RNA–Protein interactions for RNA: ENST00000642041.1

PHGDH-234, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 943 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-234ENST00000642041 BSPH1Q075Z2 132 aa14.42□□□□□ -0.1
PHGDH-234ENST00000642041 SRSF4Q08170 494 aaKnown RBP14.42□□□□□ -0.1
PHGDH-234ENST00000642041 TMEM30BQ3MIR4 351 aa14.42□□□□□ -0.1
PHGDH-234ENST00000642041 AADACL3Q5VUY0 350 aa14.42□□□□□ -0.1
PHGDH-234ENST00000642041 ZNF660Q6AZW8 331 aaPredicted RBP14.42□□□□□ -0.1
PHGDH-234ENST00000642041 ZNF497Q6ZNH5 498 aa14.42□□□□□ -0.1
PHGDH-234ENST00000642041 C22orf34Q6ZV56 151 aa14.42□□□□□ -0.1
PHGDH-234ENST00000642041 MUC20Q8N307 709 aaPredicted RBP14.42□□□□□ -0.1
PHGDH-234ENST00000642041 OR11H7Q8NGC8 314 aa14.42□□□□□ -0.1
PHGDH-234ENST00000642041 KIRREL1Q96J84 757 aa14.42□□□□□ -0.1
PHGDH-234ENST00000642041 SNX22Q96L94 193 aa14.42□□□□□ -0.1
PHGDH-234ENST00000642041 SEC22CQ9BRL7 303 aa14.42□□□□□ -0.1
PHGDH-234ENST00000642041 SUCNR1Q9BXA5 334 aa14.42□□□□□ -0.1
PHGDH-234ENST00000642041 TMPRSS13Q9BYE2 586 aa14.42□□□□□ -0.1
PHGDH-234ENST00000642041 WDR13Q9H1Z4 485 aa14.42□□□□□ -0.1
PHGDH-234ENST00000642041 MSL2Q9HCI7 577 aa14.42□□□□□ -0.1
PHGDH-234ENST00000642041 RAB18Q9NP72 206 aa14.42□□□□□ -0.1
PHGDH-234ENST00000642041 COMMD9Q9P000 198 aa14.42□□□□□ -0.1
PHGDH-234ENST00000642041 DNAJB11Q9UBS4 358 aa14.42□□□□□ -0.1
PHGDH-234ENST00000642041 ZNF230Q9UIE0 474 aaPredicted RBP14.42□□□□□ -0.1
PHGDH-234ENST00000642041 VSIG4Q9Y279 399 aa14.42□□□□□ -0.1
PHGDH-234ENST00000642041 OOEPA6NGQ2 149 aa14.41□□□□□ -0.1
PHGDH-234ENST00000642041 H0YL77 283 aa14.41□□□□□ -0.1
PHGDH-234ENST00000642041 HS3ST1O14792 307 aa14.41□□□□□ -0.1
PHGDH-234ENST00000642041 MSMO1Q15800 293 aa14.41□□□□□ -0.1
PHGDH-234ENST00000642041 CMTM1Q8IZ96 169 aa14.41□□□□□ -0.1
PHGDH-234ENST00000642041 ZNF565Q8N9K5 539 aa14.41□□□□□ -0.1
PHGDH-234ENST00000642041 OR10J5Q8NHC4 309 aa14.41□□□□□ -0.1
PHGDH-234ENST00000642041 LRRC29Q8WV35 223 aa14.41□□□□□ -0.1
PHGDH-234ENST00000642041 GALNT14Q96FL9 552 aa14.41□□□□□ -0.1
PHGDH-234ENST00000642041 AKR1E2Q96JD6 320 aa14.41□□□□□ -0.1
PHGDH-234ENST00000642041 OR2V2Q96R30 315 aa14.41□□□□□ -0.1
PHGDH-234ENST00000642041 GON7Q9BXV9 100 aa14.41□□□□□ -0.1
PHGDH-234ENST00000642041 BEX2Q9BXY8 128 aa14.41□□□□□ -0.1
PHGDH-234ENST00000642041 MRPL37Q9BZE1 423 aaKnown RBP14.41□□□□□ -0.1
PHGDH-234ENST00000642041 FAM234AQ9H0X4 552 aa14.41□□□□□ -0.1
PHGDH-234ENST00000642041 MBNL3Q9NUK0 354 aaKnown RBP14.41□□□□□ -0.1
PHGDH-234ENST00000642041 TMEM160Q9NX00 188 aa14.41□□□□□ -0.1
PHGDH-234ENST00000642041 TRAPPC2LQ9UL33 140 aa14.41□□□□□ -0.1
PHGDH-234ENST00000642041 C17orf100A8MU93 164 aa14.4□□□□□ -0.1
PHGDH-234ENST00000642041 F8VVB4 439 aa14.4□□□□□ -0.1
PHGDH-234ENST00000642041 F8VWA3 439 aa14.4□□□□□ -0.1
PHGDH-234ENST00000642041 FSTL3O95633 263 aa14.4□□□□□ -0.1
PHGDH-234ENST00000642041 LHBP01229 141 aa14.4□□□□□ -0.1
PHGDH-234ENST00000642041 OR4A8P0C604 315 aa14.4□□□□□ -0.1
PHGDH-234ENST00000642041 AKR1C4P17516 323 aa14.4□□□□□ -0.1
PHGDH-234ENST00000642041 FCGR2CP31995 323 aa14.4□□□□□ -0.1
PHGDH-234ENST00000642041 RBMXP38159 391 aaKnown RBP14.4□□□□□ -0.1
PHGDH-234ENST00000642041 RND3P61587 244 aa14.4□□□□□ -0.1
PHGDH-234ENST00000642041 HLA-DRB3P79483 266 aa14.4□□□□□ -0.1
PHGDH-234ENST00000642041 SRSF2Q01130 221 aaKnown RBP14.4□□□□□ -0.1
PHGDH-234ENST00000642041 ESCO2Q56NI9 601 aa14.4□□□□□ -0.1
PHGDH-234ENST00000642041 VHLLQ6RSH7 139 aa14.4□□□□□ -0.1
PHGDH-234ENST00000642041 ZNF561Q8N587 486 aa14.4□□□□□ -0.1
PHGDH-234ENST00000642041 ZBTB34Q8NCN2 500 aa14.4□□□□□ -0.1
PHGDH-234ENST00000642041 MRPL30Q8TCC3 161 aaKnown RBP14.4□□□□□ -0.1
PHGDH-234ENST00000642041 RDH5Q92781 318 aa14.4□□□□□ -0.1
PHGDH-234ENST00000642041 PLPPR2Q96GM1 343 aa14.4□□□□□ -0.1
PHGDH-234ENST00000642041 CABLES2Q9BTV7 478 aa14.4□□□□□ -0.1
PHGDH-234ENST00000642041 BEX1Q9HBH7 125 aa14.4□□□□□ -0.1
PHGDH-234ENST00000642041 RNF115Q9Y4L5 304 aa14.4□□□□□ -0.1
PHGDH-234ENST00000642041 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP14.39□□□□□ -0.11
PHGDH-234ENST00000642041 OR5H14A6NHG9 310 aa14.39□□□□□ -0.11
PHGDH-234ENST00000642041 HMSDA8MTL9 139 aa14.39□□□□□ -0.11
PHGDH-234ENST00000642041 SDCBPO00560 298 aaPredicted RBP14.39□□□□□ -0.11
PHGDH-234ENST00000642041 MGST3O14880 152 aa14.39□□□□□ -0.11
PHGDH-234ENST00000642041 NDUFA2O43678 99 aa14.39□□□□□ -0.11
PHGDH-234ENST00000642041 IFNA21P01568 189 aa14.39□□□□□ -0.11
PHGDH-234ENST00000642041 WNT2P09544 360 aa14.39□□□□□ -0.11
PHGDH-234ENST00000642041 VAMP1P23763 118 aa14.39□□□□□ -0.11
PHGDH-234ENST00000642041 PRDX2P32119 198 aa14.39□□□□□ -0.11
PHGDH-234ENST00000642041 NPY4RP50391 375 aa14.39□□□□□ -0.11
PHGDH-234ENST00000642041 ADIPOQQ15848 244 aa14.39□□□□□ -0.11
PHGDH-234ENST00000642041 FYTTD1Q96QD9 318 aaKnown RBP14.39□□□□□ -0.11
PHGDH-234ENST00000642041 C5orf66Q9H5L9 145 aa14.39□□□□□ -0.11
PHGDH-234ENST00000642041 LPAR3Q9UBY5 353 aa14.39□□□□□ -0.11
PHGDH-234ENST00000642041 PAIP2BQ9ULR5 123 aaKnown RBP14.39□□□□□ -0.11
PHGDH-234ENST00000642041 TRBV6-7A0A0A0MS04 114 aa14.38□□□□□ -0.11
PHGDH-234ENST00000642041 TEX13DA0A0J9YY54 714 aaPredicted RBP14.38□□□□□ -0.11
PHGDH-234ENST00000642041 DUXBA0A1W2PPF3 345 aa14.38□□□□□ -0.11
PHGDH-234ENST00000642041 ZSCAN5BA6NJL1 495 aa14.38□□□□□ -0.11
PHGDH-234ENST00000642041 SPRY3O43610 288 aa14.38□□□□□ -0.11
PHGDH-234ENST00000642041 PPYP01298 95 aa14.38□□□□□ -0.11
PHGDH-234ENST00000642041 IGHV1-46P01743 117 aa14.38□□□□□ -0.11
PHGDH-234ENST00000642041 PPP1R1AQ13522 171 aa14.38□□□□□ -0.11
PHGDH-234ENST00000642041 GSG1LQ6UXU4 331 aa14.38□□□□□ -0.11
PHGDH-234ENST00000642041 ZBTB8BQ8NAP8 495 aaPredicted RBP14.38□□□□□ -0.11
PHGDH-234ENST00000642041 OR5M8Q8NGP6 311 aa14.38□□□□□ -0.11
PHGDH-234ENST00000642041 OR2T35Q8NGX2 323 aa14.38□□□□□ -0.11
PHGDH-234ENST00000642041 GALMQ96C23 342 aa14.38□□□□□ -0.11
PHGDH-234ENST00000642041 RTBDNQ9BSG5 229 aaPredicted RBP14.38□□□□□ -0.11
PHGDH-234ENST00000642041 HDHD3Q9BSH5 251 aaPredicted RBP14.38□□□□□ -0.11
PHGDH-234ENST00000642041 RSRP1Q9BUV0 290 aa14.38□□□□□ -0.11
PHGDH-234ENST00000642041 TOLLIPQ9H0E2 274 aa14.38□□□□□ -0.11
PHGDH-234ENST00000642041 SLA2Q9H6Q3 261 aa14.38□□□□□ -0.11
PHGDH-234ENST00000642041 OR6C3Q9NZP0 311 aa14.38□□□□□ -0.11
PHGDH-234ENST00000642041 FZR1Q9UM11 496 aa14.38□□□□□ -0.11
PHGDH-234ENST00000642041 DYSFO75923 2080 aa14.37□□□□□ -0.11
PHGDH-234ENST00000642041 TRAV38-1A0A0B4J264 116 aa14.37□□□□□ -0.11
PHGDH-234ENST00000642041 TUSC2O75896 110 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 199.9 ms