RNA–Protein interactions for RNA: ENST00000303406.4

HOXC4-201, Transcript of homeobox C4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC4, Length 1,524 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4-201ENST00000303406 OR1L1Q8NH94 360 aa16.27■□□□□ 0.2
HOXC4-201ENST00000303406 FAM222BQ8WU58 562 aa16.27■□□□□ 0.2
HOXC4-201ENST00000303406 DIRC2Q96SL1 478 aa16.27■□□□□ 0.2
HOXC4-201ENST00000303406 ARV1Q9H2C2 271 aa16.27■□□□□ 0.2
HOXC4-201ENST00000303406 METRNQ9UJH8 293 aa16.27■□□□□ 0.2
HOXC4-201ENST00000303406 CELSR3Q9NYQ7 3312 aa16.26■□□□□ 0.19
HOXC4-201ENST00000303406 IGKV1D-17A0A075B6S4 117 aa16.26■□□□□ 0.19
HOXC4-201ENST00000303406 A0A1B0GU03 582 aa16.26■□□□□ 0.19
HOXC4-201ENST00000303406 NUDT19A8MXV4 375 aa16.26■□□□□ 0.19
HOXC4-201ENST00000303406 KRBOX1C9JBD0 128 aa16.26■□□□□ 0.19
HOXC4-201ENST00000303406 MGST3O14880 152 aa16.26■□□□□ 0.19
HOXC4-201ENST00000303406 TNFSF12O43508 249 aa16.26■□□□□ 0.19
HOXC4-201ENST00000303406 SERPINE2P07093 398 aa16.26■□□□□ 0.19
HOXC4-201ENST00000303406 TMEM33P57088 247 aa16.26■□□□□ 0.19
HOXC4-201ENST00000303406 HTD2P86397 168 aa16.26■□□□□ 0.19
HOXC4-201ENST00000303406 ID3Q02535 119 aa16.26■□□□□ 0.19
HOXC4-201ENST00000303406 VHLLQ6RSH7 139 aa16.26■□□□□ 0.19
HOXC4-201ENST00000303406 MOGAT3Q86VF5 341 aa16.26■□□□□ 0.19
HOXC4-201ENST00000303406 FAM219AQ8IW50 185 aa16.26■□□□□ 0.19
HOXC4-201ENST00000303406 PRR18Q8N4B5 295 aa16.26■□□□□ 0.19
HOXC4-201ENST00000303406 UBAC2Q8NBM4 344 aa16.26■□□□□ 0.19
HOXC4-201ENST00000303406 ITLN1Q8WWA0 313 aa16.26■□□□□ 0.19
HOXC4-201ENST00000303406 RND1Q92730 232 aa16.26■□□□□ 0.19
HOXC4-201ENST00000303406 FAM212BQ9NTI7 297 aaPredicted RBP16.26■□□□□ 0.19
HOXC4-201ENST00000303406 RBM7Q9Y580 266 aaKnown RBP16.26■□□□□ 0.19
HOXC4-201ENST00000303406 LOC400499M0QZD8 3231 aa16.26■□□□□ 0.19
HOXC4-201ENST00000303406 SPRY3O43610 288 aa16.25■□□□□ 0.19
HOXC4-201ENST00000303406 PITX3O75364 302 aa16.25■□□□□ 0.19
HOXC4-201ENST00000303406 FAM87AP0C7U9 286 aa16.25■□□□□ 0.19
HOXC4-201ENST00000303406 PRR30Q53SZ7 412 aaPredicted RBP16.25■□□□□ 0.19
HOXC4-201ENST00000303406 RPL7L1Q6DKI1 246 aaKnown RBP16.25■□□□□ 0.19
HOXC4-201ENST00000303406 TCTEX1D1Q8N7M0 179 aa16.25■□□□□ 0.19
HOXC4-201ENST00000303406 NINJ1Q92982 152 aa16.25■□□□□ 0.19
HOXC4-201ENST00000303406 APC2O95996 2303 aa16.25■□□□□ 0.19
HOXC4-201ENST00000303406 SPINT2O43291 252 aa16.24■□□□□ 0.19
HOXC4-201ENST00000303406 IGHV1-46P01743 117 aa16.24■□□□□ 0.19
HOXC4-201ENST00000303406 THBDP07204 575 aa16.24■□□□□ 0.19
HOXC4-201ENST00000303406 CD55P08174 381 aa16.24■□□□□ 0.19
HOXC4-201ENST00000303406 OR8U9P0C7N5 309 aa16.24■□□□□ 0.19
HOXC4-201ENST00000303406 TNFAIP6P98066 277 aaPredicted RBP16.24■□□□□ 0.19
HOXC4-201ENST00000303406 DRAM1Q8N682 238 aa16.24■□□□□ 0.19
HOXC4-201ENST00000303406 GALNT11Q8NCW6 608 aa16.24■□□□□ 0.19
HOXC4-201ENST00000303406 OR8U1Q8NH10 309 aa16.24■□□□□ 0.19
HOXC4-201ENST00000303406 SAT2Q96F10 170 aaPredicted RBP16.24■□□□□ 0.19
HOXC4-201ENST00000303406 RNF7Q9UBF6 113 aa16.24■□□□□ 0.19
HOXC4-201ENST00000303406 KCNS2Q9ULS6 477 aa16.24■□□□□ 0.19
HOXC4-201ENST00000303406 PTPRZ1P23471 2315 aaPredicted RBP16.24■□□□□ 0.19
HOXC4-201ENST00000303406 PRR14LQ5THK1 2151 aa16.24■□□□□ 0.19
HOXC4-201ENST00000303406 CUL9Q8IWT3 2517 aa16.24■□□□□ 0.19
HOXC4-201ENST00000303406 DPRXA6NFQ7 191 aa16.24■□□□□ 0.19
HOXC4-201ENST00000303406 C15orf65H3BRN8 121 aa16.24■□□□□ 0.19
HOXC4-201ENST00000303406 FAM157CP0CG43 387 aa16.24■□□□□ 0.19
HOXC4-201ENST00000303406 GZMHP20718 246 aa16.24■□□□□ 0.19
HOXC4-201ENST00000303406 GLIPR1P48060 266 aa16.24■□□□□ 0.19
HOXC4-201ENST00000303406 EIF4EBP1Q13541 118 aaPredicted RBP16.24■□□□□ 0.19
HOXC4-201ENST00000303406 WFDC8Q8IUA0 241 aa16.24■□□□□ 0.19
HOXC4-201ENST00000303406 OR13A1Q8NGR1 328 aa16.24■□□□□ 0.19
HOXC4-201ENST00000303406 OR51H1Q8NH63 302 aa16.24■□□□□ 0.19
HOXC4-201ENST00000303406 MRGPRDQ8TDS7 321 aa16.24■□□□□ 0.19
HOXC4-201ENST00000303406 GPHA2Q96T91 129 aa16.24■□□□□ 0.19
HOXC4-201ENST00000303406 NGBQ9NPG2 151 aa16.24■□□□□ 0.19
HOXC4-201ENST00000303406 OR2S2Q9NQN1 319 aa16.24■□□□□ 0.19
HOXC4-201ENST00000303406 BORCS7-ASMTA0A0B4J1R7 106 aa16.23■□□□□ 0.19
HOXC4-201ENST00000303406 RAB19A4D1S5 217 aa16.23■□□□□ 0.19
HOXC4-201ENST00000303406 K7N7A8 449 aa16.23■□□□□ 0.19
HOXC4-201ENST00000303406 UQCC3Q6UW78 93 aa16.23■□□□□ 0.19
HOXC4-201ENST00000303406 OR2C3Q8N628 320 aa16.23■□□□□ 0.19
HOXC4-201ENST00000303406 TMED6Q8WW62 240 aa16.23■□□□□ 0.19
HOXC4-201ENST00000303406 GPR146Q96CH1 333 aa16.23■□□□□ 0.19
HOXC4-201ENST00000303406 SLC25A31Q9H0C2 315 aa16.23■□□□□ 0.19
HOXC4-201ENST00000303406 PARP12Q9H0J9 701 aaKnown RBP16.23■□□□□ 0.19
HOXC4-201ENST00000303406 RAB9BQ9NP90 201 aa16.23■□□□□ 0.19
HOXC4-201ENST00000303406 PPP1R3CQ9UQK1 317 aa16.23■□□□□ 0.19
HOXC4-201ENST00000303406 RAXQ9Y2V3 346 aa16.23■□□□□ 0.19
HOXC4-201ENST00000303406 FRYQ5TBA9 3013 aa16.23■□□□□ 0.19
HOXC4-201ENST00000303406 ODAMA1E959 279 aa16.22■□□□□ 0.19
HOXC4-201ENST00000303406 HOXA4Q00056 320 aaPredicted RBP16.22■□□□□ 0.19
HOXC4-201ENST00000303406 SPRNQ5BIV9 151 aa16.22■□□□□ 0.19
HOXC4-201ENST00000303406 ZNF561Q8N587 486 aa16.22■□□□□ 0.19
HOXC4-201ENST00000303406 OR52L2PQ8NGH6 319 aa16.22■□□□□ 0.19
HOXC4-201ENST00000303406 ARL11Q969Q4 196 aa16.22■□□□□ 0.19
HOXC4-201ENST00000303406 SDSLQ96GA7 329 aa16.22■□□□□ 0.19
HOXC4-201ENST00000303406 GCM1Q9NP62 436 aa16.22■□□□□ 0.19
HOXC4-201ENST00000303406 LYRM2Q9NU23 88 aaPredicted RBP16.22■□□□□ 0.19
HOXC4-201ENST00000303406 JPT1Q9UK76 154 aa16.22■□□□□ 0.19
HOXC4-201ENST00000303406 VSTM5A8MXK1 200 aa16.21■□□□□ 0.19
HOXC4-201ENST00000303406 ABCD4O14678 606 aa16.21■□□□□ 0.19
HOXC4-201ENST00000303406 SULT1A2P50226 295 aa16.21■□□□□ 0.19
HOXC4-201ENST00000303406 CASP6P55212 293 aa16.21■□□□□ 0.19
HOXC4-201ENST00000303406 POLR2GP62487 172 aaKnown RBP eCLIP16.21■□□□□ 0.19
HOXC4-201ENST00000303406 VAMP2P63027 116 aa16.21■□□□□ 0.19
HOXC4-201ENST00000303406 BAXQ07812 192 aa16.21■□□□□ 0.19
HOXC4-201ENST00000303406 KLRB1Q12918 225 aa16.21■□□□□ 0.19
HOXC4-201ENST00000303406 CATR1Q13166 79 aa16.21■□□□□ 0.19
HOXC4-201ENST00000303406 ZNF585BQ52M93 769 aa16.21■□□□□ 0.19
HOXC4-201ENST00000303406 ZNF66Q6ZN08 573 aa16.21■□□□□ 0.19
HOXC4-201ENST00000303406 UBALD1Q8TB05 177 aa16.21■□□□□ 0.19
HOXC4-201ENST00000303406 EDARADDQ8WWZ3 215 aa16.21■□□□□ 0.19
HOXC4-201ENST00000303406 SMIM8Q96KF7 97 aa16.21■□□□□ 0.19
HOXC4-201ENST00000303406 LPAR3Q9UBY5 353 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms