RNA–Protein interactions for RNA: ENST00000253754.7

PDLIM4-201, Transcript of PDZ and LIM domain 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM4, Length 2,282 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-201ENST00000253754 FAM87AP0C7U9 286 aa15.78■□□□□ 0.12
PDLIM4-201ENST00000253754 VDAC1P21796 283 aa15.78■□□□□ 0.12
PDLIM4-201ENST00000253754 ZNF146Q15072 292 aa15.78■□□□□ 0.12
PDLIM4-201ENST00000253754 SWI5Q1ZZU3 235 aa15.78■□□□□ 0.12
PDLIM4-201ENST00000253754 PRAMEF6Q5VXH4 476 aa15.78■□□□□ 0.12
PDLIM4-201ENST00000253754 SVBPQ8N300 66 aa15.78■□□□□ 0.12
PDLIM4-201ENST00000253754 OR10V1Q8NGI7 309 aa15.78■□□□□ 0.12
PDLIM4-201ENST00000253754 SPIN2AQ99865 258 aa15.78■□□□□ 0.12
PDLIM4-201ENST00000253754 SPIN2BQ9BPZ2 258 aa15.78■□□□□ 0.12
PDLIM4-201ENST00000253754 PPP1R3CQ9UQK1 317 aa15.78■□□□□ 0.12
PDLIM4-201ENST00000253754 SPP1P10451 314 aa15.77■□□□□ 0.12
PDLIM4-201ENST00000253754 FABP6P51161 128 aa15.77■□□□□ 0.12
PDLIM4-201ENST00000253754 C10orf91Q5T1B1 145 aa15.77■□□□□ 0.12
PDLIM4-201ENST00000253754 FAM53AQ6NSI3 398 aaPredicted RBP15.77■□□□□ 0.12
PDLIM4-201ENST00000253754 ESRP2Q9H6T0 727 aaKnown RBP15.77■□□□□ 0.12
PDLIM4-201ENST00000253754 MSL2Q9HCI7 577 aa15.77■□□□□ 0.12
PDLIM4-201ENST00000253754 TAAR3PQ9P1P4 343 aa15.77■□□□□ 0.12
PDLIM4-201ENST00000253754 PURGQ9UJV8 347 aaKnown RBP15.77■□□□□ 0.12
PDLIM4-201ENST00000253754 RNASEK-C17orf49H0YIS7 233 aa15.77■□□□□ 0.11
PDLIM4-201ENST00000253754 HSPA12AO43301 675 aa15.77■□□□□ 0.11
PDLIM4-201ENST00000253754 NDUFA2O43678 99 aa15.77■□□□□ 0.11
PDLIM4-201ENST00000253754 HAND1O96004 215 aa15.77■□□□□ 0.11
PDLIM4-201ENST00000253754 CD80P33681 288 aa15.77■□□□□ 0.11
PDLIM4-201ENST00000253754 MDH2P40926 338 aaKnown RBP15.77■□□□□ 0.11
PDLIM4-201ENST00000253754 F2RL1P55085 397 aa15.77■□□□□ 0.11
PDLIM4-201ENST00000253754 ZNF616Q08AN1 781 aa15.77■□□□□ 0.11
PDLIM4-201ENST00000253754 Q6ZR03 302 aa15.77■□□□□ 0.11
PDLIM4-201ENST00000253754 ODF3L1Q8IXM7 274 aa15.77■□□□□ 0.11
PDLIM4-201ENST00000253754 C11orf53Q8IXP5 236 aa15.77■□□□□ 0.11
PDLIM4-201ENST00000253754 TMEM171Q8WVE6 324 aa15.77■□□□□ 0.11
PDLIM4-201ENST00000253754 FAM212BQ9NTI7 297 aaPredicted RBP15.77■□□□□ 0.11
PDLIM4-201ENST00000253754 SH2D1BO14796 132 aa15.76■□□□□ 0.11
PDLIM4-201ENST00000253754 ALKBH2Q6NS38 261 aa15.76■□□□□ 0.11
PDLIM4-201ENST00000253754 SEM1Q6ZVN7 128 aa15.76■□□□□ 0.11
PDLIM4-201ENST00000253754 CISD2Q8N5K1 135 aaKnown RBP15.76■□□□□ 0.11
PDLIM4-201ENST00000253754 OR8G5Q8NG78 346 aa15.76■□□□□ 0.11
PDLIM4-201ENST00000253754 OR10Z1Q8NGY1 313 aa15.76■□□□□ 0.11
PDLIM4-201ENST00000253754 STARD4Q96DR4 205 aa15.76■□□□□ 0.11
PDLIM4-201ENST00000253754 UFSP2Q9NUQ7 469 aa15.76■□□□□ 0.11
PDLIM4-201ENST00000253754 KCNS2Q9ULS6 477 aa15.76■□□□□ 0.11
PDLIM4-201ENST00000253754 CARHSP1Q9Y2V2 147 aaKnown RBP15.76■□□□□ 0.11
PDLIM4-201ENST00000253754 CLEC18AA5D8T8 446 aa15.75■□□□□ 0.11
PDLIM4-201ENST00000253754 CST7O76096 145 aa15.75■□□□□ 0.11
PDLIM4-201ENST00000253754 CNOT4O95628 575 aaKnown RBP15.75■□□□□ 0.11
PDLIM4-201ENST00000253754 SFTA3P0C7M3 94 aa15.75■□□□□ 0.11
PDLIM4-201ENST00000253754 SEC11BP0C7V7 166 aa15.75■□□□□ 0.11
PDLIM4-201ENST00000253754 DANCRP0C864 163 aa15.75■□□□□ 0.11
PDLIM4-201ENST00000253754 UCNP55089 124 aa15.75■□□□□ 0.11
PDLIM4-201ENST00000253754 MIDNQ504T8 468 aa15.75■□□□□ 0.11
PDLIM4-201ENST00000253754 UNQ6494/PRO21346Q6UXR6 183 aa15.75■□□□□ 0.11
PDLIM4-201ENST00000253754 CBLN2Q8IUK8 224 aa15.75■□□□□ 0.11
PDLIM4-201ENST00000253754 TMEM252Q8N6L7 170 aa15.75■□□□□ 0.11
PDLIM4-201ENST00000253754 Q8NA96 180 aa15.75■□□□□ 0.11
PDLIM4-201ENST00000253754 CLEC18CQ8NCF0 446 aa15.75■□□□□ 0.11
PDLIM4-201ENST00000253754 LYRM2Q9NU23 88 aaPredicted RBP15.75■□□□□ 0.11
PDLIM4-201ENST00000253754 TREM2Q9NZC2 230 aa15.75■□□□□ 0.11
PDLIM4-201ENST00000253754 A6NLC8 198 aa15.75■□□□□ 0.11
PDLIM4-201ENST00000253754 ATP6V1G2-DDX39BF2Z307 99 aa15.75■□□□□ 0.11
PDLIM4-201ENST00000253754 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP15.75■□□□□ 0.11
PDLIM4-201ENST00000253754 TIMM8AO60220 97 aaPredicted RBP15.75■□□□□ 0.11
PDLIM4-201ENST00000253754 IGKV1-39P01597 117 aa15.75■□□□□ 0.11
PDLIM4-201ENST00000253754 IGKV1D-39P04432 117 aa15.75■□□□□ 0.11
PDLIM4-201ENST00000253754 SERPINE2P07093 398 aa15.75■□□□□ 0.11
PDLIM4-201ENST00000253754 NPBWR1P48145 328 aa15.75■□□□□ 0.11
PDLIM4-201ENST00000253754 ID3Q02535 119 aa15.75■□□□□ 0.11
PDLIM4-201ENST00000253754 KRTCAP3Q53RY4 240 aa15.75■□□□□ 0.11
PDLIM4-201ENST00000253754 TMEM217Q8N7C4 229 aa15.75■□□□□ 0.11
PDLIM4-201ENST00000253754 GPR146Q96CH1 333 aa15.75■□□□□ 0.11
PDLIM4-201ENST00000253754 PLSCR4Q9NRQ2 329 aa15.75■□□□□ 0.11
PDLIM4-201ENST00000253754 RBM7Q9Y580 266 aaKnown RBP15.75■□□□□ 0.11
PDLIM4-201ENST00000253754 A0A1B0GV50 99 aa15.74■□□□□ 0.11
PDLIM4-201ENST00000253754 MEX3AA1L020 520 aaKnown RBP15.74■□□□□ 0.11
PDLIM4-201ENST00000253754 NPIPB11E5RHQ5 1161 aa15.74■□□□□ 0.11
PDLIM4-201ENST00000253754 CHST1O43916 411 aa15.74■□□□□ 0.11
PDLIM4-201ENST00000253754 PVALBP20472 110 aaPredicted RBP15.74■□□□□ 0.11
PDLIM4-201ENST00000253754 VAMP2P63027 116 aa15.74■□□□□ 0.11
PDLIM4-201ENST00000253754 TMEM182Q6ZP80 229 aaPredicted RBP15.74■□□□□ 0.11
PDLIM4-201ENST00000253754 MOB1BQ7L9L4 216 aa15.74■□□□□ 0.11
PDLIM4-201ENST00000253754 RPRMLQ8N4K4 120 aa15.74■□□□□ 0.11
PDLIM4-201ENST00000253754 LYPD6BQ8NI32 183 aa15.74■□□□□ 0.11
PDLIM4-201ENST00000253754 HES4Q9HCC6 221 aa15.74■□□□□ 0.11
PDLIM4-201ENST00000253754 MBNL3Q9NUK0 354 aaKnown RBP15.74■□□□□ 0.11
PDLIM4-201ENST00000253754 IGHV1-18A0A0C4DH31 117 aa15.74■□□□□ 0.11
PDLIM4-201ENST00000253754 DUXBA0A1W2PPF3 345 aa15.74■□□□□ 0.11
PDLIM4-201ENST00000253754 TMEM210A6NLX4 147 aa15.74■□□□□ 0.11
PDLIM4-201ENST00000253754 CD5P06127 495 aa15.74■□□□□ 0.11
PDLIM4-201ENST00000253754 ZNF16P17020 682 aaPredicted RBP15.74■□□□□ 0.11
PDLIM4-201ENST00000253754 CEACAM6P40199 344 aa15.74■□□□□ 0.11
PDLIM4-201ENST00000253754 CAMLGP49069 296 aa15.74■□□□□ 0.11
PDLIM4-201ENST00000253754 Q6ZRM9 215 aa15.74■□□□□ 0.11
PDLIM4-201ENST00000253754 C1orf162Q8NEQ5 155 aaPredicted RBP15.74■□□□□ 0.11
PDLIM4-201ENST00000253754 ZCCHC14Q8WYQ9 949 aaKnown RBP15.74■□□□□ 0.11
PDLIM4-201ENST00000253754 SEC11CQ9BY50 192 aa15.74■□□□□ 0.11
PDLIM4-201ENST00000253754 PLEKHF2Q9H8W4 249 aa15.74■□□□□ 0.11
PDLIM4-201ENST00000253754 CACFD1Q9UGQ2 172 aa15.74■□□□□ 0.11
PDLIM4-201ENST00000253754 PROCRQ9UNN8 238 aa15.74■□□□□ 0.11
PDLIM4-201ENST00000253754 IGHV2OR16-5A0A0B4J2B6 119 aa15.73■□□□□ 0.11
PDLIM4-201ENST00000253754 FAM157AC9JC47 383 aa15.73■□□□□ 0.11
PDLIM4-201ENST00000253754 H3BP45 60 aa15.73■□□□□ 0.11
PDLIM4-201ENST00000253754 CGAP01215 116 aa15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms