RNA–Protein interactions for RNA: ENST00000263708.6

PTPN4-201, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN4, Length 10,300 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-201ENST00000263708 FCGR3AP08637 254 aa10□□□□□ -0.81
PTPN4-201ENST00000263708 CX3CL1P78423 397 aa10□□□□□ -0.81
PTPN4-201ENST00000263708 OR8D4Q8NGM9 314 aa10□□□□□ -0.81
PTPN4-201ENST00000263708 PLPP3O14495 311 aa10□□□□□ -0.81
PTPN4-201ENST00000263708 HYPMO75409 117 aa10□□□□□ -0.81
PTPN4-201ENST00000263708 GPX1P07203 203 aa10□□□□□ -0.81
PTPN4-201ENST00000263708 RPL31P62899 125 aaKnown RBP10□□□□□ -0.81
PTPN4-201ENST00000263708 COL10A1Q03692 680 aa10□□□□□ -0.81
PTPN4-201ENST00000263708 CENPVQ7Z7K6 275 aaPredicted RBP10□□□□□ -0.81
PTPN4-201ENST00000263708 CADM4Q8NFZ8 388 aa10□□□□□ -0.81
PTPN4-201ENST00000263708 COL25A1Q9BXS0 654 aaPredicted RBP10□□□□□ -0.81
PTPN4-201ENST00000263708 ZBTB42B2RXF5 422 aa10□□□□□ -0.81
PTPN4-201ENST00000263708 SFTPCP11686 197 aa10□□□□□ -0.81
PTPN4-201ENST00000263708 OTX1P32242 354 aaPredicted RBP10□□□□□ -0.81
PTPN4-201ENST00000263708 MFAP2P55001 183 aa10□□□□□ -0.81
PTPN4-201ENST00000263708 INSL4Q14641 139 aa10□□□□□ -0.81
PTPN4-201ENST00000263708 FAM74A3Q4VXF1 159 aa10□□□□□ -0.81
PTPN4-201ENST00000263708 FAM216AQ8WUB2 273 aa10□□□□□ -0.81
PTPN4-201ENST00000263708 LSM10Q969L4 123 aaKnown RBP10□□□□□ -0.81
PTPN4-201ENST00000263708 MAP1LC3AQ9H492 121 aa10□□□□□ -0.81
PTPN4-201ENST00000263708 B4DEV8 164 aa10□□□□□ -0.81
PTPN4-201ENST00000263708 TSPAN2O60636 221 aa10□□□□□ -0.81
PTPN4-201ENST00000263708 SLC25A1P53007 311 aa10□□□□□ -0.81
PTPN4-201ENST00000263708 CEACAM5P06731 702 aa9.99□□□□□ -0.81
PTPN4-201ENST00000263708 C10orf128Q5T292 105 aa9.99□□□□□ -0.81
PTPN4-201ENST00000263708 ZG16BQ96DA0 208 aa9.99□□□□□ -0.81
PTPN4-201ENST00000263708 FGF20Q9NP95 211 aaPredicted RBP9.99□□□□□ -0.81
PTPN4-201ENST00000263708 MALP21145 153 aa9.99□□□□□ -0.81
PTPN4-201ENST00000263708 GPR6P46095 362 aaPredicted RBP9.99□□□□□ -0.81
PTPN4-201ENST00000263708 SLC25A53Q5H9E4 307 aa9.99□□□□□ -0.81
PTPN4-201ENST00000263708 ANKRD33Q7Z3H0 272 aa9.99□□□□□ -0.81
PTPN4-201ENST00000263708 PRSS27Q9BQR3 290 aa9.99□□□□□ -0.81
PTPN4-201ENST00000263708 C2orf88Q9BSF0 95 aa9.99□□□□□ -0.81
PTPN4-201ENST00000263708 HDHD3Q9BSH5 251 aaPredicted RBP9.99□□□□□ -0.81
PTPN4-201ENST00000263708 RNF122Q9H9V4 155 aa9.99□□□□□ -0.81
PTPN4-201ENST00000263708 NTMQ9P121 344 aa9.99□□□□□ -0.81
PTPN4-201ENST00000263708 MPC1Q9Y5U8 109 aa9.99□□□□□ -0.81
PTPN4-201ENST00000263708 K7N7A8 449 aa9.99□□□□□ -0.81
PTPN4-201ENST00000263708 GAB4Q2WGN9 574 aa9.99□□□□□ -0.81
PTPN4-201ENST00000263708 COX19Q49B96 90 aa9.99□□□□□ -0.81
PTPN4-201ENST00000263708 IGSF11Q5DX21 431 aa9.99□□□□□ -0.81
PTPN4-201ENST00000263708 CEACAM18A8MTB9 384 aa9.99□□□□□ -0.81
PTPN4-201ENST00000263708 CDK2AP2O75956 126 aa9.99□□□□□ -0.81
PTPN4-201ENST00000263708 ZNF658BQ4V348 819 aaPredicted RBP9.99□□□□□ -0.81
PTPN4-201ENST00000263708 OVCH2Q7RTZ1 564 aa9.99□□□□□ -0.81
PTPN4-201ENST00000263708 ERASQ7Z444 233 aa9.99□□□□□ -0.81
PTPN4-201ENST00000263708 TEX29Q8N6K0 151 aa9.99□□□□□ -0.81
PTPN4-201ENST00000263708 ZNF275Q9NSD4 429 aaPredicted RBP9.99□□□□□ -0.81
PTPN4-201ENST00000263708 S1PR2O95136 353 aa9.99□□□□□ -0.81
PTPN4-201ENST00000263708 GABRG2P18507 467 aa9.99□□□□□ -0.81
PTPN4-201ENST00000263708 STARD6P59095 220 aa9.99□□□□□ -0.81
PTPN4-201ENST00000263708 ASB10Q8WXI3 467 aa9.99□□□□□ -0.81
PTPN4-201ENST00000263708 ANOS1P23352 680 aa9.99□□□□□ -0.81
PTPN4-201ENST00000263708 RGP1Q92546 391 aaPredicted RBP9.99□□□□□ -0.81
PTPN4-201ENST00000263708 C16orf97H3BN30 126 aa9.99□□□□□ -0.81
PTPN4-201ENST00000263708 P2RY1P47900 373 aa9.99□□□□□ -0.81
PTPN4-201ENST00000263708 PRSS54Q6PEW0 395 aa9.99□□□□□ -0.81
PTPN4-201ENST00000263708 OR10AC1Q8NH08 325 aa9.99□□□□□ -0.81
PTPN4-201ENST00000263708 SHISA4Q96DD7 197 aa9.99□□□□□ -0.81
PTPN4-201ENST00000263708 VSTM2LQ96N03 204 aa9.99□□□□□ -0.81
PTPN4-201ENST00000263708 IGHV3-72A0A0B4J1Y9 119 aa9.98□□□□□ -0.81
PTPN4-201ENST00000263708 PPM1DO15297 605 aa9.98□□□□□ -0.81
PTPN4-201ENST00000263708 TNFSF14O43557 240 aa9.98□□□□□ -0.81
PTPN4-201ENST00000263708 PKIAP61925 76 aa9.98□□□□□ -0.81
PTPN4-201ENST00000263708 LINC00470Q9BZP3 86 aa9.98□□□□□ -0.81
PTPN4-201ENST00000263708 SNRPD3P62318 126 aaKnown RBP9.98□□□□□ -0.81
PTPN4-201ENST00000263708 PIGYQ3MUY2 71 aa9.98□□□□□ -0.81
PTPN4-201ENST00000263708 PRELID3AQ96N28 172 aa9.98□□□□□ -0.81
PTPN4-201ENST00000263708 IL36RNQ9UBH0 155 aa9.98□□□□□ -0.81
PTPN4-201ENST00000263708 OPN4Q9UHM6 478 aa9.98□□□□□ -0.81
PTPN4-201ENST00000263708 SEC16AO15027 2179 aa9.98□□□□□ -0.81
PTPN4-201ENST00000263708 hCG_38984A0A1B0GV85 526 aa9.98□□□□□ -0.81
PTPN4-201ENST00000263708 STPG3Q8N7X2 389 aa9.98□□□□□ -0.81
PTPN4-201ENST00000263708 LHFPL5Q8TAF8 219 aa9.98□□□□□ -0.81
PTPN4-201ENST00000263708 GALNT14Q96FL9 552 aa9.98□□□□□ -0.81
PTPN4-201ENST00000263708 THY1P04216 161 aa9.98□□□□□ -0.81
PTPN4-201ENST00000263708 ZNF714Q96N38 554 aa9.98□□□□□ -0.81
PTPN4-201ENST00000263708 METTL1Q9UBP6 276 aaKnown RBP9.98□□□□□ -0.81
PTPN4-201ENST00000263708 MYOFQ9NZM1 2061 aa9.98□□□□□ -0.81
PTPN4-201ENST00000263708 SPTY2D1-AS1A0A0U1RR47 76 aa9.98□□□□□ -0.81
PTPN4-201ENST00000263708 SRD5A2P31213 254 aa9.98□□□□□ -0.81
PTPN4-201ENST00000263708 LRP10Q7Z4F1 713 aa9.98□□□□□ -0.81
PTPN4-201ENST00000263708 MRPL30Q8TCC3 161 aaKnown RBP9.98□□□□□ -0.81
PTPN4-201ENST00000263708 PHLDA1Q8WV24 401 aaPredicted RBP9.98□□□□□ -0.81
PTPN4-201ENST00000263708 YIPF6Q96EC8 236 aa9.98□□□□□ -0.81
PTPN4-201ENST00000263708 MS4A5Q9H3V2 200 aa9.98□□□□□ -0.81
PTPN4-201ENST00000263708 BCL2L10Q9HD36 194 aa9.98□□□□□ -0.81
PTPN4-201ENST00000263708 A0A0B4J2E0 115 aa9.98□□□□□ -0.81
PTPN4-201ENST00000263708 A0A1B0GTH9 108 aa9.98□□□□□ -0.81
PTPN4-201ENST00000263708 A0A1B0GX12 115 aa9.98□□□□□ -0.81
PTPN4-201ENST00000263708 PSG2P11465 335 aa9.98□□□□□ -0.81
PTPN4-201ENST00000263708 ZNF784Q8NCA9 323 aaPredicted RBP9.98□□□□□ -0.81
PTPN4-201ENST00000263708 ADAMTS17Q8TE56 1095 aa9.98□□□□□ -0.81
PTPN4-201ENST00000263708 STAG3L3P0CL85 134 aa9.98□□□□□ -0.81
PTPN4-201ENST00000263708 FAM106AQ4KMX7 169 aa9.98□□□□□ -0.81
PTPN4-201ENST00000263708 PRDX2P32119 198 aa9.98□□□□□ -0.81
PTPN4-201ENST00000263708 HCP5Q6MZN7 132 aa9.98□□□□□ -0.81
PTPN4-201ENST00000263708 SH2D5Q6ZV89 423 aa9.98□□□□□ -0.81
PTPN4-201ENST00000263708 PRSS42Q7Z5A4 293 aa9.98□□□□□ -0.81
PTPN4-201ENST00000263708 CXCL16Q9H2A7 254 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms