 ASCL3Q9NQ33 180 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 91.6 ms