RNA–Protein interactions for RNA: ENST00000307340.7

USH2A-201, Transcript of usherin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USH2A, Length 18,883 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH2A-201ENST00000307340 TMEM217Q8N7C4 229 aa3.52□□□□□ -1.85
USH2A-201ENST00000307340 CNEP1R1Q8N9A8 125 aa3.52□□□□□ -1.85
USH2A-201ENST00000307340 PTGDR2Q9Y5Y4 395 aa3.52□□□□□ -1.85
USH2A-201ENST00000307340 CD160O95971 181 aa3.52□□□□□ -1.85
USH2A-201ENST00000307340 B3GALT4O96024 378 aa3.52□□□□□ -1.85
USH2A-201ENST00000307340 MESTQ5EB52 335 aa3.52□□□□□ -1.85
USH2A-201ENST00000307340 BATF2Q8N1L9 274 aa3.52□□□□□ -1.85
USH2A-201ENST00000307340 DYRK2Q92630 601 aa3.52□□□□□ -1.85
USH2A-201ENST00000307340 GNB1LQ9BYB4 327 aa3.52□□□□□ -1.85
USH2A-201ENST00000307340 ZNF407Q9C0G0 2248 aa3.52□□□□□ -1.85
USH2A-201ENST00000307340 K7N7A8 449 aa3.52□□□□□ -1.85
USH2A-201ENST00000307340 MGST3O14880 152 aa3.52□□□□□ -1.85
USH2A-201ENST00000307340 GNB3P16520 340 aa3.52□□□□□ -1.85
USH2A-201ENST00000307340 EXOSC7Q15024 291 aaKnown RBP3.52□□□□□ -1.85
USH2A-201ENST00000307340 C9orf135Q5VTT2 229 aa3.52□□□□□ -1.85
USH2A-201ENST00000307340 PARM1Q6UWI2 310 aa3.52□□□□□ -1.85
USH2A-201ENST00000307340 SPXQ9BT56 116 aa3.52□□□□□ -1.85
USH2A-201ENST00000307340 PLPPR5Q32ZL2 321 aa3.52□□□□□ -1.85
USH2A-201ENST00000307340 FRRS1LQ9P0K9 344 aa3.52□□□□□ -1.85
USH2A-201ENST00000307340 CLEC2DQ9UHP7 191 aa3.52□□□□□ -1.85
USH2A-201ENST00000307340 WIPI2Q9Y4P8 454 aa3.52□□□□□ -1.85
USH2A-201ENST00000307340 hCG_38984A0A1B0GV85 526 aa3.52□□□□□ -1.85
USH2A-201ENST00000307340 OR2Z1Q8NG97 314 aa3.52□□□□□ -1.85
USH2A-201ENST00000307340 TMEM272A0A1B0GTI8 110 aa3.52□□□□□ -1.85
USH2A-201ENST00000307340 PYCARD-AS1I3L0S3 204 aa3.52□□□□□ -1.85
USH2A-201ENST00000307340 J3QT63 122 aa3.52□□□□□ -1.85
USH2A-201ENST00000307340 NMUP48645 174 aa3.52□□□□□ -1.85
USH2A-201ENST00000307340 SPSB4Q96A44 273 aa3.52□□□□□ -1.85
USH2A-201ENST00000307340 SLC25A2Q9BXI2 301 aa3.52□□□□□ -1.85
USH2A-201ENST00000307340 ABCA1O95477 2261 aa3.52□□□□□ -1.85
USH2A-201ENST00000307340 GYPBP06028 91 aa3.51□□□□□ -1.85
USH2A-201ENST00000307340 OR10G9Q8NGN4 311 aa3.51□□□□□ -1.85
USH2A-201ENST00000307340 OR10G7Q8NGN6 311 aa3.51□□□□□ -1.85
USH2A-201ENST00000307340 PAAF1Q9BRP4 392 aa3.51□□□□□ -1.85
USH2A-201ENST00000307340 PLA2G12AQ9BZM1 189 aa3.51□□□□□ -1.85
USH2A-201ENST00000307340 VN1R1Q9GZP7 353 aa3.51□□□□□ -1.85
USH2A-201ENST00000307340 GOLT1BQ9Y3E0 138 aa3.51□□□□□ -1.85
USH2A-201ENST00000307340 TRBV6-7A0A0A0MS04 114 aa3.51□□□□□ -1.85
USH2A-201ENST00000307340 SLC17A3O00476 420 aa3.51□□□□□ -1.85
USH2A-201ENST00000307340 NKG7Q16617 165 aa3.51□□□□□ -1.85
USH2A-201ENST00000307340 POU2AF1Q16633 256 aa3.51□□□□□ -1.85
USH2A-201ENST00000307340 PRSS50Q9UI38 385 aa3.51□□□□□ -1.85
USH2A-201ENST00000307340 PPP1R1AQ13522 171 aa3.51□□□□□ -1.85
USH2A-201ENST00000307340 ODF4Q2M2E3 257 aa3.51□□□□□ -1.85
USH2A-201ENST00000307340 PRSS36Q5K4E3 855 aa3.51□□□□□ -1.85
USH2A-201ENST00000307340 ADAP1O75689 374 aa3.51□□□□□ -1.85
USH2A-201ENST00000307340 OR10J4P0C629 311 aa3.51□□□□□ -1.85
USH2A-201ENST00000307340 FOLR2P14207 255 aa3.51□□□□□ -1.85
USH2A-201ENST00000307340 AVPR2P30518 371 aa3.51□□□□□ -1.85
USH2A-201ENST00000307340 MLF1P58340 268 aa3.51□□□□□ -1.85
USH2A-201ENST00000307340 TMEM249Q2WGJ8 235 aa3.51□□□□□ -1.85
USH2A-201ENST00000307340 ALG14Q96F25 216 aa3.51□□□□□ -1.85
USH2A-201ENST00000307340 PLAGL1Q9UM63 463 aa3.51□□□□□ -1.85
USH2A-201ENST00000307340 OPRK1P41145 380 aa3.51□□□□□ -1.85
USH2A-201ENST00000307340 UBE2IP63279 158 aaKnown RBP3.51□□□□□ -1.85
USH2A-201ENST00000307340 SIRT6Q8N6T7 355 aa3.51□□□□□ -1.85
USH2A-201ENST00000307340 OR8B3Q8NGG8 313 aa3.51□□□□□ -1.85
USH2A-201ENST00000307340 OR8B2Q96RD0 313 aa3.51□□□□□ -1.85
USH2A-201ENST00000307340 OR5V1Q9UGF6 321 aa3.51□□□□□ -1.85
USH2A-201ENST00000307340 FRS3O43559 492 aa3.51□□□□□ -1.85
USH2A-201ENST00000307340 GATA3P23771 443 aa3.51□□□□□ -1.85
USH2A-201ENST00000307340 TGFBR1P36897 503 aa3.51□□□□□ -1.85
USH2A-201ENST00000307340 SNRNP40Q96DI7 357 aaKnown RBP3.51□□□□□ -1.85
USH2A-201ENST00000307340 LRRC61Q9BV99 259 aa3.51□□□□□ -1.85
USH2A-201ENST00000307340 ZNF703Q9H7S9 590 aaPredicted RBP3.51□□□□□ -1.85
USH2A-201ENST00000307340 CISD3P0C7P0 127 aa3.51□□□□□ -1.85
USH2A-201ENST00000307340 FABP2P12104 132 aa3.51□□□□□ -1.85
USH2A-201ENST00000307340 EMDP50402 254 aa3.51□□□□□ -1.85
USH2A-201ENST00000307340 ARF6P62330 175 aa3.51□□□□□ -1.85
USH2A-201ENST00000307340 S100A7L2Q5SY68 101 aa3.51□□□□□ -1.85
USH2A-201ENST00000307340 CFAP77Q6ZQR2 320 aa3.51□□□□□ -1.85
USH2A-201ENST00000307340 OR5A1Q8NGJ0 315 aa3.51□□□□□ -1.85
USH2A-201ENST00000307340 OR51E1Q8TCB6 317 aa3.51□□□□□ -1.85
USH2A-201ENST00000307340 CHCHD1Q96BP2 118 aaKnown RBP3.51□□□□□ -1.85
USH2A-201ENST00000307340 KCNK17Q96T54 332 aa3.51□□□□□ -1.85
USH2A-201ENST00000307340 TWSG1Q9GZX9 223 aa3.51□□□□□ -1.85
USH2A-201ENST00000307340 PEF1Q9UBV8 284 aaKnown RBP3.51□□□□□ -1.85
USH2A-201ENST00000307340 RNASE12Q5GAN4 147 aaKnown RBP3.51□□□□□ -1.85
USH2A-201ENST00000307340 YRDCQ86U90 279 aaKnown RBP3.51□□□□□ -1.85
USH2A-201ENST00000307340 MED12LQ86YW9 2145 aa3.51□□□□□ -1.85
USH2A-201ENST00000307340 Q8N9G6 341 aaPredicted RBP3.51□□□□□ -1.85
USH2A-201ENST00000307340 CEACAM6P40199 344 aa3.51□□□□□ -1.85
USH2A-201ENST00000307340 GLIPR1P48060 266 aa3.51□□□□□ -1.85
USH2A-201ENST00000307340 RCC2Q9P258 522 aaKnown RBP3.51□□□□□ -1.85
USH2A-201ENST00000307340 ARFGEF3Q5TH69 2177 aa3.51□□□□□ -1.85
USH2A-201ENST00000307340 TMPRSS11DO60235 418 aa3.51□□□□□ -1.85
USH2A-201ENST00000307340 EDDM3BP56851 147 aa3.51□□□□□ -1.85
USH2A-201ENST00000307340 BEND2Q8NDZ0 799 aa3.51□□□□□ -1.85
USH2A-201ENST00000307340 RALYQ9UKM9 306 aaKnown RBP3.51□□□□□ -1.85
USH2A-201ENST00000307340 SS18L1O75177 396 aaPredicted RBP3.51□□□□□ -1.85
USH2A-201ENST00000307340 FAM106CPP0CH98 169 aa3.51□□□□□ -1.85
USH2A-201ENST00000307340 LIFP15018 202 aa3.51□□□□□ -1.85
USH2A-201ENST00000307340 NHLH2Q02577 135 aa3.51□□□□□ -1.85
USH2A-201ENST00000307340 SLC38A11Q08AI6 406 aa3.51□□□□□ -1.85
USH2A-201ENST00000307340 SLC25A28Q96A46 364 aa3.51□□□□□ -1.85
USH2A-201ENST00000307340 CNTD2Q9H8S5 307 aa3.51□□□□□ -1.85
USH2A-201ENST00000307340 S100A4P26447 101 aaKnown RBP3.51□□□□□ -1.85
USH2A-201ENST00000307340 PIGFQ07326 219 aa3.51□□□□□ -1.85
USH2A-201ENST00000307340 FOXL1Q12952 345 aa3.51□□□□□ -1.85
USH2A-201ENST00000307340 SLC25A26Q70HW3 274 aa3.51□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms