RNA–Protein interactions for RNA: ENST00000637572.1

CHD2-227, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5

Gene CHD2, Length 4,452 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-227ENST00000637572 CT45A5P0DMU8 189 aa4.74□□□□□ -1.65
CHD2-227ENST00000637572 CT45A7P0DMV0 189 aa4.74□□□□□ -1.65
CHD2-227ENST00000637572 CEBPGP53567 150 aa4.74□□□□□ -1.65
CHD2-227ENST00000637572 RPL31P62899 125 aaKnown RBP4.74□□□□□ -1.65
CHD2-227ENST00000637572 MRPS11P82912 194 aaKnown RBP4.74□□□□□ -1.65
CHD2-227ENST00000637572 FAM27E3Q08E93 113 aa4.74□□□□□ -1.65
CHD2-227ENST00000637572 TSC22D1Q15714 1073 aa4.74□□□□□ -1.65
CHD2-227ENST00000637572 CT45A1Q5HYN5 189 aa4.74□□□□□ -1.65
CHD2-227ENST00000637572 SHEQ5VZ18 495 aa4.74□□□□□ -1.65
CHD2-227ENST00000637572 TCTE3Q8IZS6 198 aa4.74□□□□□ -1.65
CHD2-227ENST00000637572 LYG1Q8N1E2 194 aa4.74□□□□□ -1.65
CHD2-227ENST00000637572 OR10P1Q8NGE3 313 aa4.74□□□□□ -1.65
CHD2-227ENST00000637572 CT45A3Q8NHU0 189 aa4.74□□□□□ -1.65
CHD2-227ENST00000637572 NTNG2Q96CW9 530 aa4.74□□□□□ -1.65
CHD2-227ENST00000637572 SPRY4Q9C004 299 aa4.74□□□□□ -1.65
CHD2-227ENST00000637572 HIVEP2P31629 2446 aa4.74□□□□□ -1.65
CHD2-227ENST00000637572 KIF26AQ9ULI4 1882 aaPredicted RBP4.74□□□□□ -1.65
CHD2-227ENST00000637572 TLN2Q9Y4G6 2542 aa4.73□□□□□ -1.65
CHD2-227ENST00000637572 SCN8AQ9UQD0 1980 aa4.73□□□□□ -1.65
CHD2-227ENST00000637572 C3orf85A0A1B0GTC6 90 aa4.73□□□□□ -1.65
CHD2-227ENST00000637572 PPYP01298 95 aa4.73□□□□□ -1.65
CHD2-227ENST00000637572 FGF2P09038 288 aa4.73□□□□□ -1.65
CHD2-227ENST00000637572 CA7P43166 264 aa4.73□□□□□ -1.65
CHD2-227ENST00000637572 PDLIM4P50479 330 aa4.73□□□□□ -1.65
CHD2-227ENST00000637572 CCL8P80075 99 aa4.73□□□□□ -1.65
CHD2-227ENST00000637572 PXDC1Q5TGL8 231 aa4.73□□□□□ -1.65
CHD2-227ENST00000637572 ELP2Q6IA86 826 aa4.73□□□□□ -1.65
CHD2-227ENST00000637572 LFNGQ8NES3 379 aa4.73□□□□□ -1.65
CHD2-227ENST00000637572 FAM216AQ8WUB2 273 aa4.73□□□□□ -1.65
CHD2-227ENST00000637572 MRPL24Q96A35 216 aaKnown RBP4.73□□□□□ -1.65
CHD2-227ENST00000637572 RBMXL1Q96E39 390 aaKnown RBP4.73□□□□□ -1.65
CHD2-227ENST00000637572 Q96M66 194 aa4.73□□□□□ -1.65
CHD2-227ENST00000637572 PIMREGQ9BSJ6 248 aa4.73□□□□□ -1.65
CHD2-227ENST00000637572 EIF5A2Q9GZV4 153 aaKnown RBP4.73□□□□□ -1.65
CHD2-227ENST00000637572 FAM234AQ9H0X4 552 aa4.73□□□□□ -1.65
CHD2-227ENST00000637572 DKK4Q9UBT3 224 aa4.73□□□□□ -1.65
CHD2-227ENST00000637572 PTPRSQ13332 1948 aa4.73□□□□□ -1.65
CHD2-227ENST00000637572 BOLA2-SMG1P6H3BVE0 249 aa4.73□□□□□ -1.65
CHD2-227ENST00000637572 SPDEFO95238 335 aa4.73□□□□□ -1.65
CHD2-227ENST00000637572 GOSR1O95249 250 aa4.73□□□□□ -1.65
CHD2-227ENST00000637572 CRYGSP22914 178 aa4.73□□□□□ -1.65
CHD2-227ENST00000637572 MPV17P39210 176 aa4.73□□□□□ -1.65
CHD2-227ENST00000637572 KIR2DL2P43627 348 aaPredicted RBP4.73□□□□□ -1.65
CHD2-227ENST00000637572 KLF9Q13886 244 aaPredicted RBP4.73□□□□□ -1.65
CHD2-227ENST00000637572 HNF4GQ14541 408 aa4.73□□□□□ -1.65
CHD2-227ENST00000637572 PEA15Q15121 130 aa4.73□□□□□ -1.65
CHD2-227ENST00000637572 RHEBQ15382 184 aa4.73□□□□□ -1.65
CHD2-227ENST00000637572 UBE2V2Q15819 145 aa4.73□□□□□ -1.65
CHD2-227ENST00000637572 ZNF260Q3ZCT1 412 aa4.73□□□□□ -1.65
CHD2-227ENST00000637572 AKIRIN2Q53H80 203 aa4.73□□□□□ -1.65
CHD2-227ENST00000637572 DMRTC1Q5HYR2 192 aa4.73□□□□□ -1.65
CHD2-227ENST00000637572 HIST2H2BCQ6DN03 193 aa4.73□□□□□ -1.65
CHD2-227ENST00000637572 ETFRF1Q6IPR1 90 aa4.73□□□□□ -1.65
CHD2-227ENST00000637572 TM2D1Q9BX74 207 aa4.73□□□□□ -1.65
CHD2-227ENST00000637572 PSG11Q9UQ72 335 aa4.73□□□□□ -1.65
CHD2-227ENST00000637572 J3KRW8 73 aa4.73□□□□□ -1.65
CHD2-227ENST00000637572 FCGR3AP08637 254 aa4.73□□□□□ -1.65
CHD2-227ENST00000637572 HNF1AP20823 631 aa4.73□□□□□ -1.65
CHD2-227ENST00000637572 VDAC1P21796 283 aa4.73□□□□□ -1.65
CHD2-227ENST00000637572 RAB5CP51148 216 aa4.73□□□□□ -1.65
CHD2-227ENST00000637572 COL10A1Q03692 680 aa4.73□□□□□ -1.65
CHD2-227ENST00000637572 DHRS2Q13268 280 aa4.73□□□□□ -1.65
CHD2-227ENST00000637572 PIGYQ3MUY2 71 aa4.73□□□□□ -1.65
CHD2-227ENST00000637572 RNFT1Q5M7Z0 435 aa4.73□□□□□ -1.65
CHD2-227ENST00000637572 Q6ZRG5 221 aa4.73□□□□□ -1.65
CHD2-227ENST00000637572 MOB3BQ86TA1 216 aa4.73□□□□□ -1.65
CHD2-227ENST00000637572 CADM3Q8N126 398 aa4.73□□□□□ -1.65
CHD2-227ENST00000637572 ZNF843Q8N446 348 aa4.73□□□□□ -1.65
CHD2-227ENST00000637572 RBMXL3Q8N7X1 1067 aaKnown RBP4.73□□□□□ -1.65
CHD2-227ENST00000637572 SSC4DQ8WTU2 575 aa4.73□□□□□ -1.65
CHD2-227ENST00000637572 AQP3Q92482 292 aa4.73□□□□□ -1.65
CHD2-227ENST00000637572 GTF3AQ92664 365 aaKnown RBP4.73□□□□□ -1.65
CHD2-227ENST00000637572 STARD4Q96DR4 205 aa4.73□□□□□ -1.65
CHD2-227ENST00000637572 MEGF10Q96KG7 1140 aa4.73□□□□□ -1.65
CHD2-227ENST00000637572 ZNF714Q96N38 554 aa4.73□□□□□ -1.65
CHD2-227ENST00000637572 OR2D2Q9H210 308 aa4.73□□□□□ -1.65
CHD2-227ENST00000637572 SETD2Q9BYW2 2564 aaPredicted RBP4.73□□□□□ -1.65
CHD2-227ENST00000637572 ZNF106Q9H2Y7 1883 aaKnown RBP4.73□□□□□ -1.65
CHD2-227ENST00000637572 SCN2AQ99250 2005 aa4.73□□□□□ -1.65
CHD2-227ENST00000637572 CFAP54Q96N23 3096 aa4.72□□□□□ -1.65
CHD2-227ENST00000637572 IGHV1-69-2A0A0G2JMI3 117 aa4.72□□□□□ -1.65
CHD2-227ENST00000637572 A0A1B0GTI1 187 aa4.72□□□□□ -1.65
CHD2-227ENST00000637572 I3L521 148 aa4.72□□□□□ -1.65
CHD2-227ENST00000637572 RAB27BO00194 218 aa4.72□□□□□ -1.65
CHD2-227ENST00000637572 OR2H2O95918 312 aa4.72□□□□□ -1.65
CHD2-227ENST00000637572 COL8A1P27658 744 aa4.72□□□□□ -1.65
CHD2-227ENST00000637572 PPT1P50897 306 aa4.72□□□□□ -1.65
CHD2-227ENST00000637572 KIR3DS1Q14943 382 aa4.72□□□□□ -1.65
CHD2-227ENST00000637572 KHDC1LQ5JSQ8 128 aa4.72□□□□□ -1.65
CHD2-227ENST00000637572 GPR157Q5UAW9 335 aa4.72□□□□□ -1.65
CHD2-227ENST00000637572 MBNL2Q5VZF2 373 aaKnown RBP4.72□□□□□ -1.65
CHD2-227ENST00000637572 ZNF66Q6ZN08 573 aa4.72□□□□□ -1.65
CHD2-227ENST00000637572 SLC25A42Q86VD7 318 aa4.72□□□□□ -1.65
CHD2-227ENST00000637572 POC1AQ8NBT0 407 aa4.72□□□□□ -1.65
CHD2-227ENST00000637572 RBPMSQ93062 196 aaKnown RBP4.72□□□□□ -1.65
CHD2-227ENST00000637572 NABP1Q96AH0 204 aa4.72□□□□□ -1.65
CHD2-227ENST00000637572 TMEM68Q96MH6 324 aa4.72□□□□□ -1.65
CHD2-227ENST00000637572 ZMAT4Q9H898 229 aa4.72□□□□□ -1.65
CHD2-227ENST00000637572 THYN1Q9P016 225 aa4.72□□□□□ -1.65
CHD2-227ENST00000637572 ZNF230Q9UIE0 474 aaPredicted RBP4.72□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 95.8 ms