RNA–Protein interactions for RNA: ENST00000224237.9

VIM-201, Transcript of vimentin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIM, Length 1,868 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-201ENST00000224237 LDLRAD3Q86YD5 345 aa15.12■□□□□ 0.01
VIM-201ENST00000224237 ZNF843Q8N446 348 aa15.12■□□□□ 0.01
VIM-201ENST00000224237 METTL8Q9H825 291 aaKnown RBP15.12■□□□□ 0.01
VIM-201ENST00000224237 CCL28Q9NRJ3 127 aa15.12■□□□□ 0.01
VIM-201ENST00000224237 PPIAL4AQ9Y536 164 aa15.12■□□□□ 0.01
VIM-201ENST00000224237 U3KQ87 197 aa15.12■□□□□ 0.01
VIM-201ENST00000224237 RAI1Q7Z5J4 1906 aaPredicted RBP15.12■□□□□ 0.01
VIM-201ENST00000224237 HSD17B6O14756 317 aa15.11■□□□□ 0.01
VIM-201ENST00000224237 SIGLEC5O15389 551 aa15.11■□□□□ 0.01
VIM-201ENST00000224237 SPINT2O43291 252 aa15.11■□□□□ 0.01
VIM-201ENST00000224237 SSTR5P35346 364 aa15.11■□□□□ 0.01
VIM-201ENST00000224237 EDDM3BP56851 147 aa15.11■□□□□ 0.01
VIM-201ENST00000224237 OR8H1Q8NGG4 311 aa15.11■□□□□ 0.01
VIM-201ENST00000224237 NINJ1Q92982 152 aa15.11■□□□□ 0.01
VIM-201ENST00000224237 ARL11Q969Q4 196 aa15.11■□□□□ 0.01
VIM-201ENST00000224237 SEC22AQ96IW7 307 aa15.11■□□□□ 0.01
VIM-201ENST00000224237 CCL13Q99616 98 aa15.11■□□□□ 0.01
VIM-201ENST00000224237 NMES1Q9C002 83 aa15.11■□□□□ 0.01
VIM-201ENST00000224237 TOLLIPQ9H0E2 274 aa15.11■□□□□ 0.01
VIM-201ENST00000224237 OR6C3Q9NZP0 311 aa15.11■□□□□ 0.01
VIM-201ENST00000224237 COMMD9Q9P000 198 aa15.11■□□□□ 0.01
VIM-201ENST00000224237 KIAA2026Q5HYC2 2103 aa15.11■□□□□ 0.01
VIM-201ENST00000224237 IGHV1-69-2A0A0G2JMI3 117 aa15.1■□□□□ 0.01
VIM-201ENST00000224237 ADAP1O75689 374 aa15.1■□□□□ 0.01
VIM-201ENST00000224237 HTR2BP41595 481 aa15.1■□□□□ 0.01
VIM-201ENST00000224237 CYCSP99999 105 aaKnown RBP15.1■□□□□ 0.01
VIM-201ENST00000224237 TBC1D26Q86UD7 250 aa15.1■□□□□ 0.01
VIM-201ENST00000224237 LRTM2Q8N967 370 aa15.1■□□□□ 0.01
VIM-201ENST00000224237 BVESQ8NE79 360 aa15.1■□□□□ 0.01
VIM-201ENST00000224237 HEXA-AS1Q9H8Q6 139 aa15.1■□□□□ 0.01
VIM-201ENST00000224237 RBM7Q9Y580 266 aaKnown RBP15.1■□□□□ 0.01
VIM-201ENST00000224237 MYO18BQ8IUG5 2567 aa15.1■□□□□ 0.01
VIM-201ENST00000224237 USP9XQ93008 2570 aaPredicted RBP15.1■□□□□ 0.01
VIM-201ENST00000224237 C3orf85A0A1B0GTC6 90 aa15.1■□□□□ 0.01
VIM-201ENST00000224237 C13orf42A0A1B0GVH6 325 aa15.1■□□□□ 0.01
VIM-201ENST00000224237 C15orf65H3BRN8 121 aa15.1■□□□□ 0.01
VIM-201ENST00000224237 PHF1O43189 567 aaPredicted RBP15.1■□□□□ 0.01
VIM-201ENST00000224237 TSC22D2O75157 780 aa15.1■□□□□ 0.01
VIM-201ENST00000224237 SELLP14151 372 aa15.1■□□□□ 0.01
VIM-201ENST00000224237 HTD2P86397 168 aa15.1■□□□□ 0.01
VIM-201ENST00000224237 SP6Q3SY56 376 aa15.1■□□□□ 0.01
VIM-201ENST00000224237 LIAT1Q6ZQX7 453 aa15.1■□□□□ 0.01
VIM-201ENST00000224237 C14orf79Q96F83 325 aa15.1■□□□□ 0.01
VIM-201ENST00000224237 HMSDA8MTL9 139 aa15.09■□□□□ 0.01
VIM-201ENST00000224237 TMPRSS2O15393 492 aa15.09■□□□□ 0.01
VIM-201ENST00000224237 HOXB5P09067 269 aa15.09■□□□□ 0.01
VIM-201ENST00000224237 SRPXP78539 464 aa15.09■□□□□ 0.01
VIM-201ENST00000224237 HFEQ30201 348 aa15.09■□□□□ 0.01
VIM-201ENST00000224237 FAM216BQ8N7L0 139 aa15.09■□□□□ 0.01
VIM-201ENST00000224237 GLYATL2Q8WU03 294 aa15.09■□□□□ 0.01
VIM-201ENST00000224237 PPP1R1CQ8WVI7 109 aa15.09■□□□□ 0.01
VIM-201ENST00000224237 MSI2Q96DH6 328 aaKnown RBP15.09■□□□□ 0.01
VIM-201ENST00000224237 AKR1E2Q96JD6 320 aa15.09■□□□□ 0.01
VIM-201ENST00000224237 RAB9BQ9NP90 201 aa15.09■□□□□ 0.01
VIM-201ENST00000224237 CBLN4Q9NTU7 201 aa15.09■□□□□ 0.01
VIM-201ENST00000224237 A0A1B0GW55 424 aa15.08■□□□□ 0.01
VIM-201ENST00000224237 DUX4L2P0CJ85 424 aa15.08■□□□□ 0.01
VIM-201ENST00000224237 DUX4L3P0CJ86 424 aa15.08■□□□□ 0.01
VIM-201ENST00000224237 DUX4L4P0CJ87 422 aa15.08■□□□□ 0.01
VIM-201ENST00000224237 DUX4L5P0CJ88 424 aa15.08■□□□□ 0.01
VIM-201ENST00000224237 DUX4L6P0CJ89 424 aa15.08■□□□□ 0.01
VIM-201ENST00000224237 DUX4L7P0CJ90 424 aa15.08■□□□□ 0.01
VIM-201ENST00000224237 RNF224P0DH78 156 aa15.08■□□□□ 0.01
VIM-201ENST00000224237 DUX4L9Q6RFH8 374 aaPredicted RBP15.08■□□□□ 0.01
VIM-201ENST00000224237 LGI3Q8N145 548 aa15.08■□□□□ 0.01
VIM-201ENST00000224237 ZNF680Q8NEM1 530 aa15.08■□□□□ 0.01
VIM-201ENST00000224237 OR52L2PQ8NGH6 319 aa15.08■□□□□ 0.01
VIM-201ENST00000224237 TP53RKQ96S44 253 aa15.08■□□□□ 0.01
VIM-201ENST00000224237 DCTN5Q9BTE1 182 aa15.08■□□□□ 0.01
VIM-201ENST00000224237 OR2S2Q9NQN1 319 aa15.08■□□□□ 0.01
VIM-201ENST00000224237 DUX4Q9UBX2 424 aa15.08■□□□□ 0.01
VIM-201ENST00000224237 TRAV14DV4A0A0A6YYC5 116 aa15.08■□□□□ 0
VIM-201ENST00000224237 IFNA21P01568 189 aa15.08■□□□□ 0
VIM-201ENST00000224237 TMEM222Q9H0R3 208 aa15.08■□□□□ 0
VIM-201ENST00000224237 SPTAN1Q13813 2472 aaKnown RBP15.07■□□□□ 0
VIM-201ENST00000224237 FXYD6-FXYD2A0A087WZ82 144 aa15.07■□□□□ 0
VIM-201ENST00000224237 MPTX1A8MV57 137 aa15.07■□□□□ 0
VIM-201ENST00000224237 PGLYRP1O75594 196 aaPredicted RBP15.07■□□□□ 0
VIM-201ENST00000224237 B3GALNT1O75752 331 aa15.07■□□□□ 0
VIM-201ENST00000224237 OR8U9P0C7N5 309 aa15.07■□□□□ 0
VIM-201ENST00000224237 IGFBP2P18065 325 aa15.07■□□□□ 0
VIM-201ENST00000224237 LRRC37A5PQ49AS3 106 aa15.07■□□□□ 0
VIM-201ENST00000224237 OR8U1Q8NH10 309 aa15.07■□□□□ 0
VIM-201ENST00000224237 C2orf50Q96LR7 162 aa15.07■□□□□ 0
VIM-201ENST00000224237 PARP12Q9H0J9 701 aaKnown RBP15.07■□□□□ 0
VIM-201ENST00000224237 JPT1Q9UK76 154 aa15.07■□□□□ 0
VIM-201ENST00000224237 KCNS2Q9ULS6 477 aa15.07■□□□□ 0
VIM-201ENST00000224237 COL12A1Q99715 3063 aa15.06■□□□□ 0
VIM-201ENST00000224237 TRGV10A0A0A0MS01 117 aa15.06■□□□□ 0
VIM-201ENST00000224237 A0A1W2PPR1 153 aa15.06■□□□□ 0
VIM-201ENST00000224237 H0Y980 276 aa15.06■□□□□ 0
VIM-201ENST00000224237 IFNA7P01567 189 aa15.06■□□□□ 0
VIM-201ENST00000224237 IGLV2-14P01704 120 aa15.06■□□□□ 0
VIM-201ENST00000224237 WNT2P09544 360 aa15.06■□□□□ 0
VIM-201ENST00000224237 GNMTQ14749 295 aa15.06■□□□□ 0
VIM-201ENST00000224237 C11orf87Q6NUJ2 197 aa15.06■□□□□ 0
VIM-201ENST00000224237 RFESDQ8TAC1 157 aa15.06■□□□□ 0
VIM-201ENST00000224237 C18orf12Q96KH6 178 aa15.06■□□□□ 0
VIM-201ENST00000224237 OR10C1Q96KK4 312 aa15.06■□□□□ 0
VIM-201ENST00000224237 RAB1BQ9H0U4 201 aa15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms