RNA–Protein interactions for RNA: ENST00000309190.9

CAST-201, Transcript of calpastatin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CAST, Length 4,282 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-201ENST00000309190 S100A12P80511 92 aa4.17□□□□□ -1.74
CAST-201ENST00000309190 FLI1Q01543 452 aaPredicted RBP4.17□□□□□ -1.74
CAST-201ENST00000309190 BTN1A1Q13410 526 aa4.17□□□□□ -1.74
CAST-201ENST00000309190 HES1Q14469 280 aa4.17□□□□□ -1.74
CAST-201ENST00000309190 ADIPOQQ15848 244 aa4.17□□□□□ -1.74
CAST-201ENST00000309190 BRD3OSQ6XYD6 125 aa4.17□□□□□ -1.74
CAST-201ENST00000309190 TMEM230Q96A57 120 aa4.17□□□□□ -1.74
CAST-201ENST00000309190 RAB3CQ96E17 227 aa4.17□□□□□ -1.74
CAST-201ENST00000309190 GINS4Q9BRT9 223 aa4.17□□□□□ -1.74
CAST-201ENST00000309190 C1orf43Q9BWL3 253 aa4.17□□□□□ -1.74
CAST-201ENST00000309190 PNRC2Q9NPJ4 139 aaKnown RBP4.17□□□□□ -1.74
CAST-201ENST00000309190 PGPEP1Q9NXJ5 209 aa4.17□□□□□ -1.74
CAST-201ENST00000309190 IGKV1-12A0A0C4DH73 117 aa4.16□□□□□ -1.74
CAST-201ENST00000309190 C9JQL5 133 aa4.16□□□□□ -1.74
CAST-201ENST00000309190 H0YIZ8 118 aa4.16□□□□□ -1.74
CAST-201ENST00000309190 MLNRO43193 412 aa4.16□□□□□ -1.74
CAST-201ENST00000309190 SSX5O60225 188 aa4.16□□□□□ -1.74
CAST-201ENST00000309190 SIX6O95475 246 aa4.16□□□□□ -1.74
CAST-201ENST00000309190 IGKV1D-12P01611 117 aa4.16□□□□□ -1.74
CAST-201ENST00000309190 AMY2AP04746 511 aa4.16□□□□□ -1.74
CAST-201ENST00000309190 SFTPCP11686 197 aa4.16□□□□□ -1.74
CAST-201ENST00000309190 ZNF35P13682 527 aa4.16□□□□□ -1.74
CAST-201ENST00000309190 MUC1P15941 1255 aaPredicted RBP4.16□□□□□ -1.74
CAST-201ENST00000309190 AMY2BP19961 511 aa4.16□□□□□ -1.74
CAST-201ENST00000309190 AGAP20933 346 aa4.16□□□□□ -1.74
CAST-201ENST00000309190 FKBP2P26885 142 aaKnown RBP4.16□□□□□ -1.74
CAST-201ENST00000309190 SSTR5P35346 364 aa4.16□□□□□ -1.74
CAST-201ENST00000309190 SUPT4H1P63272 117 aaKnown RBP4.16□□□□□ -1.74
CAST-201ENST00000309190 NKX6-1P78426 367 aaPredicted RBP4.16□□□□□ -1.74
CAST-201ENST00000309190 ATPAF1Q5TC12 328 aaPredicted RBP4.16□□□□□ -1.74
CAST-201ENST00000309190 DOK3Q7L591 496 aa4.16□□□□□ -1.74
CAST-201ENST00000309190 LHFPL1Q86WI0 220 aa4.16□□□□□ -1.74
CAST-201ENST00000309190 BPIFCQ8NFQ6 507 aa4.16□□□□□ -1.74
CAST-201ENST00000309190 OR13G1Q8NGZ3 307 aa4.16□□□□□ -1.74
CAST-201ENST00000309190 TMEM171Q8WVE6 324 aa4.16□□□□□ -1.74
CAST-201ENST00000309190 ST8SIA2Q92186 375 aa4.16□□□□□ -1.74
CAST-201ENST00000309190 THRSPQ92748 146 aa4.16□□□□□ -1.74
CAST-201ENST00000309190 CMSS1Q9BQ75 279 aaKnown RBP4.16□□□□□ -1.74
CAST-201ENST00000309190 LPAR3Q9UBY5 353 aa4.16□□□□□ -1.74
CAST-201ENST00000309190 LINC00527Q9UJ94 153 aa4.16□□□□□ -1.74
CAST-201ENST00000309190 VSIG4Q9Y279 399 aa4.16□□□□□ -1.74
CAST-201ENST00000309190 ZNF816-ZNF321PA0A0X1KG74 233 aa4.16□□□□□ -1.74
CAST-201ENST00000309190 ZNF724A8MTY0 619 aa4.16□□□□□ -1.74
CAST-201ENST00000309190 ARPC1BO15143 372 aaKnown RBP4.16□□□□□ -1.74
CAST-201ENST00000309190 GHRHP01286 108 aa4.16□□□□□ -1.74
CAST-201ENST00000309190 IGHV3-48P01763 117 aa4.16□□□□□ -1.74
CAST-201ENST00000309190 UBCP0CG48 685 aaKnown RBP4.16□□□□□ -1.74
CAST-201ENST00000309190 EGR1P18146 543 aa4.16□□□□□ -1.74
CAST-201ENST00000309190 TIMP3P35625 211 aa4.16□□□□□ -1.74
CAST-201ENST00000309190 RBMS2Q15434 407 aaKnown RBP4.16□□□□□ -1.74
CAST-201ENST00000309190 SLC9A3R2Q15599 337 aa4.16□□□□□ -1.74
CAST-201ENST00000309190 TIMM23BQ5SRD1 257 aa4.16□□□□□ -1.74
CAST-201ENST00000309190 UTF1Q5T230 341 aa4.16□□□□□ -1.74
CAST-201ENST00000309190 RHOUQ7L0Q8 258 aa4.16□□□□□ -1.74
CAST-201ENST00000309190 MALSU1Q96EH3 234 aa4.16□□□□□ -1.74
CAST-201ENST00000309190 BPESC1Q9GZL8 116 aa4.16□□□□□ -1.74
CAST-201ENST00000309190 C12orf4Q9NQ89 552 aa4.16□□□□□ -1.74
CAST-201ENST00000309190 MTCH1Q9NZJ7 389 aa4.16□□□□□ -1.74
CAST-201ENST00000309190 CCSO14618 274 aa4.16□□□□□ -1.74
CAST-201ENST00000309190 HSD17B6O14756 317 aa4.16□□□□□ -1.74
CAST-201ENST00000309190 CD3DP04234 171 aa4.16□□□□□ -1.74
CAST-201ENST00000309190 ACAA1P09110 424 aaPredicted RBP4.16□□□□□ -1.74
CAST-201ENST00000309190 VSIG8P0DPA2 414 aa4.16□□□□□ -1.74
CAST-201ENST00000309190 CBR1P16152 277 aa4.16□□□□□ -1.74
CAST-201ENST00000309190 NUP62P37198 522 aaPredicted RBP4.16□□□□□ -1.74
CAST-201ENST00000309190 LSM6P62312 80 aaKnown RBP4.16□□□□□ -1.74
CAST-201ENST00000309190 EGR3Q06889 387 aa4.16□□□□□ -1.74
CAST-201ENST00000309190 UNC119Q13432 240 aa4.16□□□□□ -1.74
CAST-201ENST00000309190 IGSF11Q5DX21 431 aa4.16□□□□□ -1.74
CAST-201ENST00000309190 TMEM268Q5VZI3 342 aa4.16□□□□□ -1.74
CAST-201ENST00000309190 SLC25A42Q86VD7 318 aa4.16□□□□□ -1.74
CAST-201ENST00000309190 TMEM229BQ8NBD8 167 aa4.16□□□□□ -1.74
CAST-201ENST00000309190 ADPRHL1Q8NDY3 354 aa4.16□□□□□ -1.74
CAST-201ENST00000309190 RNASE6Q93091 150 aaKnown RBP4.16□□□□□ -1.74
CAST-201ENST00000309190 SEC22AQ96IW7 307 aa4.16□□□□□ -1.74
CAST-201ENST00000309190 MNTQ99583 582 aa4.16□□□□□ -1.74
CAST-201ENST00000309190 PARP12Q9H0J9 701 aaKnown RBP4.16□□□□□ -1.74
CAST-201ENST00000309190 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP4.16□□□□□ -1.74
CAST-201ENST00000309190 NACAE9PAV3 2078 aa4.16□□□□□ -1.74
CAST-201ENST00000309190 A0A0A6YYD4 124 aa4.15□□□□□ -1.74
CAST-201ENST00000309190 TEX13DA0A0J9YY54 714 aaPredicted RBP4.15□□□□□ -1.74
CAST-201ENST00000309190 TMEM82A0PJX8 343 aa4.15□□□□□ -1.74
CAST-201ENST00000309190 METTL21EPA6NDL7 271 aa4.15□□□□□ -1.74
CAST-201ENST00000309190 SULT1C2O00338 296 aa4.15□□□□□ -1.74
CAST-201ENST00000309190 BCL2L11O43521 198 aa4.15□□□□□ -1.74
CAST-201ENST00000309190 EIF3GO75821 320 aaKnown RBP eCLIP4.15□□□□□ -1.74
CAST-201ENST00000309190 TGFAP01135 160 aa4.15□□□□□ -1.74
CAST-201ENST00000309190 IL2RGP31785 369 aa4.15□□□□□ -1.74
CAST-201ENST00000309190 OR3A1P47881 315 aa4.15□□□□□ -1.74
CAST-201ENST00000309190 ASCL1P50553 236 aa4.15□□□□□ -1.74
CAST-201ENST00000309190 ZNF260Q3ZCT1 412 aa4.15□□□□□ -1.74
CAST-201ENST00000309190 CLVS2Q5SYC1 327 aa4.15□□□□□ -1.74
CAST-201ENST00000309190 ZNF324BQ6AW86 544 aaPredicted RBP4.15□□□□□ -1.74
CAST-201ENST00000309190 OR5AP2Q8NGF4 316 aa4.15□□□□□ -1.74
CAST-201ENST00000309190 OR14K1Q8NGZ2 314 aa4.15□□□□□ -1.74
CAST-201ENST00000309190 MITD1Q8WV92 249 aa4.15□□□□□ -1.74
CAST-201ENST00000309190 FOXRED1Q96CU9 486 aaPredicted RBP4.15□□□□□ -1.74
CAST-201ENST00000309190 C1orf159Q96HA4 380 aa4.15□□□□□ -1.74
CAST-201ENST00000309190 ABHD14BQ96IU4 210 aa4.15□□□□□ -1.74
CAST-201ENST00000309190 CCL19Q99731 98 aa4.15□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms