RNA–Protein interactions for RNA: ENST00000295688.7

CCT3-201, Transcript of chaperonin containing TCP1 subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCT3, Length 2,150 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCT3-201ENST00000295688 APLNRP35414 380 aa12.62□□□□□ -0.39
CCT3-201ENST00000295688 TSPAN7P41732 249 aa12.62□□□□□ -0.39
CCT3-201ENST00000295688 Q0VFX4 171 aa12.62□□□□□ -0.39
CCT3-201ENST00000295688 SSPNQ14714 243 aa12.62□□□□□ -0.39
CCT3-201ENST00000295688 OR10D4PQ8NGN7 298 aa12.62□□□□□ -0.39
CCT3-201ENST00000295688 LIN7CQ9NUP9 197 aaKnown RBP12.62□□□□□ -0.39
CCT3-201ENST00000295688 LRFN1Q9P244 771 aa12.62□□□□□ -0.39
CCT3-201ENST00000295688 TRBV24-1A0A075B6N3 115 aa12.62□□□□□ -0.39
CCT3-201ENST00000295688 A0A096LPE4 126 aa12.62□□□□□ -0.39
CCT3-201ENST00000295688 A0A1W2PPZ6 126 aa12.62□□□□□ -0.39
CCT3-201ENST00000295688 H3BP45 60 aa12.62□□□□□ -0.39
CCT3-201ENST00000295688 HS3ST1O14792 307 aa12.62□□□□□ -0.39
CCT3-201ENST00000295688 CFIP05156 583 aa12.62□□□□□ -0.39
CCT3-201ENST00000295688 TMEM41BQ5BJD5 291 aa12.62□□□□□ -0.39
CCT3-201ENST00000295688 OR2T2Q6IF00 324 aa12.62□□□□□ -0.39
CCT3-201ENST00000295688 ZNF295-AS1Q8N0V1 137 aa12.62□□□□□ -0.39
CCT3-201ENST00000295688 STRADBQ9C0K7 418 aa12.62□□□□□ -0.39
CCT3-201ENST00000295688 DLL3Q9NYJ7 618 aa12.62□□□□□ -0.39
CCT3-201ENST00000295688 B4GALT7Q9UBV7 327 aa12.62□□□□□ -0.39
CCT3-201ENST00000295688 CACNG5Q9UF02 275 aa12.62□□□□□ -0.39
CCT3-201ENST00000295688 TRAV24A0A0B4J272 114 aa12.61□□□□□ -0.39
CCT3-201ENST00000295688 OR5H1A6NKK0 313 aa12.61□□□□□ -0.39
CCT3-201ENST00000295688 FAM90A26D6RGX4 464 aa12.61□□□□□ -0.39
CCT3-201ENST00000295688 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP12.61□□□□□ -0.39
CCT3-201ENST00000295688 PKIAP61925 76 aa12.61□□□□□ -0.39
CCT3-201ENST00000295688 C20orf204Q6ZNR8 217 aa12.61□□□□□ -0.39
CCT3-201ENST00000295688 LILRB2Q8N423 598 aa12.61□□□□□ -0.39
CCT3-201ENST00000295688 CA5BP1Q8WTZ4 195 aa12.61□□□□□ -0.39
CCT3-201ENST00000295688 RDH5Q92781 318 aa12.61□□□□□ -0.39
CCT3-201ENST00000295688 POM121L2Q96KW2 1035 aa12.61□□□□□ -0.39
CCT3-201ENST00000295688 RSG1Q9BU20 258 aa12.61□□□□□ -0.39
CCT3-201ENST00000295688 PRRG4Q9BZD6 226 aa12.61□□□□□ -0.39
CCT3-201ENST00000295688 ZNF552Q9H707 407 aaPredicted RBP12.61□□□□□ -0.39
CCT3-201ENST00000295688 PRDM6Q9NQX0 595 aa12.61□□□□□ -0.39
CCT3-201ENST00000295688 CRIM1Q9NZV1 1036 aa12.61□□□□□ -0.39
CCT3-201ENST00000295688 RNF212BA8MTL3 300 aa12.6□□□□□ -0.39
CCT3-201ENST00000295688 TRGC1P0CF51 173 aa12.6□□□□□ -0.39
CCT3-201ENST00000295688 FOSL1P15407 271 aa12.6□□□□□ -0.39
CCT3-201ENST00000295688 SLC23A3Q6PIS1 610 aa12.6□□□□□ -0.39
CCT3-201ENST00000295688 LCN15Q6UWW0 184 aa12.6□□□□□ -0.39
CCT3-201ENST00000295688 OR5R1Q8NH85 324 aa12.6□□□□□ -0.39
CCT3-201ENST00000295688 ABHD5Q8WTS1 349 aa12.6□□□□□ -0.39
CCT3-201ENST00000295688 FAM173AQ9BQD7 235 aa12.6□□□□□ -0.39
CCT3-201ENST00000295688 ZNF665Q9H7R5 613 aa12.6□□□□□ -0.39
CCT3-201ENST00000295688 TIMM9Q9Y5J7 89 aa12.6□□□□□ -0.39
CCT3-201ENST00000295688 CNTRLQ7Z7A1 2325 aa12.6□□□□□ -0.39
CCT3-201ENST00000295688 PINLYPA6NC86 204 aa12.6□□□□□ -0.39
CCT3-201ENST00000295688 METTL15P1P0C7V9 234 aa12.6□□□□□ -0.39
CCT3-201ENST00000295688 CCL2P13500 99 aa12.6□□□□□ -0.39
CCT3-201ENST00000295688 DCAF12Q5T6F0 453 aa12.6□□□□□ -0.39
CCT3-201ENST00000295688 C9orf135Q5VTT2 229 aa12.6□□□□□ -0.39
CCT3-201ENST00000295688 Q6ZRM9 215 aa12.6□□□□□ -0.39
CCT3-201ENST00000295688 TUSC5Q8IXB3 177 aa12.6□□□□□ -0.39
CCT3-201ENST00000295688 GPR61Q9BZJ8 451 aa12.6□□□□□ -0.39
CCT3-201ENST00000295688 WDR61Q9GZS3 305 aaKnown RBP12.6□□□□□ -0.39
CCT3-201ENST00000295688 MKRN2OSH3BPM6 223 aa12.59□□□□□ -0.39
CCT3-201ENST00000295688 IAPPP10997 89 aa12.59□□□□□ -0.39
CCT3-201ENST00000295688 LHX2P50458 406 aa12.59□□□□□ -0.39
CCT3-201ENST00000295688 APH1AQ96BI3 265 aa12.59□□□□□ -0.39
CCT3-201ENST00000295688 AGMATQ9BSE5 352 aa12.59□□□□□ -0.39
CCT3-201ENST00000295688 OR14J1Q9UGF5 321 aa12.59□□□□□ -0.39
CCT3-201ENST00000295688 NAT8Q9UHE5 227 aa12.59□□□□□ -0.39
CCT3-201ENST00000295688 RBM7Q9Y580 266 aaKnown RBP12.59□□□□□ -0.39
CCT3-201ENST00000295688 LAMA1P25391 3075 aa12.59□□□□□ -0.39
CCT3-201ENST00000295688 CEBPZOSA8MTT3 80 aa12.59□□□□□ -0.39
CCT3-201ENST00000295688 J3QT63 122 aa12.59□□□□□ -0.39
CCT3-201ENST00000295688 CER1O95813 267 aa12.59□□□□□ -0.39
CCT3-201ENST00000295688 NGFP01138 241 aa12.59□□□□□ -0.39
CCT3-201ENST00000295688 IGKV1-39P01597 117 aa12.59□□□□□ -0.39
CCT3-201ENST00000295688 IGKV1D-39P04432 117 aa12.59□□□□□ -0.39
CCT3-201ENST00000295688 RD3LP0DJH9 198 aa12.59□□□□□ -0.39
CCT3-201ENST00000295688 CEACAM6P40199 344 aa12.59□□□□□ -0.39
CCT3-201ENST00000295688 ZNF726P1Q15940 193 aa12.59□□□□□ -0.39
CCT3-201ENST00000295688 Q8IYB0 196 aa12.59□□□□□ -0.39
CCT3-201ENST00000295688 IL1F10Q8WWZ1 152 aa12.59□□□□□ -0.39
CCT3-201ENST00000295688 FRZBQ92765 325 aa12.59□□□□□ -0.39
CCT3-201ENST00000295688 CDH20Q9HBT6 801 aa12.59□□□□□ -0.39
CCT3-201ENST00000295688 TMEM9BQ9NQ34 198 aa12.59□□□□□ -0.39
CCT3-201ENST00000295688 SLC39A9Q9NUM3 307 aa12.59□□□□□ -0.39
CCT3-201ENST00000295688 PITPNC1Q9UKF7 332 aa12.59□□□□□ -0.39
CCT3-201ENST00000295688 TRIOO75962 3097 aa12.59□□□□□ -0.39
CCT3-201ENST00000295688 MAP1LC3B2A6NCE7 125 aa12.58□□□□□ -0.4
CCT3-201ENST00000295688 IGKV1-5P01602 117 aa12.58□□□□□ -0.4
CCT3-201ENST00000295688 SRYQ05066 204 aa12.58□□□□□ -0.4
CCT3-201ENST00000295688 ATP6V1FQ16864 119 aa12.58□□□□□ -0.4
CCT3-201ENST00000295688 LBHQ53QV2 105 aaPredicted RBP12.58□□□□□ -0.4
CCT3-201ENST00000295688 GFI1BQ5VTD9 330 aa12.58□□□□□ -0.4
CCT3-201ENST00000295688 C6orf15Q6UXA7 325 aaPredicted RBP12.58□□□□□ -0.4
CCT3-201ENST00000295688 OR2M7Q8NG81 312 aa12.58□□□□□ -0.4
CCT3-201ENST00000295688 RNASEH2CQ8TDP1 164 aaKnown RBP12.58□□□□□ -0.4
CCT3-201ENST00000295688 MAP1LC3BQ9GZQ8 125 aa12.58□□□□□ -0.4
CCT3-201ENST00000295688 CLDN18P56856 261 aa12.57□□□□□ -0.4
CCT3-201ENST00000295688 ARL16Q0P5N6 197 aa12.57□□□□□ -0.4
CCT3-201ENST00000295688 GAMTQ14353 236 aa12.57□□□□□ -0.4
CCT3-201ENST00000295688 TESK1Q15569 626 aa12.57□□□□□ -0.4
CCT3-201ENST00000295688 Q6P435 159 aa12.57□□□□□ -0.4
CCT3-201ENST00000295688 TAF15Q92804 592 aaKnown RBP eCLIP12.57□□□□□ -0.4
CCT3-201ENST00000295688 ZNF488Q96MN9 340 aa12.57□□□□□ -0.4
CCT3-201ENST00000295688 OR51I2Q9H344 312 aa12.57□□□□□ -0.4
CCT3-201ENST00000295688 VSIRQ9H7M9 311 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms